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The map label for this gene is yibP [H]

Identifier: 52840745

GI number: 52840745

Start: 539776

End: 540945

Strand: Reverse

Name: yibP [H]

Synonym: lpg0500

Alternate gene names: 52840745

Gene position: 540945-539776 (Counterclockwise)

Preceding gene: 52840746

Following gene: 52840744

Centisome position: 15.92

GC content: 38.21

Gene sequence:

>1170_bases
CTGGTCGTATCCTTCTGGAAAAAAACCATGCGCATCCCTAGCCTATCCAAATCTTTATCCGGTGCTTCTCTTGGTTTGGC
ACTTATGGTCATTCTATTTTTTTGTAATGGCCTTGAGGCAAAAGCTGCTCCAAATTCTATAACTCAAGCACAAACCAAAC
TAAAACAGTTAGATGCCAAGATTAACAAACTAAAGCAAGTTTTAGCCAATGCACAGGATAAACGGACTGTGCTAAACCAA
GAGCTGGGCAGCACTGAAAAACAAATTGGAGAAGGAATACGTAAGCTAAGAATCATACAAGCAAATATGTCCGCAAAAGA
AAAAAGTATTGCCGAATTGCAAGGTAAAATAAATCACTTAAATAAACGATTGCAAGCTCAGCAGGAAATGCTGGCAAATC
ATGTCAGGGCACGTTATCAGATGGGGGAGTATCAACCTTTGAAATGGTTGATTAACCAAGATGAGCCTTTTAAGATCAAC
CGAATTTTAACTTATTATCAGTATATAATAAGATCACGTCAGCAGTTGATTGATGAAATTGCTCGAACCCGACAAAATCT
TAACGACAGTAAAACCAAGCTTGGAAATGAACTTGCAGAAAACAAGCAGCTACAATTTAAGTTGTCACAAAATCAAAAAC
AGCTAGAGCAAAATAAAAGATACCATAGCACACTGATTCAATCCATTGATAATGACATTCAAAATAATCAACAATCATTA
AAAGATTTTCAAAAAGATAGAGACAACTTATCTCATCTCATGAAGTCATTATCTCAACAAAGTGTAATTCAAAGCGGCAA
ACCGTTCACGGGAATGCGCAAAAAATTGCCGTTACCTGTCCAAACCACCCATAGATCTTTACGCAGGATGAATCAAGGAG
TGACATTTTTTGCCGATGAAGGCTCCATAGTTACTGCCGTTTACCCAGGGAAAGTTGTGTTTAGTGATTGGCTAAAAGGT
TATGGTTTGCTTCTGATTATTGACCATGGCCAAGGGTTTATGACTTTATACGCACACAATCAATCTCTCTTCAAACGCAA
AGGACAAATCGTCCAACAAAACGAGCAAATCGCAAGTGTAGGCCATACCGGTGGAATTAAGCAAAACGGTCTATACTTTG
AAATAAGACAAAGAGGAAAAGCGGTCAATCCGTTAGACTGGTTGTCTTAA

Upstream 100 bases:

>100_bases
GTAGGTGGAGGGTGGCACTTCACTCATTCCGAAGGAAGTTTAATCGATATAGCACCTTCTTTGCTTGCATTACTAGGGAT
AACCCCGCCTCCGGAAATGA

Downstream 100 bases:

>100_bases
AGCTTAGCCGCTGGCATTTAAATTGCATAAAAAAATACGCAGGTGGCTAATTTCATGGCCTTGCATCTGAGGAGATCGCT
ATGGTTATTAAGAAACTTTT

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MVVSFWKKTMRIPSLSKSLSGASLGLALMVILFFCNGLEAKAAPNSITQAQTKLKQLDAKINKLKQVLANAQDKRTVLNQ
ELGSTEKQIGEGIRKLRIIQANMSAKEKSIAELQGKINHLNKRLQAQQEMLANHVRARYQMGEYQPLKWLINQDEPFKIN
RILTYYQYIIRSRQQLIDEIARTRQNLNDSKTKLGNELAENKQLQFKLSQNQKQLEQNKRYHSTLIQSIDNDIQNNQQSL
KDFQKDRDNLSHLMKSLSQQSVIQSGKPFTGMRKKLPLPVQTTHRSLRRMNQGVTFFADEGSIVTAVYPGKVVFSDWLKG
YGLLLIIDHGQGFMTLYAHNQSLFKRKGQIVQQNEQIASVGHTGGIKQNGLYFEIRQRGKAVNPLDWLS

Sequences:

>Translated_389_residues
MVVSFWKKTMRIPSLSKSLSGASLGLALMVILFFCNGLEAKAAPNSITQAQTKLKQLDAKINKLKQVLANAQDKRTVLNQ
ELGSTEKQIGEGIRKLRIIQANMSAKEKSIAELQGKINHLNKRLQAQQEMLANHVRARYQMGEYQPLKWLINQDEPFKIN
RILTYYQYIIRSRQQLIDEIARTRQNLNDSKTKLGNELAENKQLQFKLSQNQKQLEQNKRYHSTLIQSIDNDIQNNQQSL
KDFQKDRDNLSHLMKSLSQQSVIQSGKPFTGMRKKLPLPVQTTHRSLRRMNQGVTFFADEGSIVTAVYPGKVVFSDWLKG
YGLLLIIDHGQGFMTLYAHNQSLFKRKGQIVQQNEQIASVGHTGGIKQNGLYFEIRQRGKAVNPLDWLS
>Mature_389_residues
MVVSFWKKTMRIPSLSKSLSGASLGLALMVILFFCNGLEAKAAPNSITQAQTKLKQLDAKINKLKQVLANAQDKRTVLNQ
ELGSTEKQIGEGIRKLRIIQANMSAKEKSIAELQGKINHLNKRLQAQQEMLANHVRARYQMGEYQPLKWLINQDEPFKIN
RILTYYQYIIRSRQQLIDEIARTRQNLNDSKTKLGNELAENKQLQFKLSQNQKQLEQNKRYHSTLIQSIDNDIQNNQQSL
KDFQKDRDNLSHLMKSLSQQSVIQSGKPFTGMRKKLPLPVQTTHRSLRRMNQGVTFFADEGSIVTAVYPGKVVFSDWLKG
YGLLLIIDHGQGFMTLYAHNQSLFKRKGQIVQQNEQIASVGHTGGIKQNGLYFEIRQRGKAVNPLDWLS

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=382, Percent_Identity=27.7486910994764, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=39.3939393939394, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI87082174, Length=99, Percent_Identity=37.3737373737374, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 44491; Mature: 44491

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCEEEEHHCCCCCCCHHCCC
>Mature Secondary Structure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CCCCCCCCCCCEEEEHHCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]