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The map label for this gene is ychK

Identifier: 52841187

GI number: 52841187

Start: 1034157

End: 1035035

Strand: Direct

Name: ychK

Synonym: lpg0952

Alternate gene names: 52841187

Gene position: 1034157-1035035 (Clockwise)

Preceding gene: 52841186

Following gene: 52841188

Centisome position: 30.44

GC content: 40.96

Gene sequence:

>879_bases
TTGACAAATCAATACCCTAAAATTGGTTTGGCTTTAGGTAGCGGATCAGCGCGCGGCTGGGCTCATATCGGGGTAATTCA
ATCAATCAAACGATTGGGTGTAAGGATTGATTGTGTCGCTGGATGTTCCATAGGCGCATTGGTTGGCGCCATTTATGCCT
GTGGCACCCTGGATCTGTTTGAACAATGGGTGTTAAAGCTTAATAAAAGAGAAATGGCTAAACTCATTGATGTGAATTTT
TTAGGTGGCGGGGTTCTCTCTGGTAGTAAATTGATGACCTTTTTCAAGGATTTTGGTCTTGAAAAAAATATTGAAGAGCT
TTCTCTACCTTTTAGTTCAGTTGCTACTGATTTGAGTACTGGACGTGAGATATGGCTAAGTAAAGGGTCTCTTGAGCTTG
CTATTCGCTCATCCATGTCTTTACCAGGGTTATTTACCCCGCAGCGTTATAAGGATTGCTGGTTAGTCGATGGTGGTTTG
GTTAATCCCGTTCCTATTACATTGTGTCGAGCTATGGGAGCAGAGGTTGTAATTGCTGTCAATTTAAATCATGACTTGTT
AAGAGTACCTCCGAGCACGATAGAACACCCGGGGTTTTTTTCAGTTCTCTCAGGCCAATTTGATAAAATGATAAAAAGAA
TAATGGGTATCAGTGATGGACCTGGATATTATGATGTCTTGACCAGAAGCATCAAAATAATGCAGGACCGGATAACCCGG
GCAAGAGCGGCAGGTGATCCTGCTGATTTGACTTTGGTTCCTCAATTAGGAAACATCATGCTTTATGATTTTCATAAAGC
AAAAGAGGCGATTCATGAGGGTGAAAATTGTGTTTTGCGAGAAAAAAATAATATTTTACAACTAGTTGGTCTAGAATAG

Upstream 100 bases:

>100_bases
CGTAGGGCAGCCCACTTTGAAAATTGATGCCTTGACGGTTGGCGGAACCAAGTAAGAAAATGCCAGTCAAGAGTTTACCA
ACTATTTCCAGGAGTTATTC

Downstream 100 bases:

>100_bases
TAATTAAACAAGCTTAAGGAAGAGCTATGCCAAAAGAATCCAATTCCAATTCATTATTTGACTTACTGTTGAAAAATGAA
AAAAATTCGGCAGACCGTGT

Product: phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTNQYPKIGLALGSGSARGWAHIGVIQSIKRLGVRIDCVAGCSIGALVGAIYACGTLDLFEQWVLKLNKREMAKLIDVNF
LGGGVLSGSKLMTFFKDFGLEKNIEELSLPFSSVATDLSTGREIWLSKGSLELAIRSSMSLPGLFTPQRYKDCWLVDGGL
VNPVPITLCRAMGAEVVIAVNLNHDLLRVPPSTIEHPGFFSVLSGQFDKMIKRIMGISDGPGYYDVLTRSIKIMQDRITR
ARAAGDPADLTLVPQLGNIMLYDFHKAKEAIHEGENCVLREKNNILQLVGLE

Sequences:

>Translated_292_residues
MTNQYPKIGLALGSGSARGWAHIGVIQSIKRLGVRIDCVAGCSIGALVGAIYACGTLDLFEQWVLKLNKREMAKLIDVNF
LGGGVLSGSKLMTFFKDFGLEKNIEELSLPFSSVATDLSTGREIWLSKGSLELAIRSSMSLPGLFTPQRYKDCWLVDGGL
VNPVPITLCRAMGAEVVIAVNLNHDLLRVPPSTIEHPGFFSVLSGQFDKMIKRIMGISDGPGYYDVLTRSIKIMQDRITR
ARAAGDPADLTLVPQLGNIMLYDFHKAKEAIHEGENCVLREKNNILQLVGLE
>Mature_291_residues
TNQYPKIGLALGSGSARGWAHIGVIQSIKRLGVRIDCVAGCSIGALVGAIYACGTLDLFEQWVLKLNKREMAKLIDVNFL
GGGVLSGSKLMTFFKDFGLEKNIEELSLPFSSVATDLSTGREIWLSKGSLELAIRSSMSLPGLFTPQRYKDCWLVDGGLV
NPVPITLCRAMGAEVVIAVNLNHDLLRVPPSTIEHPGFFSVLSGQFDKMIKRIMGISDGPGYYDVLTRSIKIMQDRITRA
RAAGDPADLTLVPQLGNIMLYDFHKAKEAIHEGENCVLREKNNILQLVGLE

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=182, Percent_Identity=32.967032967033, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI116256487, Length=182, Percent_Identity=32.967032967033, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI260656039, Length=182, Percent_Identity=32.967032967033, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI260656037, Length=182, Percent_Identity=32.967032967033, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI260656043, Length=182, Percent_Identity=32.967032967033, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI148727335, Length=186, Percent_Identity=33.8709677419355, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI148727290, Length=186, Percent_Identity=33.8709677419355, Blast_Score=95, Evalue=6e-20,
Organism=Escherichia coli, GI226510936, Length=297, Percent_Identity=42.0875420875421, Blast_Score=241, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI71997289, Length=165, Percent_Identity=30.9090909090909, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71997299, Length=165, Percent_Identity=30.9090909090909, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6323581, Length=189, Percent_Identity=33.8624338624339, Blast_Score=88, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28571388, Length=183, Percent_Identity=33.879781420765, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281376913, Length=183, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31908; Mature: 31777

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQYPKIGLALGSGSARGWAHIGVIQSIKRLGVRIDCVAGCSIGALVGAIYACGTLDLF
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCHHHHH
EQWVLKLNKREMAKLIDVNFLGGGVLSGSKLMTFFKDFGLEKNIEELSLPFSSVATDLST
HHHHHHHCHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHC
GREIWLSKGSLELAIRSSMSLPGLFTPQRYKDCWLVDGGLVNPVPITLCRAMGAEVVIAV
CCEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCEEEEEE
NLNHDLLRVPPSTIEHPGFFSVLSGQFDKMIKRIMGISDGPGYYDVLTRSIKIMQDRITR
ECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ARAAGDPADLTLVPQLGNIMLYDFHKAKEAIHEGENCVLREKNNILQLVGLE
HHCCCCCCCEEECCCCCCEEEEEHHHHHHHHHCCCCEEEECCCCEEEEEECC
>Mature Secondary Structure 
TNQYPKIGLALGSGSARGWAHIGVIQSIKRLGVRIDCVAGCSIGALVGAIYACGTLDLF
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCHHHHH
EQWVLKLNKREMAKLIDVNFLGGGVLSGSKLMTFFKDFGLEKNIEELSLPFSSVATDLST
HHHHHHHCHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHC
GREIWLSKGSLELAIRSSMSLPGLFTPQRYKDCWLVDGGLVNPVPITLCRAMGAEVVIAV
CCEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCEEEEEE
NLNHDLLRVPPSTIEHPGFFSVLSGQFDKMIKRIMGISDGPGYYDVLTRSIKIMQDRITR
ECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ARAAGDPADLTLVPQLGNIMLYDFHKAKEAIHEGENCVLREKNNILQLVGLE
HHCCCCCCCEEECCCCCCEEEEEHHHHHHHHHCCCCEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]