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The map label for this gene is rbsB [C]

Identifier: 52840439

GI number: 52840439

Start: 214503

End: 215387

Strand: Reverse

Name: rbsB [C]

Synonym: lpg0184

Alternate gene names: 52840439

Gene position: 215387-214503 (Counterclockwise)

Preceding gene: 52840440

Following gene: 52840437

Centisome position: 6.34

GC content: 37.4

Gene sequence:

>885_bases
ATGAAAAAATTGGCATCAACTCTCTTGTGTTTCTCGCTACTGATAAGCGCCTCTGTCTTTGCGAGAGATAAATATTATTT
GATAACCCATGGTTCACAAGATCCTTATTGGACATCTTTATTCCAGGGAGCAAAAAAAGCTGCTGAAGAACTGAAAGTCG
ATTTACAAATTTTAGCTCCTCCAGGAGCCAATGATGTACCCAAACAGGTTCAATTCATAGAGAGCGCACTGGCTACCTAT
CCTTCTGGAATTGCTACTACCATTCCTTCAGACACAGCTTTTAGCAAAAGCCTGCAAAGGGCAAATAAACTTAATATTCC
TGTTATTGCCGTTGATACCAGACCAAAAGACAAAACAAAAAATCCTTACCTGGTCTTTTTAGGTTCTGATAACCTACTCG
CAGGCAAGAAACTTGGTGAAAAAGCTCTGGAATTAACTCCAAGCGCTAAAAGAGCACTAGTTCTTAACCCACAACCCGGC
CATATAGGGCTCGAAAAGCGTGCCTATGGAATTAAGACCATTCTTCAAGATAAAGGAATCTTTTTTGAGGAACTTGATGT
AGGTACTGATCCTAATCAAGTACAATCCAGAGTCAAATCTTACTTTAAGATACATCCAGAAACGAATATTATTTTTTGCC
TAACCTCACAAGCACTAGATCCACTTGGACAAATGTTATTACACCCCGACAGGTATGATTTTAATTATCAACCTCAAGTC
TATTCCTTTGATAAAACACCCAATACTGTTTCTTTAATTCATAAAAAACTGGTGAATTATGTAATGGATCAACAACCATT
TCTAATGGGTTATTTAAGTATCACCCAACTGGTATTGATGAACCGATATCAATTGAATCCAGTAAATATCAATACTGCAA
TGTAA

Upstream 100 bases:

>100_bases
TCCAGCTCATATACAAAATACCGCACACAAAGTGATCAAGCTTAGTTGCGGAACAATAGAAATAATGGAATTAACTAACA
CGCTCATTAAGGGTTAAACT

Downstream 100 bases:

>100_bases
ATTGCAGTATATGTGTTATATTCCAGCCAATGACTTGTTGCTTTTTGATAGTGTCATGGGTAATTTCGAACGCTTCCAGG
AAACCACTTGCAATCAAAAT

Product: ABC sugar transporter, periplasmic sugar binding protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: ABC-Type Sugar Transport System; Twin-Arginine Translocation Pathway Signal

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKKLASTLLCFSLLISASVFARDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATY
PSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELTPSAKRALVLNPQPG
HIGLEKRAYGIKTILQDKGIFFEELDVGTDPNQVQSRVKSYFKIHPETNIIFCLTSQALDPLGQMLLHPDRYDFNYQPQV
YSFDKTPNTVSLIHKKLVNYVMDQQPFLMGYLSITQLVLMNRYQLNPVNINTAM

Sequences:

>Translated_294_residues
MKKLASTLLCFSLLISASVFARDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATY
PSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELTPSAKRALVLNPQPG
HIGLEKRAYGIKTILQDKGIFFEELDVGTDPNQVQSRVKSYFKIHPETNIIFCLTSQALDPLGQMLLHPDRYDFNYQPQV
YSFDKTPNTVSLIHKKLVNYVMDQQPFLMGYLSITQLVLMNRYQLNPVNINTAM
>Mature_294_residues
MKKLASTLLCFSLLISASVFARDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATY
PSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELTPSAKRALVLNPQPG
HIGLEKRAYGIKTILQDKGIFFEELDVGTDPNQVQSRVKSYFKIHPETNIIFCLTSQALDPLGQMLLHPDRYDFNYQPQV
YSFDKTPNTVSLIHKKLVNYVMDQQPFLMGYLSITQLVLMNRYQLNPVNINTAM

Specific function: Involved In The High-Affinity D-Ribose Membrane Transport System And Also Serves As The Primary Chemoreceptor For Chemotaxis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790192, Length=284, Percent_Identity=23.943661971831, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788898, Length=180, Percent_Identity=25.5555555555556, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32882; Mature: 32882

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLASTLLCFSLLISASVFARDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAP
CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEECC
PGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKTK
CCCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCC
NPYLVFLGSDNLLAGKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDKGI
CCEEEEECCCCEECCHHHCHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
FFEELDVGTDPNQVQSRVKSYFKIHPETNIIFCLTSQALDPLGQMLLHPDRYDFNYQPQV
EEEECCCCCCHHHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCE
YSFDKTPNTVSLIHKKLVNYVMDQQPFLMGYLSITQLVLMNRYQLNPVNINTAM
EECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEECCCEECCCCC
>Mature Secondary Structure
MKKLASTLLCFSLLISASVFARDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAP
CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEECC
PGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKTK
CCCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCC
NPYLVFLGSDNLLAGKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDKGI
CCEEEEECCCCEECCHHHCHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
FFEELDVGTDPNQVQSRVKSYFKIHPETNIIFCLTSQALDPLGQMLLHPDRYDFNYQPQV
EEEECCCCCCHHHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCE
YSFDKTPNTVSLIHKKLVNYVMDQQPFLMGYLSITQLVLMNRYQLNPVNINTAM
EECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEECCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA