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The map label for this gene is 52841101

Identifier: 52841101

GI number: 52841101

Start: 939146

End: 939550

Strand: Direct

Name: 52841101

Synonym: lpg0865

Alternate gene names: NA

Gene position: 939146-939550 (Clockwise)

Preceding gene: 52841100

Following gene: 52841104

Centisome position: 27.64

GC content: 46.42

Gene sequence:

>405_bases
ATGAAAAAACTACTATCTGCGTCTGTTATTACTTTGATGATTACCGGATGCGCAGCTATTCCAGCAGATCCTCAGGCCGA
ACGTGTCATTGCAAGCCCGAATCCGGCACCTAAAGGTTGCAAATACGTGGGCCAGGTCGTAGGCAATCAGGGTAATTTCT
TTACCGGAGGCTTTACTTCCAATCGCAATTTGGAAGAGGGAGCAATGAATGATCTGAAGAATAAAGCAAGCAAAAAAGGG
GCAAATTACATTCAATTGGTGACGAACCGAGCCGGTGTAACGGGTTCCATGAGTGGTTCATTTGATCGTCACGGTGGTTT
TATGAGCGGCGGTTCAGAACAAACCAATGTGACTAATCTGGGTAATGCCTATATCTGCCCGCCCAAGGCAATTGGGTTAG
AGTAG

Upstream 100 bases:

>100_bases
GTGAAATATTATCAAGTGCATTTAAAAGTGGGTTGTAATGTTTAATCAAACAGGAGTTGTTAACATTTCATTGTTTTGTT
GATAACAAAAAGGTGTAATT

Downstream 100 bases:

>100_bases
AGTTATTTCAAGAAATTACCCCGGATTAGGCACAAAGCCTGGATCCGGGGATTGACAGGACATGCTTGAAGAAAGGGATG
TAATAATAATGGGCTCATTA

Product: cytochrome c type biogenesis protein CycH

Products: NA

Alternate protein names: Cytochrome C Type Biogenesis Protein CycH; Lipoprotein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKKLLSASVITLMITGCAAIPADPQAERVIASPNPAPKGCKYVGQVVGNQGNFFTGGFTSNRNLEEGAMNDLKNKASKKG
ANYIQLVTNRAGVTGSMSGSFDRHGGFMSGGSEQTNVTNLGNAYICPPKAIGLE

Sequences:

>Translated_134_residues
MKKLLSASVITLMITGCAAIPADPQAERVIASPNPAPKGCKYVGQVVGNQGNFFTGGFTSNRNLEEGAMNDLKNKASKKG
ANYIQLVTNRAGVTGSMSGSFDRHGGFMSGGSEQTNVTNLGNAYICPPKAIGLE
>Mature_134_residues
MKKLLSASVITLMITGCAAIPADPQAERVIASPNPAPKGCKYVGQVVGNQGNFFTGGFTSNRNLEEGAMNDLKNKASKKG
ANYIQLVTNRAGVTGSMSGSFDRHGGFMSGGSEQTNVTNLGNAYICPPKAIGLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13926; Mature: 13926

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLSASVITLMITGCAAIPADPQAERVIASPNPAPKGCKYVGQVVGNQGNFFTGGFTS
CCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCC
NRNLEEGAMNDLKNKASKKGANYIQLVTNRAGVTGSMSGSFDRHGGFMSGGSEQTNVTNL
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
GNAYICPPKAIGLE
CCEEECCCCCCCCC
>Mature Secondary Structure
MKKLLSASVITLMITGCAAIPADPQAERVIASPNPAPKGCKYVGQVVGNQGNFFTGGFTS
CCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCC
NRNLEEGAMNDLKNKASKKGANYIQLVTNRAGVTGSMSGSFDRHGGFMSGGSEQTNVTNL
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
GNAYICPPKAIGLE
CCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA