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The map label for this gene is aguA

Identifier: 52840261

GI number: 52840261

Start: 7271

End: 8317

Strand: Reverse

Name: aguA

Synonym: lpg0005

Alternate gene names: 52840261

Gene position: 8317-7271 (Counterclockwise)

Preceding gene: 52840262

Following gene: NA

Centisome position: 0.24

GC content: 39.35

Gene sequence:

>1047_bases
GTGAATATGAATACAGCACCCAAACAATATGGTTTTTATATGCCTGCTGAATGGTATCCTCATGAACGATGCTGGATGGC
ATGGCCCTGTCACCATGAAACCTGGTCCAAAATAGGGCTAGACAAGGCTAAAATGGCCTATGCACGTGTTGCAAAAGCTA
TAGCTCAATTTGAGCCCGTTACTTTATTAGTAAACCCAGGAGATGAAGATTCCGCAGAGAATTTATGCAAAGGCCATAAT
ATTGAAATTATCTCTTTGCCAATTAACGATTCGTGGACCCGCGATACGGGGGCTACCTTTTTAATTAATAATGAAAGGCA
GCTTGCCGGAGTTGACTGGATACATAATGCTTGGGGTGGAAATTACGCTGACTGTTCTTTGGATAATTTAATAGCTTCTC
ATCTAATAAAATACACTGAAGCTCAATACTTTCATGCGCCATTGGTCATGGAAGGTGGTTCCTTTCATGTAGATGGTGAG
GGGACTATTTTGACAAGCAAAGAGTGTTTGTTAAATTCCAATCGAAATCCACATTTATCTCAACAGGAAATCGAACAGTA
CCTTATTAATTATCTGGGTGCTGAGCGTATTATTTGGCTGAACATGGGATTGATAGGTGATGAAACAGATGGTCATGTTG
ACGAAATAGCAACATTTATTGCTCCTGGAAAGGTGTTATGCCTTATTACCAAGGATAAGGAAGATCCTAACTACCATCGC
TTGCAGGAAAACTTTGAAATTCTCAAATCATCTAAGGATGCCAGAGGACGAACATTTGAGGTCTATACTGTTGAGCAACC
ACCTGCAACTTACCTTAACGGAGAAAGGCTCACTCTCTCGTACATCAATTTTTACATGGCTAATCAAGGTATTGTGATGC
CTGCTTTTGGATATGAATCATTTGACAGATTAGCCTATCAGTTATTCGTACAAATTTTTCCAGGATATCAAATTACACAA
ATTGATGCACTCGATGTATTTTCTGGTGGTGGTGGTATCCATTGTATTACACAACAACAACCTAAATCTCATAAATTAGT
GGAGTAA

Upstream 100 bases:

>100_bases
TAATTAAATCTGAACTTCCTAAGGAAAAGGCACTCTCTTACTTAAACGAATTAAGAAGTATTTTTTCTCAATTAACTTAC
CTTGATGGAAATATAGCACA

Downstream 100 bases:

>100_bases
TGACGAAGACAATGCCACTTCTTAATTGAGAAATTTCTTACATATTACTGCTCATTATACTCGATGACATATACTGCCAA
TTGGTTATACTAAAAACATA

Product: peptidylarginine deiminase

Products: NA

Alternate protein names: Agmatine iminohydrolase

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MNMNTAPKQYGFYMPAEWYPHERCWMAWPCHHETWSKIGLDKAKMAYARVAKAIAQFEPVTLLVNPGDEDSAENLCKGHN
IEIISLPINDSWTRDTGATFLINNERQLAGVDWIHNAWGGNYADCSLDNLIASHLIKYTEAQYFHAPLVMEGGSFHVDGE
GTILTSKECLLNSNRNPHLSQQEIEQYLINYLGAERIIWLNMGLIGDETDGHVDEIATFIAPGKVLCLITKDKEDPNYHR
LQENFEILKSSKDARGRTFEVYTVEQPPATYLNGERLTLSYINFYMANQGIVMPAFGYESFDRLAYQLFVQIFPGYQITQ
IDALDVFSGGGGIHCITQQQPKSHKLVE

Sequences:

