Click here to switch to the map view.

The map label for this gene is 52840268

Identifier: 52840268

GI number: 52840268

Start: 15332

End: 16909

Strand: Reverse

Name: 52840268

Synonym: lpg0012

Alternate gene names: NA

Gene position: 16909-15332 (Counterclockwise)

Preceding gene: 52840279

Following gene: 52840267

Centisome position: 0.5

GC content: 41.19

Gene sequence:

>1578_bases
ATGAACACAACGGAACATACAGAGCTGGGCAATGGTTTGCTCATGGATAAAATCGAAGGCAATCCATATTTACGAATAGA
TGAGTTTGGCGTGCTCCATCTGCGACTTCAACGATTCGGTGAAAACAACCTGCCTGAGCCAATGGAGCTGGAGATGTCCG
CTGGCGAAATTATTGCCATGGCGGGTGACTACTTTACACAGGCTAATTGGACTATGGATTTGGATCTGCCCAAATGCGAG
CTATTCAACTCCCCGGCAGAATTGGGAAAACACCTCATTCGCAAACCTATAGATCCTAAAGAAGAGAATGCTTTAATTAC
AGCATACAATAACCTGGCTGCTCCTGATGTTACTCGAAAAGAAATTGATCGCATTTATTCCATTAATAATGCTAACTATG
TGCCCTTTTCGCCTACGTTGAATTTCTATGCTCAACAACTGATGTATTATTTTCGCGTCAAAGACTATGGGGAAATGCTT
GTTCGGAACCAAACTCATTTTACGCCATGGTCTATTCGAGTTTATATATTGGGTCACGCTATCGCATTGAGATATGCACG
TTTATCCTACGAATTAAAACAATTGGCTACCGACAGAAACTATCAATCAGATAACCCTGACTTGAGTACTTTAAAAATCT
CATTACAAAATAAGAATGAAACTCTTTCAAGCAATACCCTGCTTGATTTGGCGAATCGCTATCACGCCCAAGCTTATTCT
ATAGAGCTGTTTACTTTTCACTACTATTCTGATCATTTTGCTACAGGACATATGTCCATGATTGGCGATTTACGTGTCGT
ATTAAAAGAGCGTTTCGGAGTATGGGGCAATATCCTGGCTAATAATCTTCATGATGAAGTAAATCGTGTTGGAGTTTATA
CAGTGAGACCCTATGATCCAACCCCTAATACAACAGAGGCTCCGTCTCGAGCACGTGGGGATGGGAAATTTGATACCTGC
CTTAATCAATTTAACCGTTTAGCTTGCCTAAACGGTATGACCGCATCACTAAAGGACATCAATCAAGTATTATCAGGAGG
TGTAATACCGGAGCAAAAAAAATTCGGTGGTTTGGTGCATATGCCCGACGTTGATTTTAACTCAAGACAACATCAACCAT
TGCTGGTTTTAAGTAAAGGAAAAGTATATTACCGCAACAATCTCAGTCAAATTCACATAATTTCTCCTTCTGAATATGAG
GCACTCAGAGAAAACCCTGAAAAACATGGGTATAAAGAGCTAACCAGTAAATGGGCTGCCTTTAAATTAGTTACCAAATT
ACGTCTCTTTCCTTATCTTTATGACGGCTCGGTTATGCCTGTTTCTGATGAAAAGCTCGCCGAAATTATCGCAGATGAAA
AACGCAGAAATCCACAACGAGCTCCCATCCCCACACCATCATGCCTTCCGGAAAGCGAACCAACTGTATTCGATTGGCGA
ACAAAAGCGAGCTGGCGTAATAATAAAGACTCTCTGGATATTTTGGATGGGTTAAAGAAACACAGTATTTTGGCAGCAAA
ACAAACCCATTCGGCCATTCAAGAGGAAGAAGAGGTCCGGTTGAATTTGGGAGTCTGA

Upstream 100 bases:

>100_bases
TAGTATGGTTTCCTAATTGATTTACTATTATTTAAACTATTGGCACGTTCAGTTATCAAGGATATGATGAAAATAGACTC
TAAGGATAGGAGCAGAATTT

Downstream 100 bases:

>100_bases
TTGTTTCCTGATAAACTAGTGGCCTATTGTTACTATTTAACTTTTAGTAACCCATTTGAGCTGTCTTAAAGTTAGTAAGT
TGGACATAAGCAAATACATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MNTTEHTELGNGLLMDKIEGNPYLRIDEFGVLHLRLQRFGENNLPEPMELEMSAGEIIAMAGDYFTQANWTMDLDLPKCE
LFNSPAELGKHLIRKPIDPKEENALITAYNNLAAPDVTRKEIDRIYSINNANYVPFSPTLNFYAQQLMYYFRVKDYGEML
VRNQTHFTPWSIRVYILGHAIALRYARLSYELKQLATDRNYQSDNPDLSTLKISLQNKNETLSSNTLLDLANRYHAQAYS
IELFTFHYYSDHFATGHMSMIGDLRVVLKERFGVWGNILANNLHDEVNRVGVYTVRPYDPTPNTTEAPSRARGDGKFDTC
LNQFNRLACLNGMTASLKDINQVLSGGVIPEQKKFGGLVHMPDVDFNSRQHQPLLVLSKGKVYYRNNLSQIHIISPSEYE
ALRENPEKHGYKELTSKWAAFKLVTKLRLFPYLYDGSVMPVSDEKLAEIIADEKRRNPQRAPIPTPSCLPESEPTVFDWR
TKASWRNNKDSLDILDGLKKHSILAAKQTHSAIQEEEEVRLNLGV

Sequences:

>Translated_525_residues
MNTTEHTELGNGLLMDKIEGNPYLRIDEFGVLHLRLQRFGENNLPEPMELEMSAGEIIAMAGDYFTQANWTMDLDLPKCE
LFNSPAELGKHLIRKPIDPKEENALITAYNNLAAPDVTRKEIDRIYSINNANYVPFSPTLNFYAQQLMYYFRVKDYGEML
VRNQTHFTPWSIRVYILGHAIALRYARLSYELKQLATDRNYQSDNPDLSTLKISLQNKNETLSSNTLLDLANRYHAQAYS
IELFTFHYYSDHFATGHMSMIGDLRVVLKERFGVWGNILANNLHDEVNRVGVYTVRPYDPTPNTTEAPSRARGDGKFDTC
LNQFNRLACLNGMTASLKDINQVLSGGVIPEQKKFGGLVHMPDVDFNSRQHQPLLVLSKGKVYYRNNLSQIHIISPSEYE
ALRENPEKHGYKELTSKWAAFKLVTKLRLFPYLYDGSVMPVSDEKLAEIIADEKRRNPQRAPIPTPSCLPESEPTVFDWR
TKASWRNNKDSLDILDGLKKHSILAAKQTHSAIQEEEEVRLNLGV
>Mature_525_residues
MNTTEHTELGNGLLMDKIEGNPYLRIDEFGVLHLRLQRFGENNLPEPMELEMSAGEIIAMAGDYFTQANWTMDLDLPKCE
LFNSPAELGKHLIRKPIDPKEENALITAYNNLAAPDVTRKEIDRIYSINNANYVPFSPTLNFYAQQLMYYFRVKDYGEML
VRNQTHFTPWSIRVYILGHAIALRYARLSYELKQLATDRNYQSDNPDLSTLKISLQNKNETLSSNTLLDLANRYHAQAYS
IELFTFHYYSDHFATGHMSMIGDLRVVLKERFGVWGNILANNLHDEVNRVGVYTVRPYDPTPNTTEAPSRARGDGKFDTC
LNQFNRLACLNGMTASLKDINQVLSGGVIPEQKKFGGLVHMPDVDFNSRQHQPLLVLSKGKVYYRNNLSQIHIISPSEYE
ALRENPEKHGYKELTSKWAAFKLVTKLRLFPYLYDGSVMPVSDEKLAEIIADEKRRNPQRAPIPTPSCLPESEPTVFDWR
TKASWRNNKDSLDILDGLKKHSILAAKQTHSAIQEEEEVRLNLGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60095; Mature: 60095

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTEHTELGNGLLMDKIEGNPYLRIDEFGVLHLRLQRFGENNLPEPMELEMSAGEIIAM
CCCCCCCCCCCCEEEEEECCCCEEEEECCCEEEHHHHHHCCCCCCCCCEEECCCCCEEEE
AGDYFTQANWTMDLDLPKCELFNSPAELGKHLIRKPIDPKEENALITAYNNLAAPDVTRK
ECCCEECCCCEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHH
EIDRIYSINNANYVPFSPTLNFYAQQLMYYFRVKDYGEMLVRNQTHFTPWSIRVYILGHA
HHHHHEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHH
IALRYARLSYELKQLATDRNYQSDNPDLSTLKISLQNKNETLSSNTLLDLANRYHAQAYS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCEEEE
IELFTFHYYSDHFATGHMSMIGDLRVVLKERFGVWGNILANNLHDEVNRVGVYTVRPYDP
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEEECCCC
TPNTTEAPSRARGDGKFDTCLNQFNRLACLNGMTASLKDINQVLSGGVIPEQKKFGGLVH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCEEE
MPDVDFNSRQHQPLLVLSKGKVYYRNNLSQIHIISPSEYEALRENPEKHGYKELTSKWAA
CCCCCCCCCCCCCEEEEECCEEEEECCCCEEEEECCCHHHHHHCCCHHCCHHHHHHHHHH
FKLVTKLRLFPYLYDGSVMPVSDEKLAEIIADEKRRNPQRAPIPTPSCLPESEPTVFDWR
HHHHHHHHHHHEEECCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
TKASWRNNKDSLDILDGLKKHSILAAKQTHSAIQEEEEVRLNLGV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
>Mature Secondary Structure
MNTTEHTELGNGLLMDKIEGNPYLRIDEFGVLHLRLQRFGENNLPEPMELEMSAGEIIAM
CCCCCCCCCCCCEEEEEECCCCEEEEECCCEEEHHHHHHCCCCCCCCCEEECCCCCEEEE
AGDYFTQANWTMDLDLPKCELFNSPAELGKHLIRKPIDPKEENALITAYNNLAAPDVTRK
ECCCEECCCCEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHH
EIDRIYSINNANYVPFSPTLNFYAQQLMYYFRVKDYGEMLVRNQTHFTPWSIRVYILGHA
HHHHHEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHH
IALRYARLSYELKQLATDRNYQSDNPDLSTLKISLQNKNETLSSNTLLDLANRYHAQAYS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCEEEE
IELFTFHYYSDHFATGHMSMIGDLRVVLKERFGVWGNILANNLHDEVNRVGVYTVRPYDP
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEEECCCC
TPNTTEAPSRARGDGKFDTCLNQFNRLACLNGMTASLKDINQVLSGGVIPEQKKFGGLVH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCEEE
MPDVDFNSRQHQPLLVLSKGKVYYRNNLSQIHIISPSEYEALRENPEKHGYKELTSKWAA
CCCCCCCCCCCCCEEEEECCEEEEECCCCEEEEECCCHHHHHHCCCHHCCHHHHHHHHHH
FKLVTKLRLFPYLYDGSVMPVSDEKLAEIIADEKRRNPQRAPIPTPSCLPESEPTVFDWR
HHHHHHHHHHHEEECCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
TKASWRNNKDSLDILDGLKKHSILAAKQTHSAIQEEEEVRLNLGV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA