| Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
|---|---|
| Accession | NC_002942 |
| Length | 3,397,754 |
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The map label for this gene is glnD
Identifier: 52841948
GI number: 52841948
Start: 1916623
End: 1919208
Strand: Direct
Name: glnD
Synonym: lpg1720
Alternate gene names: 52841948
Gene position: 1916623-1919208 (Clockwise)
Preceding gene: 52841947
Following gene: 52841952
Centisome position: 56.41
GC content: 36.19
Gene sequence:
>2586_bases ATGAAGAACGATAATCGCATCATAAAAAATACGATTAAACAGTTCAAGGAGAAGCTGTGCAAGGACTTTAGCCAAAAAAC TAATATTACCTCCATCACACGCAAGCTTGCTGTATTTATTGATACTATTTTAATTCAATTATTTATTAAAAATAAGCTAC ACTTTGGAGATAATTTTTGTCTCCTGGCTCTTGGAAGCTACGGGCGTAGAGAGCTTCAACTCCATTCAGATATTGACTTG TTAATATTGCACACTGAAAAAGTAAGCAATATCCAATTACAACGCGCACAAAAATTTATCCAGGATTGTTGGGATGTGGG GCTGGAGGTAAGCCATCAAATTACCACTGTTTCTTCATGTGCCAATTTGGCCAGTCAGGATTTGAGCGTAATTTCTACCA TTATGGATATGTTCTTACTGTGTGGGCATGGTGCCTTAATGGAGGAATTAATATACCAAACACATACCTTGCACATGTGG CCTAGCCATCAATACTTCTTTGCCAAACTTCAGGAACAGCAAAATCGTTATGCAAAGTATGGAGAAACCGCCTACAACCT TGAACCTAATATTAAAAATGGTCCAGGTGGATTAAGAGACCTGCAAATTTTGCTAAGCATCAGCAAACGCCATTTTAAAA TTAAAAAATTAGCCGAGGGAATCGGTTACGGCTTTATTACTGATAAAGAGTATGAAGAATTAAAATACTGCCAGAACTTT CTTTGGCGCGTTCGATTTGCTTTGCATATGTTAGCAGGAAAGCCTGAGGAGCGCTTGTCATTTGATTATCAGGTTAAATT AGCTCAATTTTTTGGATATCAAGATCAGTCTCATATCTTGGCCATAGAGCAATTTATGAAAGACTACTTTAAAGTCATCA AACGCAATAGAGAGCTGAATGAAATGCTCTTGCAATGGTTCAATGAAACCATAGTCTATCATCAAAAGCAAAAAATTATT CGTCTGGATGATGAATTTCAACTGTCAAACCGATTCATTGAAGTACGCAATAACCGTGTATTTAAACAAAATCCGCAATC TATATTAAAACTATTCTATTGGCTTGTTAAACGCCCTGACATAGAAGGAGTAAGGGCAAGCACAATCAGACTAATAAGAG AATCATTATTTTTAATGGGCAAACGCTTTAGACAATCAAAAGAAACCGCTAATATATTTATCAACATATTCAGAACTGGT AATGATCCATACGATGCATTACAAAGAATGAATAGATATGGTGTTCTAGCGCACTATCTTGATTGTTTTGCTACAGTCAC TGGACAAATGCAGTATGATTTATTCCATGCCTATACTGTTGATCAGCATACACTGTTTGTGATCCGTAATATATCTCGCT TTAAAAAGAACGAATATGCTAAACAATTTCCTTTATGCGCCAAAATCATTACTGCTTTAGAGAAACCTGAAATTTTGTAT CTCGGCGCTTTATTCCATGACATTGCCAAAGGTCGGGGAGGAGATCATTCTGAATTAGGAGCAATTGAGGCACAACAATT TACACAACGCCACTATATGGAGGCAGAAGATAGCAAATTGATTGTTTGGCTTGTTCGCTACCATTTACTCATGTCACAAA CTGCTCAGCGTAAAGATATTTATGATCCTAAAACAATTGAGCAATTCTGCCAACTTCTGCCTCATGCAAGGTATTTGGAT TATCTTTATTTACTCACAGTAGCAGATATTTGCGGTACAAATCCTACTCTTTGGAATGCCTGGAAAGATTCATTACTTAA AGAATTATATCATGCAGCAAAAACAAGACTTCATAAACAACAAGAGTTGCTTGATGAAGCAGCTCTGATATCCATTCGTA AACAATACGCTATGGATATATTAATTTCAGATGGGATATCCTTCAGAGTCATACAGGATTTATGGGGTCAATTTAAGGGA AAATATTTTCTTCATGAATCTCCTGAGGTAATAGCCAGACACACCAAGGCCATACTGAACAGCAAACAATTTCCAGTGGT AATAATTATGCCGCATCACAGTCAGGGTGGAACTGAAGTATTTATCTACATGCCACATAAAGATGAGAGATTTACTATCA CCACTTCAGTATTGAGCAATCATCACGTTACTATACAGGAAGCAGCAATTATTACTTGTGATAATCAATTTGATCTGGAT ACTTATATTATTTTAGATGAAAACAATCAGGCTTTTTTGAATGAACAACGTGCCAGAGACATCCAAAAAAGTCTATGTGA TCATCTGGCCAATACAGGACGCCTCCCAGCTGTTTCTCGCAGAAGATTATCCAGAGCATTGACTCATTTTAATGTCAAAA CACAAATTAACTTTATTGATGACAATACGAATCATCAAACCCAACTATTTCTCGTTACCAATGACAGACCTGGACTTTTG GCGACTATAAGTCGCGTGTTTCTTACACTAAACATTCATTTACATAATGCAAAAATTGCTACAGCTGGTGAGCGGGTAGA AGATATGTTTTATATCTCCAACCAGACAGGTTATTCCCTGAATCATGAGGAAAAAACAATTTTAAAAGAAAAATTAATTT TGGAAATTTCTAAAAGCAAGTATTAA
Upstream 100 bases:
>100_bases GATCATTGGACTGTCGTTACCAAAGATCATAGTCTTTCAGCTCAATGGGAGCACACACTTTTGGTAACTGATACAGGTGT TGAAATTCTGACTTTACGTA
Downstream 100 bases:
>100_bases GAAATATGCCAAGATAAATTACTAGCGAAGGTTTCTGAAAAAATCTGACAGCAATTGAGAACACTCAGCCTGCATAATGC CTTCGTCTATTAATACCGAA
Product: protein-PII uridylyltransferase
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 861; Mature: 861
Protein sequence:
>861_residues MKNDNRIIKNTIKQFKEKLCKDFSQKTNITSITRKLAVFIDTILIQLFIKNKLHFGDNFCLLALGSYGRRELQLHSDIDL LILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMW PSHQYFFAKLQEQQNRYAKYGETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELNEMLLQWFNETIVYHQKQKII RLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPDIEGVRASTIRLIRESLFLMGKRFRQSKETANIFINIFRTG NDPYDALQRMNRYGVLAHYLDCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDIYDPKTIEQFCQLLPHARYLD YLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQQELLDEAALISIRKQYAMDILISDGISFRVIQDLWGQFKG KYFLHESPEVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFIDDNTNHQTQLFLVTNDRPGLL ATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLNHEEKTILKEKLILEISKSKY
Sequences:
>Translated_861_residues MKNDNRIIKNTIKQFKEKLCKDFSQKTNITSITRKLAVFIDTILIQLFIKNKLHFGDNFCLLALGSYGRRELQLHSDIDL LILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMW PSHQYFFAKLQEQQNRYAKYGETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELNEMLLQWFNETIVYHQKQKII RLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPDIEGVRASTIRLIRESLFLMGKRFRQSKETANIFINIFRTG NDPYDALQRMNRYGVLAHYLDCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDIYDPKTIEQFCQLLPHARYLD YLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQQELLDEAALISIRKQYAMDILISDGISFRVIQDLWGQFKG KYFLHESPEVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFIDDNTNHQTQLFLVTNDRPGLL ATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLNHEEKTILKEKLILEISKSKY >Mature_861_residues MKNDNRIIKNTIKQFKEKLCKDFSQKTNITSITRKLAVFIDTILIQLFIKNKLHFGDNFCLLALGSYGRRELQLHSDIDL LILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMW PSHQYFFAKLQEQQNRYAKYGETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELNEMLLQWFNETIVYHQKQKII RLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPDIEGVRASTIRLIRESLFLMGKRFRQSKETANIFINIFRTG NDPYDALQRMNRYGVLAHYLDCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDIYDPKTIEQFCQLLPHARYLD YLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQQELLDEAALISIRKQYAMDILISDGISFRVIQDLWGQFKG KYFLHESPEVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFIDDNTNHQTQLFLVTNDRPGLL ATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLNHEEKTILKEKLILEISKSKY
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=848, Percent_Identity=37.3820754716981, Blast_Score=593, Evalue=1e-170,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005105 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR013546 [H]
Pfam domain/function: PF03445 DUF294; PF08335 GlnD_UR_UTase [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 100773; Mature: 100773
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDNRIIKNTIKQFKEKLCKDFSQKTNITSITRKLAVFIDTILIQLFIKNKLHFGDNFC CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LLALGSYGRRELQLHSDIDLLILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSC EEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMWPSHQYFFAKLQEQQNRYAKY HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHC GETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELN HHHHHHHHHHHCCCCHHHCCCHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH EMLLQWFNETIVYHQKQKIIRLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPD HHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCC IEGVRASTIRLIRESLFLMGKRFRQSKETANIFINIFRTGNDPYDALQRMNRYGVLAHYL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH DCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY HHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEE LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDI HHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC YDPKTIEQFCQLLPHARYLDYLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQ CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QELLDEAALISIRKQYAMDILISDGISFRVIQDLWGQFKGKYFLHESPEVIARHTKAILN HHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHC SKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD CCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEHHHCCCCEEEEEEEEEEECCCCCCE TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFID EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEEEEEE DNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSL CCCCCEEEEEEEECCCCCHHHHHHHHHEEEEEEEECCEEECCHHHHHHEEEEECCCCCCC NHEEKTILKEKLILEISKSKY CCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNDNRIIKNTIKQFKEKLCKDFSQKTNITSITRKLAVFIDTILIQLFIKNKLHFGDNFC CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LLALGSYGRRELQLHSDIDLLILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSC EEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMWPSHQYFFAKLQEQQNRYAKY HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHC GETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELN HHHHHHHHHHHCCCCHHHCCCHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH EMLLQWFNETIVYHQKQKIIRLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPD HHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCC IEGVRASTIRLIRESLFLMGKRFRQSKETANIFINIFRTGNDPYDALQRMNRYGVLAHYL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH DCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY HHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEE LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDI HHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC YDPKTIEQFCQLLPHARYLDYLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQ CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QELLDEAALISIRKQYAMDILISDGISFRVIQDLWGQFKGKYFLHESPEVIARHTKAILN HHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHC SKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD CCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEHHHCCCCEEEEEEEEEEECCCCCCE TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFID EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEEEEEE DNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSL CCCCCEEEEEEEECCCCCHHHHHHHHHEEEEEEEECCEEECCHHHHHHEEEEECCCCCCC NHEEKTILKEKLILEISKSKY CCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA