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The map label for this gene is gntR [H]

Identifier: 52787963

GI number: 52787963

Start: 4132268

End: 4132999

Strand: Direct

Name: gntR [H]

Synonym: BLi04286

Alternate gene names: 52787963

Gene position: 4132268-4132999 (Clockwise)

Preceding gene: 52787961

Following gene: 52787964

Centisome position: 97.86

GC content: 42.35

Gene sequence:

>732_bases
ATGAGCGAATCTAAAGGCCTTTTATATCCGGAGAAGTGGCTTTCTAGAGCTTCAACTGGTGTTCGCGTCGCATGCGAGCT
GAGAATGCGCATTATTTCCGGTTTGATTGAAAGCGGTACCATTTTATCTGAAAATAAATTGGCTGCGGAATTCTCGGTGA
GCCGGTCTCCCATCCGCGAGGCTTTAAAAATACTGGCATCGGAAAAAATCATCCGTTTGGAACGGATGGGGGCCGTTGTC
ATCGGTTTAACCGAAAAAGAAATAGGAGAAATTTATGATGTGCGCCTGGTGATGGAAACATTCGTATTCGAACGGCTTGG
ACAGGCCAATGTCGACGAACTGGTAACAGACCTCAGCAAAATATTGGAGATGATGAAAGTCTCCATCAAATACAAAGATG
CCGACGAGTTCTCATTTCAAGACGTCTTATTTCACGAAACGATTGTCCGCTCCATCAATCATTCTTACATTTTGATGATA
TGGAACAATCTCAAACCTGTGATGGAAAGCTTTATTCTTTTATCCATGCGGGCCCGCTTAAAAGAAAAATACGAAGACTT
TGAACGAATTCTCGATAACCATGAACTTTATATTCAAGCGATCAAAACGAAAGACAGGGATCTGATGCTTAAATCCCTAC
ATCAAAATTTCGATGACGTACAAGGTAAAGTTGAAGATCTATGGCTGTCGCAACAAATGCTGGCGAAAGGAGCCGAACAA
CAAAATGACTAG

Upstream 100 bases:

>100_bases
ATTCTTCGAAAAATTTAAAATGAAAGTGTTTGCATAATCAAAATAATCGCGTTATCATACTTGTATACAAGTATACTCGT
ATAACTAGGAAGGTGAGTGT

Downstream 100 bases:

>100_bases
TTATATGTTAGGCATAGATATCGGTACGACAAGCACGAAAGCGGTTTTATTCAGTGAAAAAGGGGACGTGATCCAAAAGG
AAAGCATCGGCTACCCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: P28 protein [H]

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSESKGLLYPEKWLSRASTGVRVACELRMRIISGLIESGTILSENKLAAEFSVSRSPIREALKILASEKIIRLERMGAVV
IGLTEKEIGEIYDVRLVMETFVFERLGQANVDELVTDLSKILEMMKVSIKYKDADEFSFQDVLFHETIVRSINHSYILMI
WNNLKPVMESFILLSMRARLKEKYEDFERILDNHELYIQAIKTKDRDLMLKSLHQNFDDVQGKVEDLWLSQQMLAKGAEQ
QND

Sequences:

>Translated_243_residues
MSESKGLLYPEKWLSRASTGVRVACELRMRIISGLIESGTILSENKLAAEFSVSRSPIREALKILASEKIIRLERMGAVV
IGLTEKEIGEIYDVRLVMETFVFERLGQANVDELVTDLSKILEMMKVSIKYKDADEFSFQDVLFHETIVRSINHSYILMI
WNNLKPVMESFILLSMRARLKEKYEDFERILDNHELYIQAIKTKDRDLMLKSLHQNFDDVQGKVEDLWLSQQMLAKGAEQ
QND
>Mature_242_residues
SESKGLLYPEKWLSRASTGVRVACELRMRIISGLIESGTILSENKLAAEFSVSRSPIREALKILASEKIIRLERMGAVVI
GLTEKEIGEIYDVRLVMETFVFERLGQANVDELVTDLSKILEMMKVSIKYKDADEFSFQDVLFHETIVRSINHSYILMIW
NNLKPVMESFILLSMRARLKEKYEDFERILDNHELYIQAIKTKDRDLMLKSLHQNFDDVQGKVEDLWLSQQMLAKGAEQQ
ND

Specific function: Transcriptional repressor of the gluconate operon (gntRKPZ), which encodes the proteins for gluconate utilization. Represses mRNA synthesis by binding to the gnt operator; the binding is suppressed by gluconate or glucono-delta-lactone [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28123; Mature: 27992

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESKGLLYPEKWLSRASTGVRVACELRMRIISGLIESGTILSENKLAAEFSVSRSPIRE
CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHCCHHHHHH
ALKILASEKIIRLERMGAVVIGLTEKEIGEIYDVRLVMETFVFERLGQANVDELVTDLSK
HHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ILEMMKVSIKYKDADEFSFQDVLFHETIVRSINHSYILMIWNNLKPVMESFILLSMRARL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH
KEKYEDFERILDNHELYIQAIKTKDRDLMLKSLHQNFDDVQGKVEDLWLSQQMLAKGAEQ
HHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
QND
CCC
>Mature Secondary Structure 
SESKGLLYPEKWLSRASTGVRVACELRMRIISGLIESGTILSENKLAAEFSVSRSPIRE
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHCCHHHHHH
ALKILASEKIIRLERMGAVVIGLTEKEIGEIYDVRLVMETFVFERLGQANVDELVTDLSK
HHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ILEMMKVSIKYKDADEFSFQDVLFHETIVRSINHSYILMIWNNLKPVMESFILLSMRARL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH
KEKYEDFERILDNHELYIQAIKTKDRDLMLKSLHQNFDDVQGKVEDLWLSQQMLAKGAEQ
HHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
QND
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8535972 [H]