>Translated_348_residues
MNMNTAPKQYGFYMPAEWYPHERCWMAWPCHHETWSKIGLDKAKMAYARVAKAIAQFEPVTLLVNPGDEDSAENLCKGHN
IEIISLPINDSWTRDTGATFLINNERQLAGVDWIHNAWGGNYADCSLDNLIASHLIKYTEAQYFHAPLVMEGGSFHVDGE
GTILTSKECLLNSNRNPHLSQQEIEQYLINYLGAERIIWLNMGLIGDETDGHVDEIATFIAPGKVLCLITKDKEDPNYHR
LQENFEILKSSKDARGRTFEVYTVEQPPATYLNGERLTLSYINFYMANQGIVMPAFGYESFDRLAYQLFVQIFPGYQITQ
IDALDVFSGGGGIHCITQQQPKSHKLVE
>Mature_348_residues
MNMNTAPKQYGFYMPAEWYPHERCWMAWPCHHETWSKIGLDKAKMAYARVAKAIAQFEPVTLLVNPGDEDSAENLCKGHN
IEIISLPINDSWTRDTGATFLINNERQLAGVDWIHNAWGGNYADCSLDNLIASHLIKYTEAQYFHAPLVMEGGSFHVDGE
GTILTSKECLLNSNRNPHLSQQEIEQYLINYLGAERIIWLNMGLIGDETDGHVDEIATFIAPGKVLCLITKDKEDPNYHR
LQENFEILKSSKDARGRTFEVYTVEQPPATYLNGERLTLSYINFYMANQGIVMPAFGYESFDRLAYQLFVQIFPGYQITQ
IDALDVFSGGGGIHCITQQQPKSHKLVE

Specific function: Unknown

COG id: COG2957

COG function: function code E; Peptidylarginine deiminase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the agmatine deiminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AGUA_LEGPH (Q5ZZK4)

Other databases:

- EMBL:   AE017354
- RefSeq:   YP_094060.1
- ProteinModelPortal:   Q5ZZK4
- SMR:   Q5ZZK4
- STRING:   Q5ZZK4
- GeneID:   3079357
- GenomeReviews:   AE017354_GR
- KEGG:   lpn:lpg0005
- NMPDR:   fig|272624.3.peg.37
- eggNOG:   COG2957
- HOGENOM:   HBG668771
- OMA:   CWMAWPC
- ProtClustDB:   CLSK929498
- BioCyc:   LPNE272624:LPG0005-MONOMER
- HAMAP:   MF_01841
- InterPro:   IPR017754
- InterPro:   IPR007466

Pfam domain/function: PF04371 PAD_porph

EC number: =3.5.3.12

Molecular weight: Translated: 39479; Mature: 39479

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: ACT_SITE 335-335

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMNTAPKQYGFYMPAEWYPHERCWMAWPCHHETWSKIGLDKAKMAYARVAKAIAQFEPV
CCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCE
TLLVNPGDEDSAENLCKGHNIEIISLPINDSWTRDTGATFLINNERQLAGVDWIHNAWGG
EEEECCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCEEEECCCCEEECCHHHHHCCCC
NYADCSLDNLIASHLIKYTEAQYFHAPLVMEGGSFHVDGEGTILTSKECLLNSNRNPHLS
CCCCCCHHHHHHHHHHHHHCCCEEECCEEEECCEEEECCCCEEEECHHHHHCCCCCCCCC
QQEIEQYLINYLGAERIIWLNMGLIGDETDGHVDEIATFIAPGKVLCLITKDKEDPNYHR
HHHHHHHHHHHHCCCEEEEEEECEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCHHH
LQENFEILKSSKDARGRTFEVYTVEQPPATYLNGERLTLSYINFYMANQGIVMPAFGYES
HHHHHHHHHCCCCCCCCEEEEEEECCCCCHHCCCCEEEEEEEEEEEECCCEEEEECCCHH
FDRLAYQLFVQIFPGYQITQIDALDVFSGGGGIHCITQQQPKSHKLVE
HHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MNMNTAPKQYGFYMPAEWYPHERCWMAWPCHHETWSKIGLDKAKMAYARVAKAIAQFEPV
CCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCE
TLLVNPGDEDSAENLCKGHNIEIISLPINDSWTRDTGATFLINNERQLAGVDWIHNAWGG
EEEECCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCEEEECCCCEEECCHHHHHCCCC
NYADCSLDNLIASHLIKYTEAQYFHAPLVMEGGSFHVDGEGTILTSKECLLNSNRNPHLS
CCCCCCHHHHHHHHHHHHHCCCEEECCEEEECCEEEECCCCEEEECHHHHHCCCCCCCCC
QQEIEQYLINYLGAERIIWLNMGLIGDETDGHVDEIATFIAPGKVLCLITKDKEDPNYHR
HHHHHHHHHHHHCCCEEEEEEECEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCHHH
LQENFEILKSSKDARGRTFEVYTVEQPPATYLNGERLTLSYINFYMANQGIVMPAFGYES
HHHHHHHHHCCCCCCCCEEEEEEECCCCCHHCCCCEEEEEEEEEEEECCCEEEEECCCHH
FDRLAYQLFVQIFPGYQITQIDALDVFSGGGGIHCITQQQPKSHKLVE
HHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA