Click here to switch to the map view.

The map label for this gene is 52842180

Identifier: 52842180

GI number: 52842180

Start: 2196799

End: 2198898

Strand: Reverse

Name: 52842180

Synonym: lpg1963

Alternate gene names: NA

Gene position: 2198898-2196799 (Counterclockwise)

Preceding gene: 52842182

Following gene: 52842178

Centisome position: 64.72

GC content: 30.38

Gene sequence:

>2100_bases
ATGCAAGAAAAAATTATCAACTTAGGGAAAGGGCTTAAAAAGGTTAATGAAGGCATTAAAAAACATATTTCCCGAGCAGA
AGAGTTCCTCTACTTGGCGAACCAATGGGAAAAAGAGAATATTAAGATTAATGATTTATTGAATGGAGTGCAGTTTACAG
TTAATGATAAAAAAATGTCGGGTCAAGAAATTAAAGAAGAACTATCTAATCTAATAGAAAGATATAATAATTTTCTAAAA
AAAAACTTAAAAGGGGAAAGAAGCGAAACATTAGAACTAAAGGAGATTCAGCAACAACTTACTAATTTATACAATGCTGT
TAATGATATTTATACTTATTTATCCATAAATAAAACAGAGTTTTTTCTCGAAGCAATCAAGTCTTGCTATAAAAAAGATC
AGAGGATGGGTAGTACAATCCAGTTTGTGCTGAAGATCGCGGATCATCTTTCTAAGGAGAGACTGCAATTTAATTTGAAT
TTAAATTCGCAATTTGCAGAAGCCTCCGAGAGTTTTCAGGAGGTAACTACCAAATTTTACAGAGAGGTTGCTACTCCTAG
AATAGAATCTGCACAAAAATTGTTGGAATTGATGAATAATTTCGTAGACCAATATATATCACAAGGAGCAAGTCCAGAAG
ATGCAATAAAAAAACTTAAGCCATTTGAGAAATATTTTACTATTGAAATCTCGCATTATGAAGAGTTTGGGCATTTAGTA
TATAAAACAAACTTTAATTGTAATCCAGCGCTATTTGATGTTAACCCCATTGAATTTTTAAATGAATTATTTGTGCAATT
TTATAAAGACACCACTTTATCATCTCGCTCTAAAACAGCTTTAAAACAAGTGCTTGATAAATTTGAGATTACTTATGAGG
TGCCAAAGACATGGTATGGTTATATTGGCTGGGATATCCCTATAGTAACTGATAAAAATTCAGTATTAGTTACTTATGAC
AAACAAGCTTATTACAGATATCATCAAGAAAGCGGCCAGAGAGAAATGGAGTTTTTTGAGACAATTGAGCGCTGTTTGGA
TAAGTCGAAAGACATTATTATTGCGACTAAAAAGGAAAATTTAAAAGACCAAAAAGAGTTTTCTAAATTGATAGATAAGG
CTATTAAGGAGTTAGAAGAAACAAAAAAGAAAAGAATTTTTCAAAAGGAGCCGCATGAATTGGTAACAAGTATTATCAAT
AAATCAATAAAGTTGCTGCAAGACTTGAAAAATAATATGCCATTAAGACGAGAAGATTTGGTCATGGTAATCTTAAGTAC
TGAAAATGCTTTAAATGCAGCAAAATCAAAATTAAAGCCACAAGAAATCAATTTATCCGAACCGGAAAAATGCATTAAAA
ATTTTAAAAAGATATTAGCAATAAAACAGAAAGAAGAGCTTTGTTTTTATAAATCAGATGAAGAACAATCTATTTTCTCC
AAACACATAAATTCTGAGCTTAGAGAACTTGTCGAATCTTACCAGGTTCAAAAGAGAAGTGAAAAAGAGTTGGTTATTGA
GCCAGAAAAAATGAATTCACCACAGAGAATAGAACCAAAAGAAGAAGATAAAAAGATTGATTTAAATAAGAAAATGAATT
TATACCGTGTTCAAAAAATTATGAAAAATTTTGTATTTGAGTATTGCGGGTATAAGGGAGGGAAAAAAGTAAAAGAGGGA
GGAGCAACAATAGAAGAACTTAAAAATAAACTCAAAGATTTTAGAGATTATTTTCAAATAGAGATAGTGATGAATGATAA
AAGTGGTTCAGAAGAACTCAATATCATATTCAACTATCAAAACATCAAGAATAAAAATCCACATGATTTATTTAATGAGC
TCTTTAAAAAATTTACCGAAGACATAGGATATTCTGGTATGGGTTCACGATCAATCGAGGCTCTTAAAAGAGCATTAGCT
AAAAATAATATCACTTATACCAATGGATATTATGGAAAAACAGCGACTTTAACAAGCCTATTATGGAGTAAAGAGCCACC
TGTTATTACTGATGAAAAAAATATATTTAAATTATCCGATGAAAAGCATTTAAGTGAGAATAAGGAAGATATTCGCGGAA
AAGGAATTACGAATATCTAG

Upstream 100 bases:

>100_bases
CATTGCGTTTATGAAAAATAATATGATTAAAAATTAATTTAATTGTTTATTAAATTAACTATAATTAAAAAATAAGTCAC
ATTGAACCTGGAATTATGTA

Downstream 100 bases:

>100_bases
TCCTTACATACCCATATTTCGAATTTTAATTGGCTTACACAATATCACAAGAGTTGGTATCACATTTACTTTTGAATGGT
AATATTTTCAATGACTACAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 699; Mature: 699

Protein sequence:

>699_residues
MQEKIINLGKGLKKVNEGIKKHISRAEEFLYLANQWEKENIKINDLLNGVQFTVNDKKMSGQEIKEELSNLIERYNNFLK
KNLKGERSETLELKEIQQQLTNLYNAVNDIYTYLSINKTEFFLEAIKSCYKKDQRMGSTIQFVLKIADHLSKERLQFNLN
LNSQFAEASESFQEVTTKFYREVATPRIESAQKLLELMNNFVDQYISQGASPEDAIKKLKPFEKYFTIEISHYEEFGHLV
YKTNFNCNPALFDVNPIEFLNELFVQFYKDTTLSSRSKTALKQVLDKFEITYEVPKTWYGYIGWDIPIVTDKNSVLVTYD
KQAYYRYHQESGQREMEFFETIERCLDKSKDIIIATKKENLKDQKEFSKLIDKAIKELEETKKKRIFQKEPHELVTSIIN
KSIKLLQDLKNNMPLRREDLVMVILSTENALNAAKSKLKPQEINLSEPEKCIKNFKKILAIKQKEELCFYKSDEEQSIFS
KHINSELRELVESYQVQKRSEKELVIEPEKMNSPQRIEPKEEDKKIDLNKKMNLYRVQKIMKNFVFEYCGYKGGKKVKEG
GATIEELKNKLKDFRDYFQIEIVMNDKSGSEELNIIFNYQNIKNKNPHDLFNELFKKFTEDIGYSGMGSRSIEALKRALA
KNNITYTNGYYGKTATLTSLLWSKEPPVITDEKNIFKLSDEKHLSENKEDIRGKGITNI

Sequences:

>Translated_699_residues
MQEKIINLGKGLKKVNEGIKKHISRAEEFLYLANQWEKENIKINDLLNGVQFTVNDKKMSGQEIKEELSNLIERYNNFLK
KNLKGERSETLELKEIQQQLTNLYNAVNDIYTYLSINKTEFFLEAIKSCYKKDQRMGSTIQFVLKIADHLSKERLQFNLN
LNSQFAEASESFQEVTTKFYREVATPRIESAQKLLELMNNFVDQYISQGASPEDAIKKLKPFEKYFTIEISHYEEFGHLV
YKTNFNCNPALFDVNPIEFLNELFVQFYKDTTLSSRSKTALKQVLDKFEITYEVPKTWYGYIGWDIPIVTDKNSVLVTYD
KQAYYRYHQESGQREMEFFETIERCLDKSKDIIIATKKENLKDQKEFSKLIDKAIKELEETKKKRIFQKEPHELVTSIIN
KSIKLLQDLKNNMPLRREDLVMVILSTENALNAAKSKLKPQEINLSEPEKCIKNFKKILAIKQKEELCFYKSDEEQSIFS
KHINSELRELVESYQVQKRSEKELVIEPEKMNSPQRIEPKEEDKKIDLNKKMNLYRVQKIMKNFVFEYCGYKGGKKVKEG
GATIEELKNKLKDFRDYFQIEIVMNDKSGSEELNIIFNYQNIKNKNPHDLFNELFKKFTEDIGYSGMGSRSIEALKRALA
KNNITYTNGYYGKTATLTSLLWSKEPPVITDEKNIFKLSDEKHLSENKEDIRGKGITNI
>Mature_699_residues
MQEKIINLGKGLKKVNEGIKKHISRAEEFLYLANQWEKENIKINDLLNGVQFTVNDKKMSGQEIKEELSNLIERYNNFLK
KNLKGERSETLELKEIQQQLTNLYNAVNDIYTYLSINKTEFFLEAIKSCYKKDQRMGSTIQFVLKIADHLSKERLQFNLN
LNSQFAEASESFQEVTTKFYREVATPRIESAQKLLELMNNFVDQYISQGASPEDAIKKLKPFEKYFTIEISHYEEFGHLV
YKTNFNCNPALFDVNPIEFLNELFVQFYKDTTLSSRSKTALKQVLDKFEITYEVPKTWYGYIGWDIPIVTDKNSVLVTYD
KQAYYRYHQESGQREMEFFETIERCLDKSKDIIIATKKENLKDQKEFSKLIDKAIKELEETKKKRIFQKEPHELVTSIIN
KSIKLLQDLKNNMPLRREDLVMVILSTENALNAAKSKLKPQEINLSEPEKCIKNFKKILAIKQKEELCFYKSDEEQSIFS
KHINSELRELVESYQVQKRSEKELVIEPEKMNSPQRIEPKEEDKKIDLNKKMNLYRVQKIMKNFVFEYCGYKGGKKVKEG
GATIEELKNKLKDFRDYFQIEIVMNDKSGSEELNIIFNYQNIKNKNPHDLFNELFKKFTEDIGYSGMGSRSIEALKRALA
KNNITYTNGYYGKTATLTSLLWSKEPPVITDEKNIFKLSDEKHLSENKEDIRGKGITNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82068; Mature: 82068

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEKIINLGKGLKKVNEGIKKHISRAEEFLYLANQWEKENIKINDLLNGVQFTVNDKKMS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCEEEECCCCCC
GQEIKEELSNLIERYNNFLKKNLKGERSETLELKEIQQQLTNLYNAVNDIYTYLSINKTE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FFLEAIKSCYKKDQRMGSTIQFVLKIADHLSKERLQFNLNLNSQFAEASESFQEVTTKFY
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHH
REVATPRIESAQKLLELMNNFVDQYISQGASPEDAIKKLKPFEKYFTIEISHYEEFGHLV
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHEEEEEECHHHHCCEE
YKTNFNCNPALFDVNPIEFLNELFVQFYKDTTLSSRSKTALKQVLDKFEITYEVPKTWYG
EEECCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCC
YIGWDIPIVTDKNSVLVTYDKQAYYRYHQESGQREMEFFETIERCLDKSKDIIIATKKEN
EECCEEEEEECCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
LKDQKEFSKLIDKAIKELEETKKKRIFQKEPHELVTSIINKSIKLLQDLKNNMPLRREDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VMVILSTENALNAAKSKLKPQEINLSEPEKCIKNFKKILAIKQKEELCFYKSDEEQSIFS
EEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHH
KHINSELRELVESYQVQKRSEKELVIEPEKMNSPQRIEPKEEDKKIDLNKKMNLYRVQKI
HHHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
MKNFVFEYCGYKGGKKVKEGGATIEELKNKLKDFRDYFQIEIVMNDKSGSEELNIIFNYQ
HHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCEEEEEEEC
NIKNKNPHDLFNELFKKFTEDIGYSGMGSRSIEALKRALAKNNITYTNGYYGKTATLTSL
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHH
LWSKEPPVITDEKNIFKLSDEKHLSENKEDIRGKGITNI
HHCCCCCCCCCCCCCEECCCHHHHCCCHHHHCCCCCCCC
>Mature Secondary Structure
MQEKIINLGKGLKKVNEGIKKHISRAEEFLYLANQWEKENIKINDLLNGVQFTVNDKKMS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCEEEECCCCCC
GQEIKEELSNLIERYNNFLKKNLKGERSETLELKEIQQQLTNLYNAVNDIYTYLSINKTE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FFLEAIKSCYKKDQRMGSTIQFVLKIADHLSKERLQFNLNLNSQFAEASESFQEVTTKFY
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHH
REVATPRIESAQKLLELMNNFVDQYISQGASPEDAIKKLKPFEKYFTIEISHYEEFGHLV
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHEEEEEECHHHHCCEE
YKTNFNCNPALFDVNPIEFLNELFVQFYKDTTLSSRSKTALKQVLDKFEITYEVPKTWYG
EEECCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCC
YIGWDIPIVTDKNSVLVTYDKQAYYRYHQESGQREMEFFETIERCLDKSKDIIIATKKEN
EECCEEEEEECCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
LKDQKEFSKLIDKAIKELEETKKKRIFQKEPHELVTSIINKSIKLLQDLKNNMPLRREDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VMVILSTENALNAAKSKLKPQEINLSEPEKCIKNFKKILAIKQKEELCFYKSDEEQSIFS
EEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHH
KHINSELRELVESYQVQKRSEKELVIEPEKMNSPQRIEPKEEDKKIDLNKKMNLYRVQKI
HHHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
MKNFVFEYCGYKGGKKVKEGGATIEELKNKLKDFRDYFQIEIVMNDKSGSEELNIIFNYQ
HHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCEEEEEEEC
NIKNKNPHDLFNELFKKFTEDIGYSGMGSRSIEALKRALAKNNITYTNGYYGKTATLTSL
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHH
LWSKEPPVITDEKNIFKLSDEKHLSENKEDIRGKGITNI
HHCCCCCCCCCCCCCEECCCHHHHCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA