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The map label for this gene is 52841107

Identifier: 52841107

GI number: 52841107

Start: 945420

End: 946286

Strand: Reverse

Name: 52841107

Synonym: lpg0871

Alternate gene names: NA

Gene position: 946286-945420 (Counterclockwise)

Preceding gene: 52841109

Following gene: 52841103

Centisome position: 27.85

GC content: 35.52

Gene sequence:

>867_bases
ATGAGATTCAATCATTTTATTGCTCCACTGGTTTTACTCCCTGTTTGTGCATTAAGCCAACCCCAAAATGACAAAGGAGA
TGTCTTTTTATCAAAAATTCCAACCAGTAAAAATGCTTTTGTAAAATCTTATTCCAGTGAATCGACACACTTGAAGTTAC
TTGAGCCTAATGCCAGAAGTATTGACTACCCCACTCAAATTGTTCGTGTCTCTGGTTCTCTCGAATCACAACAGCTGGAC
TGCGATCAAGTACACGAAGAAATTCTTGAAAAAGTGGTGGCTCCTTTTACTCCTGATAAATTCACTTACAATACTTATAT
TAGTTGTAGTTATAATCCGGATACCAATATGGCCACTGGCTTTCTCATCAATAGCTATTTAGATCCACTAACCGATGATG
CAGTGGAATTATTAGAAACTTACCTGGCAAAAAATAATGGATCCAATCTGTTAGGTACACCATTGACATTTGAGCCAGCA
AAAGCTCTTGTTGTTGCTTTAACTATCTCGGCGGGAATGAAAAAAAATCCTAATAAACCACCCTTTGTAGAATATAAGCA
AGACCGCAGCAATTTCTACTTCAAAAGCAATTATGAAATGAGAAATAAATTGTTCACTGATATTTATCAAAATTTCTTTA
CCAATGATCCCAATAAAATTCTACCTTTCCTGGATAAGTGGATTTTCGTTAATGCCTCAAGCGTTTATGAAGCCATTTTA
ATGGACTCCAATTTTGTCGAACTGCAACCTGAACGAATTTTTCTTATGGAAAATGGTGAACAAATATTTGTTTCCAATCT
AAAATATTATTTCACTCATAATTGTAATAGGTACAGTAATCACCGCTGCTTACAACCGCAAGCTTGA

Upstream 100 bases:

>100_bases
TGTTTTCATGCGATCACATGTGATCAAAACCTGATCTAATCTGTTCCCTGCCAAACTGGTTCTTTAAATTAAAGGATTTA
ATTTAAAAAAGGAGTTTGCT

Downstream 100 bases:

>100_bases
AGCTCTTTTGACGAAGGAGACATTTTTGGGATGAGCACATTTTATTAAATTATTACTTTTAGATACTTCCTTATGACAGC
AAGCAGATAATATTTCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRFNHFIAPLVLLPVCALSQPQNDKGDVFLSKIPTSKNAFVKSYSSESTHLKLLEPNARSIDYPTQIVRVSGSLESQQLD
CDQVHEEILEKVVAPFTPDKFTYNTYISCSYNPDTNMATGFLINSYLDPLTDDAVELLETYLAKNNGSNLLGTPLTFEPA
KALVVALTISAGMKKNPNKPPFVEYKQDRSNFYFKSNYEMRNKLFTDIYQNFFTNDPNKILPFLDKWIFVNASSVYEAIL
MDSNFVELQPERIFLMENGEQIFVSNLKYYFTHNCNRYSNHRCLQPQA

Sequences:

>Translated_288_residues
MRFNHFIAPLVLLPVCALSQPQNDKGDVFLSKIPTSKNAFVKSYSSESTHLKLLEPNARSIDYPTQIVRVSGSLESQQLD
CDQVHEEILEKVVAPFTPDKFTYNTYISCSYNPDTNMATGFLINSYLDPLTDDAVELLETYLAKNNGSNLLGTPLTFEPA
KALVVALTISAGMKKNPNKPPFVEYKQDRSNFYFKSNYEMRNKLFTDIYQNFFTNDPNKILPFLDKWIFVNASSVYEAIL
MDSNFVELQPERIFLMENGEQIFVSNLKYYFTHNCNRYSNHRCLQPQA
>Mature_288_residues
MRFNHFIAPLVLLPVCALSQPQNDKGDVFLSKIPTSKNAFVKSYSSESTHLKLLEPNARSIDYPTQIVRVSGSLESQQLD
CDQVHEEILEKVVAPFTPDKFTYNTYISCSYNPDTNMATGFLINSYLDPLTDDAVELLETYLAKNNGSNLLGTPLTFEPA
KALVVALTISAGMKKNPNKPPFVEYKQDRSNFYFKSNYEMRNKLFTDIYQNFFTNDPNKILPFLDKWIFVNASSVYEAIL
MDSNFVELQPERIFLMENGEQIFVSNLKYYFTHNCNRYSNHRCLQPQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33033; Mature: 33033

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFNHFIAPLVLLPVCALSQPQNDKGDVFLSKIPTSKNAFVKSYSSESTHLKLLEPNARS
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHEECCCCCCEEEEECCCCCC
IDYPTQIVRVSGSLESQQLDCDQVHEEILEKVVAPFTPDKFTYNTYISCSYNPDTNMATG
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCHHH
FLINSYLDPLTDDAVELLETYLAKNNGSNLLGTPLTFEPAKALVVALTISAGMKKNPNKP
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHEEEEEEEECCCCCCCCCCC
PFVEYKQDRSNFYFKSNYEMRNKLFTDIYQNFFTNDPNKILPFLDKWIFVNASSVYEAIL
CCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEHHHHHHHHH
MDSNFVELQPERIFLMENGEQIFVSNLKYYFTHNCNRYSNHRCLQPQA
CCCCCEEECCCEEEEEECCCEEEEECEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFNHFIAPLVLLPVCALSQPQNDKGDVFLSKIPTSKNAFVKSYSSESTHLKLLEPNARS
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHEECCCCCCEEEEECCCCCC
IDYPTQIVRVSGSLESQQLDCDQVHEEILEKVVAPFTPDKFTYNTYISCSYNPDTNMATG
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCHHH
FLINSYLDPLTDDAVELLETYLAKNNGSNLLGTPLTFEPAKALVVALTISAGMKKNPNKP
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHEEEEEEEECCCCCCCCCCC
PFVEYKQDRSNFYFKSNYEMRNKLFTDIYQNFFTNDPNKILPFLDKWIFVNASSVYEAIL
CCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEHHHHHHHHH
MDSNFVELQPERIFLMENGEQIFVSNLKYYFTHNCNRYSNHRCLQPQA
CCCCCEEECCCEEEEEECCCEEEEECEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA