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The map label for this gene is 52840279

Identifier: 52840279

GI number: 52840279

Start: 29788

End: 30330

Strand: Reverse

Name: 52840279

Synonym: lpg0023

Alternate gene names: NA

Gene position: 30330-29788 (Counterclockwise)

Preceding gene: 52840280

Following gene: 52840268

Centisome position: 0.89

GC content: 37.02

Gene sequence:

>543_bases
ATGAAATCGTTTATTGAGCAAGCTCAATTCTATGCAACCTACCACCAAAACCAGGCGACACGTTATACACATATGGCAGG
AGTCCCGTTAATCATGCTTTCTATCATGATTTTTCTGGGATTTGTTAAAATAGTTATTCCAGGTGTTTATGCAACTGATC
TTGCTTGTTTGGCTACGCTTGCCACTCTCATTTATTACTTCCTATTAAACTGGCAACTTGCCTTGGCATTAACTCCCATT
TTGATCTTTTTGTTATGGCTGGCCAGTTGGTTTAACTATGATGGCCCAACGAAATTCGGACTTTGGGTATTTATTATTAC
TTTTGTTGTAGGCTGGGGATTGCAATTTTACGGTCATTTTATTGAAGGAAAAAAACCTGCTTTTATGGTTAATTTTACCC
AAGCCCTTATTGCGCCTTTGTATTTAACAGCGGAATTGTTCTTTATGGCAGGACTAATGAATTCCCTGAGAGAACAAATT
TACGGGAACGAAGAAGTAAATACTGAAGAAATAAGCAAAACCAAAACAAAATCCAAATCTTAA

Upstream 100 bases:

>100_bases
TGATTTAACGAATAGTTAAGAACTCCTCCTCTCTTTTTGGTACTTCTTTATTTTATGTGCTATGTTTTCTTCATGACCCT
AACTTCAGGATGAAAAGAAA

Downstream 100 bases:

>100_bases
AGAGAGTCGAGCTTCACGCTTATGAAAGGGAAGCTCGGCAAGAGATCTAATAATAAATAACTGAATTATTCAGTTATCCG
CAAAATGCGGCATTACAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKSFIEQAQFYATYHQNQATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATLATLIYYFLLNWQLALALTPI
LIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHFIEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMNSLREQI
YGNEEVNTEEISKTKTKSKS

Sequences:

>Translated_180_residues
MKSFIEQAQFYATYHQNQATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATLATLIYYFLLNWQLALALTPI
LIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHFIEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMNSLREQI
YGNEEVNTEEISKTKTKSKS
>Mature_180_residues
MKSFIEQAQFYATYHQNQATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATLATLIYYFLLNWQLALALTPI
LIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHFIEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMNSLREQI
YGNEEVNTEEISKTKTKSKS

Specific function: Unknown

COG id: COG4539

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20600; Mature: 20600

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFIEQAQFYATYHQNQATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATL
CHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ATLIYYFLLNWQLALALTPILIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMNSLREQIYGNEEVNTEEISKTKTKSKS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKSFIEQAQFYATYHQNQATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATL
CHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ATLIYYFLLNWQLALALTPILIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMNSLREQIYGNEEVNTEEISKTKTKSKS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA