Click here to switch to the map view.

The map label for this gene is 52842003

Identifier: 52842003

GI number: 52842003

Start: 1984497

End: 1984982

Strand: Direct

Name: 52842003

Synonym: lpg1776

Alternate gene names: NA

Gene position: 1984497-1984982 (Clockwise)

Preceding gene: 52842002

Following gene: 52842021

Centisome position: 58.41

GC content: 44.24

Gene sequence:

>486_bases
ATGCAGTCTAAAATACACAAAAAAGAAGACAATACAAATTACAGCTTTCTATTAAAATGTATGGCTGCTGCTACAGCGGC
ACTTGCTACAGCAGCAATAGTAACCGCTGTGGTAATCAAAGCCACTGCGACAGCGGCAGTAGGTTTTGGTGTTGCAACAA
CAGGAGCCGCTCTATCGCCATTATTATTTGTAGGAGGAGCATTACTGGCCGCTGTGGGTATCTGCTGCCTTCCATTATTG
CTCTGCTGTGGCAGCAGCCGTAGTGTATATACCGTGTCAAACTCACCAGCCTACAGGCCTTGGAGCAGTGCATGGTATAC
AGGAGGCTATAATCCAACTTTTCATTCACATCCTGTTTATAACAATGGCGGTACTTACCACACTCATCACTCAGGAACCG
TACATACCCACTCTAATCCAGTACATACACATGGTAATAATGTTCACGTCCATACTACTCCAAGTAATGTTCATGGACAT
AGATAA

Upstream 100 bases:

>100_bases
AAATAATGCTATGCCAGCAAAATAATAACAACATCGCTAAAAGATATAACACACCCAGAAAAATGCATTCTATTAACTGA
AAATCAAGATGAGGTAAGTT

Downstream 100 bases:

>100_bases
TTTTATCTAAACCAAGTGTATTTTATGTATTGCTTGACATAGCAATGGTTCTAAACAAACCATTGCTATCTAAAAATCGC
TGTACTTTACTGTCTCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQSKIHKKEDNTNYSFLLKCMAAATAALATAAIVTAVVIKATATAAVGFGVATTGAALSPLLFVGGALLAAVGICCLPLL
LCCGSSRSVYTVSNSPAYRPWSSAWYTGGYNPTFHSHPVYNNGGTYHTHHSGTVHTHSNPVHTHGNNVHVHTTPSNVHGH
R

Sequences:

>Translated_161_residues
MQSKIHKKEDNTNYSFLLKCMAAATAALATAAIVTAVVIKATATAAVGFGVATTGAALSPLLFVGGALLAAVGICCLPLL
LCCGSSRSVYTVSNSPAYRPWSSAWYTGGYNPTFHSHPVYNNGGTYHTHHSGTVHTHSNPVHTHGNNVHVHTTPSNVHGH
R
>Mature_161_residues
MQSKIHKKEDNTNYSFLLKCMAAATAALATAAIVTAVVIKATATAAVGFGVATTGAALSPLLFVGGALLAAVGICCLPLL
LCCGSSRSVYTVSNSPAYRPWSSAWYTGGYNPTFHSHPVYNNGGTYHTHHSGTVHTHSNPVHTHGNNVHVHTTPSNVHGH
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16847; Mature: 16847

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKIHKKEDNTNYSFLLKCMAAATAALATAAIVTAVVIKATATAAVGFGVATTGAALSP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHH
LLFVGGALLAAVGICCLPLLLCCGSSRSVYTVSNSPAYRPWSSAWYTGGYNPTFHSHPVY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCC
NNGGTYHTHHSGTVHTHSNPVHTHGNNVHVHTTPSNVHGHR
CCCCEEEECCCCEEEECCCCCEECCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MQSKIHKKEDNTNYSFLLKCMAAATAALATAAIVTAVVIKATATAAVGFGVATTGAALSP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHH
LLFVGGALLAAVGICCLPLLLCCGSSRSVYTVSNSPAYRPWSSAWYTGGYNPTFHSHPVY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCC
NNGGTYHTHHSGTVHTHSNPVHTHGNNVHVHTTPSNVHGHR
CCCCEEEECCCCEEEECCCCCEECCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA