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The map label for this gene is 52841848

Identifier: 52841848

GI number: 52841848

Start: 1788993

End: 1789433

Strand: Reverse

Name: 52841848

Synonym: lpg1620

Alternate gene names: NA

Gene position: 1789433-1788993 (Counterclockwise)

Preceding gene: 52841849

Following gene: 52841847

Centisome position: 52.67

GC content: 37.87

Gene sequence:

>441_bases
ATGTGGTTATTGGAGAGAAACATGTCGGCAAAAAAAAAATCGATAACTCATGATCGACTTCTTACAGAAGTAGAGCTTGA
ATTAATGAATATTATCTGGAGCCTTGATAAGGTAACTATTAAGGAGGTTGTTTCACATCTGCCTAAGGAAAGGCCTTTGG
CTTATACAACCGTGGCAACAGTACTAAAAGTGCTGGAACAAAAGGGATTTCTTGAGTGTCAAAAAAATTCCTATGCTCAT
GTTTTTACACCTATAGTTACAAAGTCAGATTATGAAAGCACTTGTATTGATCATATGGTTGCCAATGTTTTTGATGGGGA
GCCCCGAGCACTTGTCCAAAGACTTTTGTTAGCCAGAAAGTTACAGCATGATGACATTCAAGCCATTGAAGAAGCACTTA
AACAATTAAACGCTGGTGAAAAACAGCCAGAGGTGATGTAA

Upstream 100 bases:

>100_bases
TGAGTAAACTGTTCTCACGTGTAGAGAAGTATTTTCCCCATGACTATTTTAACTCTACTATTTTTATAGTAGGATACTAC
TATAAAAATAGTAGTAGCGT

Downstream 100 bases:

>100_bases
TGTTATTAATAGAAATCGTATTGACTATTCATTGCCTGCTTCTTCTCAGTTCACTATTTATAGGGCGTGCCTGGCTAGCA
AATAAACCATCATTTAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; CopY Family Transcriptional Regulator; Penicillinase Repressor; Antibiotic Resistance-Related Regulatory Protein; BlaI-Like Antibiotic Resistance-Related Regulatory Protein; Transcriptional Repressor Copy Family; Transcriptional Regulator BlaI/MecI/CopY Family; MarR Family Transcriptional Regulator; Beta-Lactamase Repressor; BlaI/MecI/CopY Family Transcriptional Regulator; MarR Family Transcriptional Regulatory Protein; Transcriptional Regulators; Transcriptional Regulator TrmB

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MWLLERNMSAKKKSITHDRLLTEVELELMNIIWSLDKVTIKEVVSHLPKERPLAYTTVATVLKVLEQKGFLECQKNSYAH
VFTPIVTKSDYESTCIDHMVANVFDGEPRALVQRLLLARKLQHDDIQAIEEALKQLNAGEKQPEVM

Sequences:

>Translated_146_residues
MWLLERNMSAKKKSITHDRLLTEVELELMNIIWSLDKVTIKEVVSHLPKERPLAYTTVATVLKVLEQKGFLECQKNSYAH
VFTPIVTKSDYESTCIDHMVANVFDGEPRALVQRLLLARKLQHDDIQAIEEALKQLNAGEKQPEVM
>Mature_146_residues
MWLLERNMSAKKKSITHDRLLTEVELELMNIIWSLDKVTIKEVVSHLPKERPLAYTTVATVLKVLEQKGFLECQKNSYAH
VFTPIVTKSDYESTCIDHMVANVFDGEPRALVQRLLLARKLQHDDIQAIEEALKQLNAGEKQPEVM

Specific function: Unknown

COG id: COG3682

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16785; Mature: 16785

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLLERNMSAKKKSITHDRLLTEVELELMNIIWSLDKVTIKEVVSHLPKERPLAYTTVAT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VLKVLEQKGFLECQKNSYAHVFTPIVTKSDYESTCIDHMVANVFDGEPRALVQRLLLARK
HHHHHHHCCCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LQHDDIQAIEEALKQLNAGEKQPEVM
HCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MWLLERNMSAKKKSITHDRLLTEVELELMNIIWSLDKVTIKEVVSHLPKERPLAYTTVAT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VLKVLEQKGFLECQKNSYAHVFTPIVTKSDYESTCIDHMVANVFDGEPRALVQRLLLARK
HHHHHHHCCCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LQHDDIQAIEEALKQLNAGEKQPEVM
HCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA