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The map label for this gene is 52842154

Identifier: 52842154

GI number: 52842154

Start: 2162633

End: 2163694

Strand: Reverse

Name: 52842154

Synonym: lpg1937

Alternate gene names: NA

Gene position: 2163694-2162633 (Counterclockwise)

Preceding gene: 52842156

Following gene: 52842153

Centisome position: 63.68

GC content: 35.78

Gene sequence:

>1062_bases
TTGTCAGTGAGGAATTTTATGGCATATCATCAACTCAGCTATACTTTTTTGAACCACCAAAAATTACCTTTAATTATTCA
GCCTCAAGCTAAAGCGGAAGGTAATATTGATGTTTTAAAACAATTCCTTAAAGAAGAAAATACCTTGTTTAAGGAGCAGC
TTCTCAATTATGGCGCCATTATATTACGTGGGTTTCATGTTAATACCGCTGAACAATTTTTAGAAGTGATCCGGTCAAGC
GATTTGGGGCCAAATTATTCTTATGATTTTTGCCCGATTCCGCGAACACAAATCAGAGAAAATATTTATACTTCGATAAA
TATCCATCCGAGTTTTAATCTTGCTTTACATAATGAAAAATCATATGACCAGGATTTTCCCAGTCACATTTTTTTCAATT
GCATTCATGCCCCGCAAACCGGCGGAGATACTGCATTGGCTGATGGAAACAAGATATGGTTTTCTTTACCAAAGTTATTA
CAAAAAAAATTGCAATCTAAAGGAATATTATATCGAAGGCATTATTATGGTTCTGGAATACAGTACAAAATAATTCGATC
AATAGGCAAAAACTCTGGGTGCATGACCTGGATGGAGCGATTCCAAACGGATGACCAAAATAAAGTGGAAGTGATGCTTC
AGCAAATGGGAGTGCAATTTCGATGGATTCAAGGCAATGGGCTAATCATAGAACAATTGCTTCCTGCCTGCCGGAATCAT
CCGATCAGCGGAAAACTAGTCTGGTTTAATCAAAGTAACCATGCTAATCATTATTATAATGGAACCAGTGATTACATCAA
AAGCAAGATTAATAACACTTTTTCTCGTTTTATCTTGTTACATAAATATTTTCATCCTTATATTGCTTTTTATGGCGACG
GTGAACCTTTATCGAAGCAAGAAGCAGATTGCATTAACTCTGCAATACAAAAAAATACGGTATCCACAGCCTGGCAACCA
GGGGATGTTATGATAGTTGATAATTTTTCCTGCTTACATGGAAAAACACCCCATACAGGAAATCGATTAATCCTGGTTGG
ATTGACAAAATATTTTGATTAA

Upstream 100 bases:

>100_bases
AGATGATGCGGTAATTTTTGTAATATAGGTGAAAAAGAGGGAGCCACTTATAGAATCAGGAAGGACCTACACTCTGAAAG
TCTGATAGTAAACCTCCGGA

Downstream 100 bases:

>100_bases
AGGGACCCATATCAATGCCTGATGATATTTCACGAAAACAATTTAGTATTGGAGATTTGTATTGTACTAATGAATTGGAA
GTCAGTGGTTTAATTTATGA

Product: pyoverdine biosynthesis regulatory gene SyrP-like

Products: NA

Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein B; Regulatory Protein; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Pyoverdine Biosynthesis Regulatory Gene; Amino Acid Adenylation Domain-Containing Protein; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Syrp Like Protein Albicidin Biosynthesis Regulation; Taurine Catabolism Dioxygenase Taud/Tfda; SyrP-Like Regulatory Protein; Regulatory Protein SyrP-Like; NRPS-Like Protein; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Syringomycin Synthesis Regulator SyrP; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSVRNFMAYHQLSYTFLNHQKLPLIIQPQAKAEGNIDVLKQFLKEENTLFKEQLLNYGAIILRGFHVNTAEQFLEVIRSS
DLGPNYSYDFCPIPRTQIRENIYTSINIHPSFNLALHNEKSYDQDFPSHIFFNCIHAPQTGGDTALADGNKIWFSLPKLL
QKKLQSKGILYRRHYYGSGIQYKIIRSIGKNSGCMTWMERFQTDDQNKVEVMLQQMGVQFRWIQGNGLIIEQLLPACRNH
PISGKLVWFNQSNHANHYYNGTSDYIKSKINNTFSRFILLHKYFHPYIAFYGDGEPLSKQEADCINSAIQKNTVSTAWQP
GDVMIVDNFSCLHGKTPHTGNRLILVGLTKYFD

Sequences:

>Translated_353_residues
MSVRNFMAYHQLSYTFLNHQKLPLIIQPQAKAEGNIDVLKQFLKEENTLFKEQLLNYGAIILRGFHVNTAEQFLEVIRSS
DLGPNYSYDFCPIPRTQIRENIYTSINIHPSFNLALHNEKSYDQDFPSHIFFNCIHAPQTGGDTALADGNKIWFSLPKLL
QKKLQSKGILYRRHYYGSGIQYKIIRSIGKNSGCMTWMERFQTDDQNKVEVMLQQMGVQFRWIQGNGLIIEQLLPACRNH
PISGKLVWFNQSNHANHYYNGTSDYIKSKINNTFSRFILLHKYFHPYIAFYGDGEPLSKQEADCINSAIQKNTVSTAWQP
GDVMIVDNFSCLHGKTPHTGNRLILVGLTKYFD
>Mature_352_residues
SVRNFMAYHQLSYTFLNHQKLPLIIQPQAKAEGNIDVLKQFLKEENTLFKEQLLNYGAIILRGFHVNTAEQFLEVIRSSD
LGPNYSYDFCPIPRTQIRENIYTSINIHPSFNLALHNEKSYDQDFPSHIFFNCIHAPQTGGDTALADGNKIWFSLPKLLQ
KKLQSKGILYRRHYYGSGIQYKIIRSIGKNSGCMTWMERFQTDDQNKVEVMLQQMGVQFRWIQGNGLIIEQLLPACRNHP
ISGKLVWFNQSNHANHYYNGTSDYIKSKINNTFSRFILLHKYFHPYIAFYGDGEPLSKQEADCINSAIQKNTVSTAWQPG
DVMIVDNFSCLHGKTPHTGNRLILVGLTKYFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40757; Mature: 40626

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRNFMAYHQLSYTFLNHQKLPLIIQPQAKAEGNIDVLKQFLKEENTLFKEQLLNYGAI
CCHHHHHHHHHHHHHEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
ILRGFHVNTAEQFLEVIRSSDLGPNYSYDFCPIPRTQIRENIYTSINIHPSFNLALHNEK
EEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCEEEEECCCC
SYDQDFPSHIFFNCIHAPQTGGDTALADGNKIWFSLPKLLQKKLQSKGILYRRHYYGSGI
CCCCCCCHHHHHEEECCCCCCCCCEEECCCEEEEHHHHHHHHHHHHCCEEEEEEECCCCC
QYKIIRSIGKNSGCMTWMERFQTDDQNKVEVMLQQMGVQFRWIQGNGLIIEQLLPACRNH
HHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCEEHHHHHHHHHCC
PISGKLVWFNQSNHANHYYNGTSDYIKSKINNTFSRFILLHKYFHPYIAFYGDGEPLSKQ
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
EADCINSAIQKNTVSTAWQPGDVMIVDNFSCLHGKTPHTGNRLILVGLTKYFD
HHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHCCCCCCCCCEEEEEEEHHHCC
>Mature Secondary Structure 
SVRNFMAYHQLSYTFLNHQKLPLIIQPQAKAEGNIDVLKQFLKEENTLFKEQLLNYGAI
CHHHHHHHHHHHHHEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
ILRGFHVNTAEQFLEVIRSSDLGPNYSYDFCPIPRTQIRENIYTSINIHPSFNLALHNEK
EEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCEEEEECCCC
SYDQDFPSHIFFNCIHAPQTGGDTALADGNKIWFSLPKLLQKKLQSKGILYRRHYYGSGI
CCCCCCCHHHHHEEECCCCCCCCCEEECCCEEEEHHHHHHHHHHHHCCEEEEEEECCCCC
QYKIIRSIGKNSGCMTWMERFQTDDQNKVEVMLQQMGVQFRWIQGNGLIIEQLLPACRNH
HHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCEEHHHHHHHHHCC
PISGKLVWFNQSNHANHYYNGTSDYIKSKINNTFSRFILLHKYFHPYIAFYGDGEPLSKQ
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
EADCINSAIQKNTVSTAWQPGDVMIVDNFSCLHGKTPHTGNRLILVGLTKYFD
HHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHCCCCCCCCCEEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA