Click here to switch to the map view.

The map label for this gene is 52841059

Identifier: 52841059

GI number: 52841059

Start: 902082

End: 902456

Strand: Reverse

Name: 52841059

Synonym: lpg0823

Alternate gene names: NA

Gene position: 902456-902082 (Counterclockwise)

Preceding gene: 52841060

Following gene: 52841050

Centisome position: 26.56

GC content: 38.13

Gene sequence:

>375_bases
ATGCTATTCTTAAAAATAAAAACCAATCAGAGAACCACAATGAACATATTGAAACCAAAAGCATTTTTACTAGCCAGTGT
GTTTGTTTTATCAATATCCCCTGCTTTCGCTGCTGATGGTTGTTGCAGTAAAATGGGGGGTATAAATTATTGCGATTCTT
CTGCTGGTCGTCTTGTTTGTAACAACGGTTTCTATTCAACTTGCTACTGCACACGTCATGCCGTAATGGATTTACAATTT
CTTATGGGATGTTGCTTATGGCATGGCGGGGTCTATCCACAATTAAACTCATCGGGTCTTGTGGTTTGCAATGACGGATA
TGTTTCGGAAGAATGTTCATTGCAAAAACCTGTTGAGCAAATTTCTGTTTATTGA

Upstream 100 bases:

>100_bases
AAACCAATTTATCATTTCACTTTGAACTTTTTTGTCCTAATAAATTCAGTCTTAAACTGCAATTAAATCATCATATTTCA
CTAATAATCCATCTAACTCT

Downstream 100 bases:

>100_bases
TTAGGTCTGACTTATTGCTGCTGGAGCATGGGCTGATAAAAGAGCAGGATGGTCTTCTTTTGCGTCCTTGACTCTACGCT
TCTCAATTAACTCACCAAAA

Product: neurogenic locus notch protein homolog precursor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MLFLKIKTNQRTTMNILKPKAFLLASVFVLSISPAFAADGCCSKMGGINYCDSSAGRLVCNNGFYSTCYCTRHAVMDLQF
LMGCCLWHGGVYPQLNSSGLVVCNDGYVSEECSLQKPVEQISVY

Sequences:

>Translated_124_residues
MLFLKIKTNQRTTMNILKPKAFLLASVFVLSISPAFAADGCCSKMGGINYCDSSAGRLVCNNGFYSTCYCTRHAVMDLQF
LMGCCLWHGGVYPQLNSSGLVVCNDGYVSEECSLQKPVEQISVY
>Mature_124_residues
MLFLKIKTNQRTTMNILKPKAFLLASVFVLSISPAFAADGCCSKMGGINYCDSSAGRLVCNNGFYSTCYCTRHAVMDLQF
LMGCCLWHGGVYPQLNSSGLVVCNDGYVSEECSLQKPVEQISVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13588; Mature: 13588

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
12.1 %Cys+Met (Translated Protein)
8.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
12.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLKIKTNQRTTMNILKPKAFLLASVFVLSISPAFAADGCCSKMGGINYCDSSAGRLVC
CEEEEEECCCCCEEEHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEE
NNGFYSTCYCTRHAVMDLQFLMGCCLWHGGVYPQLNSSGLVVCNDGYVSEECSLQKPVEQ
CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHH
ISVY
HCCC
>Mature Secondary Structure
MLFLKIKTNQRTTMNILKPKAFLLASVFVLSISPAFAADGCCSKMGGINYCDSSAGRLVC
CEEEEEECCCCCEEEHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEE
NNGFYSTCYCTRHAVMDLQFLMGCCLWHGGVYPQLNSSGLVVCNDGYVSEECSLQKPVEQ
CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHH
ISVY
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA