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The map label for this gene is 52842097

Identifier: 52842097

GI number: 52842097

Start: 2097042

End: 2097575

Strand: Reverse

Name: 52842097

Synonym: lpg1876

Alternate gene names: NA

Gene position: 2097575-2097042 (Counterclockwise)

Preceding gene: 52842099

Following gene: 52842093

Centisome position: 61.73

GC content: 36.89

Gene sequence:

>534_bases
ATGATGGGTATTAGCATCAGGTACATCATTCTAGGTATCGGCGTAATGAATATTTCTTCTTGTATGGTTTATGAGGATAC
ATATACTACCCGCTATCAAATTTATACCTATGATTATGGTCAGCTGTATCCTCAAACAGATTATCGTGCTCGTGATTACA
ATTATGGCAATCAATCTGGTCAAAGTGTTGTGGTTCCTGATTCATATCATGTTGGTGAGTATCATTCTCCTGTATCCTTT
AAGGACAGAGATAGAAATTGGGTAAACAGCCAAAATCCTCAAGGTTATACGATTCAGATTGCCGATGACGAAAAGGCTGC
TTATGTGGCCCAAAAACTCTATAAAGCACCTAAAAATGATAGAATGGCTCAAGTGAAGTATTATCAAAATGGCAAAACCC
ATTATAAGGGTTTATATGGTACTTATGATAGTCAAGAAGCAGCTCAAAAAGCATTGGAATCATTACCTCCTGAAATTAAA
CAGGGTGCTGGAATTAAAGATTGGGGGAGTGTTCAAGGAAATTTGAATGAATAG

Upstream 100 bases:

>100_bases
AATTCTGAATCAATTCATAAAACATTTTCCTAAAGTTTTCCTTGTATTTGTAGATAACAACAAATAAGAGTAAAAGTAAA
AGTTAAAATCAGGGGGTGTT

Downstream 100 bases:

>100_bases
GTTATCTTGAGAAACTATATGTATTTAAAAAAAATACTTTGATATTCCGTATTTTATTATTCTAAGGTCAGGCTTATAGT
CTTGACTAATACATAATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MMGISIRYIILGIGVMNISSCMVYEDTYTTRYQIYTYDYGQLYPQTDYRARDYNYGNQSGQSVVVPDSYHVGEYHSPVSF
KDRDRNWVNSQNPQGYTIQIADDEKAAYVAQKLYKAPKNDRMAQVKYYQNGKTHYKGLYGTYDSQEAAQKALESLPPEIK
QGAGIKDWGSVQGNLNE

Sequences:

>Translated_177_residues
MMGISIRYIILGIGVMNISSCMVYEDTYTTRYQIYTYDYGQLYPQTDYRARDYNYGNQSGQSVVVPDSYHVGEYHSPVSF
KDRDRNWVNSQNPQGYTIQIADDEKAAYVAQKLYKAPKNDRMAQVKYYQNGKTHYKGLYGTYDSQEAAQKALESLPPEIK
QGAGIKDWGSVQGNLNE
>Mature_177_residues
MMGISIRYIILGIGVMNISSCMVYEDTYTTRYQIYTYDYGQLYPQTDYRARDYNYGNQSGQSVVVPDSYHVGEYHSPVSF
KDRDRNWVNSQNPQGYTIQIADDEKAAYVAQKLYKAPKNDRMAQVKYYQNGKTHYKGLYGTYDSQEAAQKALESLPPEIK
QGAGIKDWGSVQGNLNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20285; Mature: 20285

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGISIRYIILGIGVMNISSCMVYEDTYTTRYQIYTYDYGQLYPQTDYRARDYNYGNQSG
CCCCEEEEEEEEHHHHHHCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
QSVVVPDSYHVGEYHSPVSFKDRDRNWVNSQNPQGYTIQIADDEKAAYVAQKLYKAPKND
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
RMAQVKYYQNGKTHYKGLYGTYDSQEAAQKALESLPPEIKQGAGIKDWGSVQGNLNE
CEEEEEEEECCCCEECEEECCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMGISIRYIILGIGVMNISSCMVYEDTYTTRYQIYTYDYGQLYPQTDYRARDYNYGNQSG
CCCCEEEEEEEEHHHHHHCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
QSVVVPDSYHVGEYHSPVSFKDRDRNWVNSQNPQGYTIQIADDEKAAYVAQKLYKAPKND
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
RMAQVKYYQNGKTHYKGLYGTYDSQEAAQKALESLPPEIKQGAGIKDWGSVQGNLNE
CEEEEEEEECCCCEECEEECCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA