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The map label for this gene is 52842183

Identifier: 52842183

GI number: 52842183

Start: 2204165

End: 2205730

Strand: Reverse

Name: 52842183

Synonym: lpg1966

Alternate gene names: NA

Gene position: 2205730-2204165 (Counterclockwise)

Preceding gene: 52842186

Following gene: 52842182

Centisome position: 64.92

GC content: 33.21

Gene sequence:

>1566_bases
ATGATAAAGGACATTCTCAATACCATAGCCAGCCTCGTTGAGGAAAACGTAGTGGTATTTGCAAGTGAACGTGGAAAACA
ACTTTTACAGAAAGTTAAAGCCGATCTTGTATCGTTTAAACCAATTAATTTTTATGCATTGGATGCGGGAAAACAAATAA
CAGACGCGCTTAAACTAATAGAGAGCTATTGCATTGAAATGAACAGAATATTTGATGAATTAAATCATCAATCTTCAGTT
TCTTTAGCCAATGAAAAATTAACTCATAAAATAAAAAACATTTTAACCAACTTAAAAAACAAACAAAATAAAATAACCCA
GTTACGAGAAAAAATTCCAGAGGGCATGCTTGATATCAAGCGAGCATTGTATATTGTAGAAAATTCTTTTCTTAGCGAAT
CAGAACCAGAGGAAAAAGAACTGAGATCAAAATTTAAGCGCATTAAAAAATTTATGAGTAATTCAAATAAGGAATATCTT
GATTTAATTAAAAAGGGAGGATTACTTAACACTGTTTTACTGGATACCACCACTTTGTATTGGAACCAATTACACGAATA
CTCAACATTATTAAATCAGTGTCGTATTACTTTACAAAAATCTCATCATCTTACCAAAGAAGGGCAATTAGCGCTCCGCT
GTTTTAATAGTGCGATTCAGAAAATGCCACCAAAGAAACATATCATTAATGCGTTAAAAATATTGAACAAGCCAAATAGC
AAGACAGAAGCGATTGAAAAAATAGGCTTTGTTTCACCTCATGGTAGGGAAGCCTGTATGCAACTAACTTGTTGGGGGAA
AAAATTTTTTTATATACCTCGTAGCGAAGAAATGTATCATTTTGATTATGATCCTAAAGAAGATTTGAATGAGACTGGGG
GTAACTGTTTTGGTGAGTCAATGATGTTTATTCATTTCTTATCCAAGGGAGCCATCAGATGGTTGTGTCCCGAAGCAGGG
TTAATTAATTTTCAGTTAGATCAAACAAGAAATTTAAAGTTTAAAAAGGCAACCTTAGGCGAAGGGGAAACATTGGTATC
GGATAACAGTCCCCATGATTCATTAGAATGGGAAGATATGAGGCCTGTGCTTTTGGATAATCCTTACTTTAAACCAGGCA
GTCTTTGTGGTGTCATATTCTCAATGAATGATTACACGAAAGCAAAAAGAGAGTTTACAGCAGGGCATATGATAGTAGTT
GCCAAGCTGGATACTAACTTGAATCCATACAAATACATTATATATGAAAAAGATTTTGGTGCATTTGGATTAACTGATGA
TGAATCTTTGGAATACCTAATCAGTGAACAAATATTACCACTCTATAGAGGGATGAATTATTCAAAAATTAAATTGGTTA
AATATGGTGAGGCTTCAACTGAGACCTATGATCTTTTAAATAAAATTAAGCCTCAGACAGGTATTCCACAAAAAGAGTCG
ACAGCCAGTGATTCTATAAATACCTATTTTGATAATGCATTTTTTAAACTTTCTAAGGAAACTAATAAAGAGAATGTAAT
TGATCAAGTCAATCAAACGGATGTGTTTGGGTTTTGCAGAAACTAA

Upstream 100 bases:

>100_bases
AAATTTATGAATAATTAACCCAGAAAGTACTTGCTTTATTCAATCTGTACAGGTATTTCTATTCAATCAAAGCCCATTCT
ATTGAGTAAGAGAGTATTAA

Downstream 100 bases:

>100_bases
ACCAAAATCTTACTGTGTGCTTTTAAGGAACTCCAAAAACCTATGAAACAAAGAGAGAGCTATGCTTAGCTCCAGAGTCA
ATATCTATTTTCTAATTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MIKDILNTIASLVEENVVVFASERGKQLLQKVKADLVSFKPINFYALDAGKQITDALKLIESYCIEMNRIFDELNHQSSV
SLANEKLTHKIKNILTNLKNKQNKITQLREKIPEGMLDIKRALYIVENSFLSESEPEEKELRSKFKRIKKFMSNSNKEYL
DLIKKGGLLNTVLLDTTTLYWNQLHEYSTLLNQCRITLQKSHHLTKEGQLALRCFNSAIQKMPPKKHIINALKILNKPNS
KTEAIEKIGFVSPHGREACMQLTCWGKKFFYIPRSEEMYHFDYDPKEDLNETGGNCFGESMMFIHFLSKGAIRWLCPEAG
LINFQLDQTRNLKFKKATLGEGETLVSDNSPHDSLEWEDMRPVLLDNPYFKPGSLCGVIFSMNDYTKAKREFTAGHMIVV
AKLDTNLNPYKYIIYEKDFGAFGLTDDESLEYLISEQILPLYRGMNYSKIKLVKYGEASTETYDLLNKIKPQTGIPQKES
TASDSINTYFDNAFFKLSKETNKENVIDQVNQTDVFGFCRN

Sequences:

>Translated_521_residues
MIKDILNTIASLVEENVVVFASERGKQLLQKVKADLVSFKPINFYALDAGKQITDALKLIESYCIEMNRIFDELNHQSSV
SLANEKLTHKIKNILTNLKNKQNKITQLREKIPEGMLDIKRALYIVENSFLSESEPEEKELRSKFKRIKKFMSNSNKEYL
DLIKKGGLLNTVLLDTTTLYWNQLHEYSTLLNQCRITLQKSHHLTKEGQLALRCFNSAIQKMPPKKHIINALKILNKPNS
KTEAIEKIGFVSPHGREACMQLTCWGKKFFYIPRSEEMYHFDYDPKEDLNETGGNCFGESMMFIHFLSKGAIRWLCPEAG
LINFQLDQTRNLKFKKATLGEGETLVSDNSPHDSLEWEDMRPVLLDNPYFKPGSLCGVIFSMNDYTKAKREFTAGHMIVV
AKLDTNLNPYKYIIYEKDFGAFGLTDDESLEYLISEQILPLYRGMNYSKIKLVKYGEASTETYDLLNKIKPQTGIPQKES
TASDSINTYFDNAFFKLSKETNKENVIDQVNQTDVFGFCRN
>Mature_521_residues
MIKDILNTIASLVEENVVVFASERGKQLLQKVKADLVSFKPINFYALDAGKQITDALKLIESYCIEMNRIFDELNHQSSV
SLANEKLTHKIKNILTNLKNKQNKITQLREKIPEGMLDIKRALYIVENSFLSESEPEEKELRSKFKRIKKFMSNSNKEYL
DLIKKGGLLNTVLLDTTTLYWNQLHEYSTLLNQCRITLQKSHHLTKEGQLALRCFNSAIQKMPPKKHIINALKILNKPNS
KTEAIEKIGFVSPHGREACMQLTCWGKKFFYIPRSEEMYHFDYDPKEDLNETGGNCFGESMMFIHFLSKGAIRWLCPEAG
LINFQLDQTRNLKFKKATLGEGETLVSDNSPHDSLEWEDMRPVLLDNPYFKPGSLCGVIFSMNDYTKAKREFTAGHMIVV
AKLDTNLNPYKYIIYEKDFGAFGLTDDESLEYLISEQILPLYRGMNYSKIKLVKYGEASTETYDLLNKIKPQTGIPQKES
TASDSINTYFDNAFFKLSKETNKENVIDQVNQTDVFGFCRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59955; Mature: 59955

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDILNTIASLVEENVVVFASERGKQLLQKVKADLVSFKPINFYALDAGKQITDALKLI
CHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
ESYCIEMNRIFDELNHQSSVSLANEKLTHKIKNILTNLKNKQNKITQLREKIPEGMLDIK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RALYIVENSFLSESEPEEKELRSKFKRIKKFMSNSNKEYLDLIKKGGLLNTVLLDTTTLY
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEHHHHHHHHH
WNQLHEYSTLLNQCRITLQKSHHLTKEGQLALRCFNSAIQKMPPKKHIINALKILNKPNS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH
KTEAIEKIGFVSPHGREACMQLTCWGKKFFYIPRSEEMYHFDYDPKEDLNETGGNCFGES
HHHHHHHHCCCCCCCHHHHHHHEECCCEEEEECCCCCEEECCCCCHHHHHHCCCCHHHHH
MMFIHFLSKGAIRWLCPEAGLINFQLDQTRNLKFKKATLGEGETLVSDNSPHDSLEWEDM
HHHHHHHHCCCEEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCC
RPVLLDNPYFKPGSLCGVIFSMNDYTKAKREFTAGHMIVVAKLDTNLNPYKYIIYEKDFG
CCEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCC
AFGLTDDESLEYLISEQILPLYRGMNYSKIKLVKYGEASTETYDLLNKIKPQTGIPQKES
CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC
TASDSINTYFDNAFFKLSKETNKENVIDQVNQTDVFGFCRN
CCCCCHHHHHCCHHEEECCCCCHHHHHHHCCCCCHHEECCC
>Mature Secondary Structure
MIKDILNTIASLVEENVVVFASERGKQLLQKVKADLVSFKPINFYALDAGKQITDALKLI
CHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
ESYCIEMNRIFDELNHQSSVSLANEKLTHKIKNILTNLKNKQNKITQLREKIPEGMLDIK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RALYIVENSFLSESEPEEKELRSKFKRIKKFMSNSNKEYLDLIKKGGLLNTVLLDTTTLY
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEHHHHHHHHH
WNQLHEYSTLLNQCRITLQKSHHLTKEGQLALRCFNSAIQKMPPKKHIINALKILNKPNS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH
KTEAIEKIGFVSPHGREACMQLTCWGKKFFYIPRSEEMYHFDYDPKEDLNETGGNCFGES
HHHHHHHHCCCCCCCHHHHHHHEECCCEEEEECCCCCEEECCCCCHHHHHHCCCCHHHHH
MMFIHFLSKGAIRWLCPEAGLINFQLDQTRNLKFKKATLGEGETLVSDNSPHDSLEWEDM
HHHHHHHHCCCEEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCC
RPVLLDNPYFKPGSLCGVIFSMNDYTKAKREFTAGHMIVVAKLDTNLNPYKYIIYEKDFG
CCEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCC
AFGLTDDESLEYLISEQILPLYRGMNYSKIKLVKYGEASTETYDLLNKIKPQTGIPQKES
CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC
TASDSINTYFDNAFFKLSKETNKENVIDQVNQTDVFGFCRN
CCCCCHHHHHCCHHEEECCCCCHHHHHHHCCCCCHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA