| Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
|---|---|
| Accession | NC_002942 |
| Length | 3,397,754 |
Click here to switch to the map view.
The map label for this gene is 52841887
Identifier: 52841887
GI number: 52841887
Start: 1835379
End: 1836422
Strand: Direct
Name: 52841887
Synonym: lpg1659
Alternate gene names: NA
Gene position: 1835379-1836422 (Clockwise)
Preceding gene: 52841886
Following gene: 52841888
Centisome position: 54.02
GC content: 38.79
Gene sequence:
>1044_bases ATGATGATGAAATTGACACGGAATATGATTGCTCAGGCTGTCCAGGCTAAAATAATTACAGAGGAACAGGCCAAGAACCT CATTGAATTCATAAAAAATCTTCCCGAACAAACTCCAGGATTTAACTTAACCAATGTCCTTTATTATTTTGGAGGACTTA TAGCTATTGGTGCAATGACTTTGTTTATGAATCTTGGATGGGAACTGTTTGGAGGCTGGGGTATTTTCTATTTGTCAATT TGTTATGCCCTACTCGGCCTAGGCCTTTGCAGTCAATTCAATGGGAAAGGATATGTCATTCCTGCTGGCATTTGCGCTAC TTTTGTCATTTGCCTTACTCCTTTGGCAATCTATGGCTTACAAAAAGGAATGGGCTGGTGGCCAGATGACAGCGTTTATC ATGACTATCATGTTTATATCAAATGGCATTGGATCTTCATGGAGTTGGGTACGCTAATGGTAGGTACTATCCTGGCCTGG ATATATCGGTATCCTTTTATGATTATGCCAATTGCGGTCACTCTTTGGTATATGTCCATGGATATAGCAGCCATGTTGGG TGACGGTCAATTTGATTTTGAGCTAAGGGCAATGGTTTCAATGTACTTTGGCTTAATTACTATATTGATTGCCTTTTGGG TTGATGTTCGATCCAGTCAATCAGCAGATTATGCTTTTTGGCTGTATATATTCGGTGTCATGGCTTTTTGGTTCGGTTTA AGCTGCCAATCCTCCGACAGTGAAATATCCAAATTTATCTATATGTGCATTAACCTCTTCATGATTCTGACTGGAGTCAT TTTAAACAGAAAAGTATTCGTTATTTTTGGTGCGTTAGGATGTTCTTATTATCTGGGTCATCTGGCATTTCAGGTGTTTA AATTCAGTATGCTTTTCCCTGTTGCTTTGACTGCCATAGGTTTTGGTATCATTTATTTAGGAATAATCTGGCAAAAAAAT GAAGCGAAACTTACTAAAGAGCTTCGATCCATACTTCCCAAACCATTAAGAGACTTATTGGAAGCAAGGGACAGTATGGA TTAA
Upstream 100 bases:
>100_bases TCAGACGCAAGTTTCATACTCTCAGCTATAATTGAGATATTAATCATTAGTTATTGTAAAATCAGGTTAAATTTTAGCAG GAATTCAGTACTCATCGGAG
Downstream 100 bases:
>100_bases TGAAATATTTTCTCACGTCCTATCACATTCTATTACTCTTTAGATAAATTGTAGGTAACTCTTTACTTTCAACTACCTGA AGTAGAAGATAGATGAGTTC
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MMMKLTRNMIAQAVQAKIITEEQAKNLIEFIKNLPEQTPGFNLTNVLYYFGGLIAIGAMTLFMNLGWELFGGWGIFYLSI CYALLGLGLCSQFNGKGYVIPAGICATFVICLTPLAIYGLQKGMGWWPDDSVYHDYHVYIKWHWIFMELGTLMVGTILAW IYRYPFMIMPIAVTLWYMSMDIAAMLGDGQFDFELRAMVSMYFGLITILIAFWVDVRSSQSADYAFWLYIFGVMAFWFGL SCQSSDSEISKFIYMCINLFMILTGVILNRKVFVIFGALGCSYYLGHLAFQVFKFSMLFPVALTAIGFGIIYLGIIWQKN EAKLTKELRSILPKPLRDLLEARDSMD
Sequences:
>Translated_347_residues MMMKLTRNMIAQAVQAKIITEEQAKNLIEFIKNLPEQTPGFNLTNVLYYFGGLIAIGAMTLFMNLGWELFGGWGIFYLSI CYALLGLGLCSQFNGKGYVIPAGICATFVICLTPLAIYGLQKGMGWWPDDSVYHDYHVYIKWHWIFMELGTLMVGTILAW IYRYPFMIMPIAVTLWYMSMDIAAMLGDGQFDFELRAMVSMYFGLITILIAFWVDVRSSQSADYAFWLYIFGVMAFWFGL SCQSSDSEISKFIYMCINLFMILTGVILNRKVFVIFGALGCSYYLGHLAFQVFKFSMLFPVALTAIGFGIIYLGIIWQKN EAKLTKELRSILPKPLRDLLEARDSMD >Mature_347_residues MMMKLTRNMIAQAVQAKIITEEQAKNLIEFIKNLPEQTPGFNLTNVLYYFGGLIAIGAMTLFMNLGWELFGGWGIFYLSI CYALLGLGLCSQFNGKGYVIPAGICATFVICLTPLAIYGLQKGMGWWPDDSVYHDYHVYIKWHWIFMELGTLMVGTILAW IYRYPFMIMPIAVTLWYMSMDIAAMLGDGQFDFELRAMVSMYFGLITILIAFWVDVRSSQSADYAFWLYIFGVMAFWFGL SCQSSDSEISKFIYMCINLFMILTGVILNRKVFVIFGALGCSYYLGHLAFQVFKFSMLFPVALTAIGFGIIYLGIIWQKN EAKLTKELRSILPKPLRDLLEARDSMD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39616; Mature: 39616
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMKLTRNMIAQAVQAKIITEEQAKNLIEFIKNLPEQTPGFNLTNVLYYFGGLIAIGAMT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LFMNLGWELFGGWGIFYLSICYALLGLGLCSQFNGKGYVIPAGICATFVICLTPLAIYGL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH QKGMGWWPDDSVYHDYHVYIKWHWIFMELGTLMVGTILAWIYRYPFMIMPIAVTLWYMSM HHCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIAAMLGDGQFDFELRAMVSMYFGLITILIAFWVDVRSSQSADYAFWLYIFGVMAFWFGL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC SCQSSDSEISKFIYMCINLFMILTGVILNRKVFVIFGALGCSYYLGHLAFQVFKFSMLFP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALTAIGFGIIYLGIIWQKNEAKLTKELRSILPKPLRDLLEARDSMD HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MMMKLTRNMIAQAVQAKIITEEQAKNLIEFIKNLPEQTPGFNLTNVLYYFGGLIAIGAMT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LFMNLGWELFGGWGIFYLSICYALLGLGLCSQFNGKGYVIPAGICATFVICLTPLAIYGL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH QKGMGWWPDDSVYHDYHVYIKWHWIFMELGTLMVGTILAWIYRYPFMIMPIAVTLWYMSM HHCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIAAMLGDGQFDFELRAMVSMYFGLITILIAFWVDVRSSQSADYAFWLYIFGVMAFWFGL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC SCQSSDSEISKFIYMCINLFMILTGVILNRKVFVIFGALGCSYYLGHLAFQVFKFSMLFP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALTAIGFGIIYLGIIWQKNEAKLTKELRSILPKPLRDLLEARDSMD HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA