Click here to switch to the map view.

The map label for this gene is 52842099

Identifier: 52842099

GI number: 52842099

Start: 2099864

End: 2100958

Strand: Reverse

Name: 52842099

Synonym: lpg1881

Alternate gene names: NA

Gene position: 2100958-2099864 (Counterclockwise)

Preceding gene: 52842100

Following gene: 52842097

Centisome position: 61.83

GC content: 37.35

Gene sequence:

>1095_bases
TTGGGCCAAATGGCAATGTTGAATCAATCGATGCAAATTTTAAAATCACTATCAGAAGGTATGGGAACAGCAGGGGGGGT
GGCATGGACTACCTTTGGACTGCTATTTGGTTCTTTTGGACTAACTGTTGGCAATTCGGCACTGACTATTTCATTGGGCG
CCATTTCTGCCAGTTTATTCCTATTAGTCGCAATACCTGTTACTTATTGGTCTTATTGTAATTCGCATAAAGAAAATGAT
GAATTACGACATGCTATTGAAGAACAGGAAAATCAAATCGTTCATTATTTGACGGAATATTTATTGGCAACCAGGCAAGA
ATGTTTACTTAAAAATCCTCAAAAATATCGTAATCATTATGATAAGTCTGTGCTGGCCGAAGATCTTAAAAATCGATTAT
TAAAAACCAGGTTAAAACGGCCTGTTTCGTTTACGACAGCACAATTTCTTGACTGTCTATTAGATGATAATCATAAAAAC
TCTATTTTGGGTATGTTAATAGATGCTTGCACGATGGATAAGTTGGTATTGAAAAAGAAACTATTAACTATTTATCGTGG
TAGTGTTTTTCTTCAATTTGAAGAACTTTCCTTATTTGCCAAGTTAAAAACGGGATTTATTGCGTTTTGTGCTGGATTTG
GGTCGCTGGCTGGTTGTTCCAGTGGTTCATTGGGTTTGTTTGCAGCCCTGGGTATTTTCCCCGGTTTTGCTGCAGTTCCT
TTGGTTGGGTTGGCAATTATGGGTATCGCTTGTATTTTTGGTTTGTTGTTGTCTGGAATGAGTATTGATACCGCAATCCA
AAGGAGTAAAGAAAAACAGTTATTTCTCCAAAGCAAAGCAATCCATCATGATTTAAAAAATTTGGCCACGTTGAAAACTG
CATCTGTTAAGGCCGAGTTAAAAGCACAAACCAAATATCAAATTGGAGCTAAAGAGGGATTAACAGAGAAATTAGCAAGG
CCTAAGCTACTGAAGCGATCTTCTTCATTTGATAGTTATTTTTATAGAAACCATCCCTTATGGAACATTTCACACAACCT
TCCAGAAGCTTCGAAATGCGGCTTTGAAAACCTTGGTTCTCCTTTTTCACGTTGA

Upstream 100 bases:

>100_bases
GAACCTTGGTTATCTGCACCCAATATTGGACATTGGTAACCTGACAATTGCATTCTGGTAGTGAATAGTGGAAATAATTT
AATCATACTAAAATAGTATT

Downstream 100 bases:

>100_bases
ATAACCTGTCCTTTTATTATATTGCTGCGTTGCAAACTTTTTCTGGTACTCAGCCTTAAAACAAAAAACCAGGTTATGTA
AAGATCTATTACAACCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MGQMAMLNQSMQILKSLSEGMGTAGGVAWTTFGLLFGSFGLTVGNSALTISLGAISASLFLLVAIPVTYWSYCNSHKEND
ELRHAIEEQENQIVHYLTEYLLATRQECLLKNPQKYRNHYDKSVLAEDLKNRLLKTRLKRPVSFTTAQFLDCLLDDNHKN
SILGMLIDACTMDKLVLKKKLLTIYRGSVFLQFEELSLFAKLKTGFIAFCAGFGSLAGCSSGSLGLFAALGIFPGFAAVP
LVGLAIMGIACIFGLLLSGMSIDTAIQRSKEKQLFLQSKAIHHDLKNLATLKTASVKAELKAQTKYQIGAKEGLTEKLAR
PKLLKRSSSFDSYFYRNHPLWNISHNLPEASKCGFENLGSPFSR

Sequences:

>Translated_364_residues
MGQMAMLNQSMQILKSLSEGMGTAGGVAWTTFGLLFGSFGLTVGNSALTISLGAISASLFLLVAIPVTYWSYCNSHKEND
ELRHAIEEQENQIVHYLTEYLLATRQECLLKNPQKYRNHYDKSVLAEDLKNRLLKTRLKRPVSFTTAQFLDCLLDDNHKN
SILGMLIDACTMDKLVLKKKLLTIYRGSVFLQFEELSLFAKLKTGFIAFCAGFGSLAGCSSGSLGLFAALGIFPGFAAVP
LVGLAIMGIACIFGLLLSGMSIDTAIQRSKEKQLFLQSKAIHHDLKNLATLKTASVKAELKAQTKYQIGAKEGLTEKLAR
PKLLKRSSSFDSYFYRNHPLWNISHNLPEASKCGFENLGSPFSR
>Mature_363_residues
GQMAMLNQSMQILKSLSEGMGTAGGVAWTTFGLLFGSFGLTVGNSALTISLGAISASLFLLVAIPVTYWSYCNSHKENDE
LRHAIEEQENQIVHYLTEYLLATRQECLLKNPQKYRNHYDKSVLAEDLKNRLLKTRLKRPVSFTTAQFLDCLLDDNHKNS
ILGMLIDACTMDKLVLKKKLLTIYRGSVFLQFEELSLFAKLKTGFIAFCAGFGSLAGCSSGSLGLFAALGIFPGFAAVPL
VGLAIMGIACIFGLLLSGMSIDTAIQRSKEKQLFLQSKAIHHDLKNLATLKTASVKAELKAQTKYQIGAKEGLTEKLARP
KLLKRSSSFDSYFYRNHPLWNISHNLPEASKCGFENLGSPFSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40141; Mature: 40010

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQMAMLNQSMQILKSLSEGMGTAGGVAWTTFGLLFGSFGLTVGNSALTISLGAISASLF
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHH
LLVAIPVTYWSYCNSHKENDELRHAIEEQENQIVHYLTEYLLATRQECLLKNPQKYRNHY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
DKSVLAEDLKNRLLKTRLKRPVSFTTAQFLDCLLDDNHKNSILGMLIDACTMDKLVLKKK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LLTIYRGSVFLQFEELSLFAKLKTGFIAFCAGFGSLAGCSSGSLGLFAALGIFPGFAAVP
HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHH
LVGLAIMGIACIFGLLLSGMSIDTAIQRSKEKQLFLQSKAIHHDLKNLATLKTASVKAEL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAQTKYQIGAKEGLTEKLARPKLLKRSSSFDSYFYRNHPLWNISHNLPEASKCGFENLGS
HHHHHHHCCHHCCHHHHHHCHHHHHHCCCCHHHHHCCCCCEECCCCCCCHHHCCHHHCCC
PFSR
CCCC
>Mature Secondary Structure 
GQMAMLNQSMQILKSLSEGMGTAGGVAWTTFGLLFGSFGLTVGNSALTISLGAISASLF
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHH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CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA