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The map label for this gene is yajR [H]

Identifier: 52840602

GI number: 52840602

Start: 396992

End: 398359

Strand: Reverse

Name: yajR [H]

Synonym: lpg0357

Alternate gene names: 52840602

Gene position: 398359-396992 (Counterclockwise)

Preceding gene: 52840609

Following gene: 52840601

Centisome position: 11.72

GC content: 36.48

Gene sequence:

>1368_bases
ATGAAGTATTCTTGGAACAAAACTGTTTTTCCTATAGCAGCAATATTCTCTTTTCGTCTCCTGGGATTATTTTTACTTAT
CCCTGTATTCACTCTTTATGCCACTAACCTTAAAGGTGCTACTCCAACATTAATTGGCTTGGCTTTGGGAAGCTATGGAT
TGGCACAAGGATTACTACAAATCCCTTTTGGTATGCTTTCAGATAAACTAGGCAGAAAACCTATGATCGCCATAGGTCTA
TTGCTATTCGCTGGAGGAAGCTTGTTAGGAGCAGTAACTCATTCTATTGCTGGAATGATAACTGCCAGAATACTACAGGG
TGCTGGAGCTATAGGTAGCGTGTTAATTGCTTTGCTTGCTGATTTAACCCTGGATGAACAACGTACAAAGGCAATGGCCA
TAGTAGGGATAACTATTGGAACATCATTTAGCCTCGCAATGATAATTAGCCCTGCTCTTACCCACTACTATGGATTATCA
GGAGTGTTCTATCTCACTGCAGCTTTAGCTGTTCTAGGGATTATGATACTTTATCTCATCATTCCCAATCCCTCAAAGGA
GCAGTTTCATGCAGATAGTGAACCCAGCTTATCTCTCATAAAACCAGTGGTAACAGATCAACATTTACAACGCCTCAATT
TTGGAATTTTTTGTCAGCATTTTATTCTTACAGCCACTTTTTTTGCTATACCCATGCTATTGAAATATCAAATTGAGAAT
GGTCATTTACATCAGCAATGGCACTTCTATTTGCCACTCATGTTATTCTCATTTATTTTAATGGTACCCTTTATCATTAT
TTCAGAAAGAAAAAAACGATTAAAAACAGTATTTGTTATATCTGTACTGCTGACTACCTTTACTCAAGGTCTGCTGGTAC
TCGCATCACAAAATTGGTATTGGTTTTGTATTTTAATGTTTGTGTATTTCGTTTCCTTCAATGTTCTTGAAGCAACATTA
CCTTCATTAGTGTCAAAGCTGGCAAGTCCAGGGAGCAAAGGCACAGCAATGGGTATTTATTCAACGAGTCAATTTTTAGG
AATTTTTTTTGGTGGGTCTTTAGCTGGTATTCTTTATCAGTGGTACGATAACCAAGCTATTTTTCTAATTAACATGATTC
TGAGCTGTCTATGGTTCATCATTTCGCTAAGCATGAAATCTAATGTTTATTTTTCTACTCTTATTTTGCCTTTTACAGCA
AATAATGAAGAATCAAAATTGGTAGTCAATCAGCTTTTAAAGGTAGCCGGCATTAAAGAAGTTATTTTGTCCAAAGATGA
AAATACCTTGTATGTTCGAGTAGATAATGAGGAATACTCCACAGGAAGCGCTGAAAAAATTCTTCATCAGTCTACAATTT
ACCAATAA

Upstream 100 bases:

>100_bases
AAATATCGGGACTCTATCAAGCGGAATTTCATAATTTATCTTGTTTCCAAAGCACTTAATTTGTACCATCTCCACATGAT
ATAATTTAGACCTATAATGA

Downstream 100 bases:

>100_bases
CACCTTCTCTTTGGGCTGCTACGAAATAACCGCCAAATTATGTATAATACCTAACTAACTTTCGCATACAGGAGATGATT
TCAATGGCAAGAGGAATAAA

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MKYSWNKTVFPIAAIFSFRLLGLFLLIPVFTLYATNLKGATPTLIGLALGSYGLAQGLLQIPFGMLSDKLGRKPMIAIGL
LLFAGGSLLGAVTHSIAGMITARILQGAGAIGSVLIALLADLTLDEQRTKAMAIVGITIGTSFSLAMIISPALTHYYGLS
GVFYLTAALAVLGIMILYLIIPNPSKEQFHADSEPSLSLIKPVVTDQHLQRLNFGIFCQHFILTATFFAIPMLLKYQIEN
GHLHQQWHFYLPLMLFSFILMVPFIIISERKKRLKTVFVISVLLTTFTQGLLVLASQNWYWFCILMFVYFVSFNVLEATL
PSLVSKLASPGSKGTAMGIYSTSQFLGIFFGGSLAGILYQWYDNQAIFLINMILSCLWFIISLSMKSNVYFSTLILPFTA
NNEESKLVVNQLLKVAGIKEVILSKDENTLYVRVDNEEYSTGSAEKILHQSTIYQ

Sequences:

>Translated_455_residues
MKYSWNKTVFPIAAIFSFRLLGLFLLIPVFTLYATNLKGATPTLIGLALGSYGLAQGLLQIPFGMLSDKLGRKPMIAIGL
LLFAGGSLLGAVTHSIAGMITARILQGAGAIGSVLIALLADLTLDEQRTKAMAIVGITIGTSFSLAMIISPALTHYYGLS
GVFYLTAALAVLGIMILYLIIPNPSKEQFHADSEPSLSLIKPVVTDQHLQRLNFGIFCQHFILTATFFAIPMLLKYQIEN
GHLHQQWHFYLPLMLFSFILMVPFIIISERKKRLKTVFVISVLLTTFTQGLLVLASQNWYWFCILMFVYFVSFNVLEATL
PSLVSKLASPGSKGTAMGIYSTSQFLGIFFGGSLAGILYQWYDNQAIFLINMILSCLWFIISLSMKSNVYFSTLILPFTA
NNEESKLVVNQLLKVAGIKEVILSKDENTLYVRVDNEEYSTGSAEKILHQSTIYQ
>Mature_455_residues
MKYSWNKTVFPIAAIFSFRLLGLFLLIPVFTLYATNLKGATPTLIGLALGSYGLAQGLLQIPFGMLSDKLGRKPMIAIGL
LLFAGGSLLGAVTHSIAGMITARILQGAGAIGSVLIALLADLTLDEQRTKAMAIVGITIGTSFSLAMIISPALTHYYGLS
GVFYLTAALAVLGIMILYLIIPNPSKEQFHADSEPSLSLIKPVVTDQHLQRLNFGIFCQHFILTATFFAIPMLLKYQIEN
GHLHQQWHFYLPLMLFSFILMVPFIIISERKKRLKTVFVISVLLTTFTQGLLVLASQNWYWFCILMFVYFVSFNVLEATL
PSLVSKLASPGSKGTAMGIYSTSQFLGIFFGGSLAGILYQWYDNQAIFLINMILSCLWFIISLSMKSNVYFSTLILPFTA
NNEESKLVVNQLLKVAGIKEVILSKDENTLYVRVDNEEYSTGSAEKILHQSTIYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=448, Percent_Identity=39.9553571428571, Blast_Score=352, Evalue=3e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50346; Mature: 50346

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSWNKTVFPIAAIFSFRLLGLFLLIPVFTLYATNLKGATPTLIGLALGSYGLAQGLLQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IPFGMLSDKLGRKPMIAIGLLLFAGGSLLGAVTHSIAGMITARILQGAGAIGSVLIALLA
CCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DLTLDEQRTKAMAIVGITIGTSFSLAMIISPALTHYYGLSGVFYLTAALAVLGIMILYLI
HCCCCHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPNPSKEQFHADSEPSLSLIKPVVTDQHLQRLNFGIFCQHFILTATFFAIPMLLKYQIEN
CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECC
GHLHQQWHFYLPLMLFSFILMVPFIIISERKKRLKTVFVISVLLTTFTQGLLVLASQNWY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHH
WFCILMFVYFVSFNVLEATLPSLVSKLASPGSKGTAMGIYSTSQFLGIFFGGSLAGILYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHH
WYDNQAIFLINMILSCLWFIISLSMKSNVYFSTLILPFTANNEESKLVVNQLLKVAGIKE
HHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCHHH
VILSKDENTLYVRVDNEEYSTGSAEKILHQSTIYQ
HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKYSWNKTVFPIAAIFSFRLLGLFLLIPVFTLYATNLKGATPTLIGLALGSYGLAQGLLQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IPFGMLSDKLGRKPMIAIGLLLFAGGSLLGAVTHSIAGMITARILQGAGAIGSVLIALLA
CCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DLTLDEQRTKAMAIVGITIGTSFSLAMIISPALTHYYGLSGVFYLTAALAVLGIMILYLI
HCCCCHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPNPSKEQFHADSEPSLSLIKPVVTDQHLQRLNFGIFCQHFILTATFFAIPMLLKYQIEN
CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECC
GHLHQQWHFYLPLMLFSFILMVPFIIISERKKRLKTVFVISVLLTTFTQGLLVLASQNWY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHH
WFCILMFVYFVSFNVLEATLPSLVSKLASPGSKGTAMGIYSTSQFLGIFFGGSLAGILYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHH
WYDNQAIFLINMILSCLWFIISLSMKSNVYFSTLILPFTANNEESKLVVNQLLKVAGIKE
HHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCHHH
VILSKDENTLYVRVDNEEYSTGSAEKILHQSTIYQ
HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]