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The map label for this gene is yoqW [H]

Identifier: 52841462

GI number: 52841462

Start: 1358462

End: 1359130

Strand: Direct

Name: yoqW [H]

Synonym: lpg1230

Alternate gene names: 52841462

Gene position: 1358462-1359130 (Clockwise)

Preceding gene: 52841461

Following gene: 52841463

Centisome position: 39.98

GC content: 39.91

Gene sequence:

>669_bases
ATGTGCGGTCGTTTTGCTTATATTGCTTCTTATGACAAACTGAAATACCAATTTCATCTAGCCAATGCGATTGAAGTTCC
ACCTCGCTTCAATATTTCTCCAGGAGCTGATGTATTATGTCTTGTTGAAACCGATGGTCATAAAATTCAATGCGTATTAT
TGCGTTGGGGATTCATTCCCTCGTGGGCAACGGACAGAAAAAAATTAGGAAATCTCATCAATGCACGAGCCGAAACAGTT
TTTGAAAAACCGACTTTTCGTCAGTCAATAAAATCGAAACGATGTTTAATCCCTATGAGTGGCTTTTATGAATGGCGCCA
AGAGGATGGTGTAAAACAGCCTTATTTTTTTCAAAAAAAGAATCATGATTTGCTGGCTGTTGCTGCTATTCGAGATACCT
GGCAGCAGAGCGATGAGGTGATTCATTCCTGTTGCCTGATTACAACGGATGCTAATGCATTTATGCAACCAGTGCACAAT
CGCATGCCAGTAATTTTAGGTGAAGAGGCTCAAGCTATTTGGCTTAACAACACGCAATATGATAAAGCACAATTAATGGC
GTTAATGAAACCTTATCCTTATGAGGATTTGGAAGGCTATCGAGTGACTACTTTAGTGAACAAAGCCAATTTTGACCATC
CCTTGGCGATGGAGCCATTATCTGAATAA

Upstream 100 bases:

>100_bases
GATCAATTACAAAGTGCAAAGGTTTAAGTAAATTAGGCTATTCTATCGATAGACAATGAAAAGAAAGAGATACTAAACTT
AAAAAACAGCTGAGAATGAT

Downstream 100 bases:

>100_bases
AAAAATTTAAAAATAATTTTCCTAATATTCTCGAAGGCTTAGTGTGGTTTTCATTTCCAGTTGTTCTGAGATGGGATTTA
CAGTTTATTTTTCCTTGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MCGRFAYIASYDKLKYQFHLANAIEVPPRFNISPGADVLCLVETDGHKIQCVLLRWGFIPSWATDRKKLGNLINARAETV
FEKPTFRQSIKSKRCLIPMSGFYEWRQEDGVKQPYFFQKKNHDLLAVAAIRDTWQQSDEVIHSCCLITTDANAFMQPVHN
RMPVILGEEAQAIWLNNTQYDKAQLMALMKPYPYEDLEGYRVTTLVNKANFDHPLAMEPLSE

Sequences:

>Translated_222_residues
MCGRFAYIASYDKLKYQFHLANAIEVPPRFNISPGADVLCLVETDGHKIQCVLLRWGFIPSWATDRKKLGNLINARAETV
FEKPTFRQSIKSKRCLIPMSGFYEWRQEDGVKQPYFFQKKNHDLLAVAAIRDTWQQSDEVIHSCCLITTDANAFMQPVHN
RMPVILGEEAQAIWLNNTQYDKAQLMALMKPYPYEDLEGYRVTTLVNKANFDHPLAMEPLSE
>Mature_222_residues
MCGRFAYIASYDKLKYQFHLANAIEVPPRFNISPGADVLCLVETDGHKIQCVLLRWGFIPSWATDRKKLGNLINARAETV
FEKPTFRQSIKSKRCLIPMSGFYEWRQEDGVKQPYFFQKKNHDLLAVAAIRDTWQQSDEVIHSCCLITTDANAFMQPVHN
RMPVILGEEAQAIWLNNTQYDKAQLMALMKPYPYEDLEGYRVTTLVNKANFDHPLAMEPLSE

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=233, Percent_Identity=30.0429184549356, Blast_Score=98, Evalue=5e-21,
Organism=Homo sapiens, GI54607104, Length=233, Percent_Identity=30.0429184549356, Blast_Score=98, Evalue=5e-21,
Organism=Escherichia coli, GI48994894, Length=185, Percent_Identity=31.3513513513514, Blast_Score=85, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6323761, Length=198, Percent_Identity=30.3030303030303, Blast_Score=89, Evalue=5e-19,
Organism=Drosophila melanogaster, GI21355761, Length=214, Percent_Identity=26.1682242990654, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 25607; Mature: 25607

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFAYIASYDKLKYQFHLANAIEVPPRFNISPGADVLCLVETDGHKIQCVLLRWGFIP
CCCCEEEEECCCCEEEEEEECCEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCC
SWATDRKKLGNLINARAETVFEKPTFRQSIKSKRCLIPMSGFYEWRQEDGVKQPYFFQKK
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEECHHHHHHHHHCCCCCCEEEECC
NHDLLAVAAIRDTWQQSDEVIHSCCLITTDANAFMQPVHNRMPVILGEEAQAIWLNNTQY
CCCEEEEEEHHHHHHHHHHHHHHHEEEEECHHHHHHHHHCCCCEEECCCCCEEEECCCCC
DKAQLMALMKPYPYEDLEGYRVTTLVNKANFDHPLAMEPLSE
HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MCGRFAYIASYDKLKYQFHLANAIEVPPRFNISPGADVLCLVETDGHKIQCVLLRWGFIP
CCCCEEEEECCCCEEEEEEECCEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCC
SWATDRKKLGNLINARAETVFEKPTFRQSIKSKRCLIPMSGFYEWRQEDGVKQPYFFQKK
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEECHHHHHHHHHCCCCCCEEEECC
NHDLLAVAAIRDTWQQSDEVIHSCCLITTDANAFMQPVHNRMPVILGEEAQAIWLNNTQY
CCCEEEEEEHHHHHHHHHHHHHHHEEEEECHHHHHHHHHCCCCEEECCCCCEEEECCCCC
DKAQLMALMKPYPYEDLEGYRVTTLVNKANFDHPLAMEPLSE
HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]