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The map label for this gene is ywoD [H]

Identifier: 52787752

GI number: 52787752

Start: 3900418

End: 3901779

Strand: Reverse

Name: ywoD [H]

Synonym: BLi04075

Alternate gene names: 52787752

Gene position: 3901779-3900418 (Counterclockwise)

Preceding gene: 52787753

Following gene: 52787750

Centisome position: 92.4

GC content: 49.85

Gene sequence:

>1362_bases
ATGGCCGGATTGAAAAAGAAACGGGCCCTGTTTTTAACAGCCGTTGCATCAGGGACGATGCTGAATCCGCTCAACTCTTC
AATGATTTCTTTGGCGCTGCACAGCATCCAGCATGAGTTTCACCTTTCATTTGCAACCGTATCGTGGCTGATTTCATCTT
TTTATCTAGCCAGTGCGGTCGCACAGCCTGTCACAGGAAAAATTGGCGATTTAATCGGCCGGAAAAAGATGTTTTTGTCA
GGGCTTGTTCTCGTTGCCGTATCGGCAATCGGCGCTCCTCTCGCACCGGCTTTTTCCGTCTTGTTGATCATGCGTTTGTT
TCAATCGATTGGGAGCGGCGCCATTTACCCTTCGGGAGTGGGCCTGATCAGAAGCCACATTCATGAGAAGCAGGCGTCTG
CACTCAGTGTGCTGTCCATTTTTTCTTCGGCAATGACCGCCTTTGGACCGACCGTGGGGGGATTTTTAATCGTACTCGGG
GGATGGCCCGCCATCTTCCTCGTGAACTTTCCATTTATTTTGTTCAGCTTTTTGCTGGGGATGTACATGTTCCCGAAAGA
TGAGAAAAAAGCCGGCTTAAATGTCCGCGCCGTGATCAAGCGGCTTGATCTCACCGGAATTCTTCTGTTTGCGGGCGGAA
TCGTTCTCCTGCTGGCATTTCTGCTCTCATTGAGCACGGGCGAGCCCCGTTTTGCCGAGGGGATGTTCGGACTCGTCTTG
CTTTTGATGTTTGTTTGGTGGGAGCTGAGAGTGAACAGTCCGTTTATTGATATCAGGCTGTTGATCGCACGCAGGACGTT
AACTTCGGTCTATGCTCAATTTATTATGCTGAACATCTTTAACTACTGTTTGTTTTTTGGACTTCCGAGTTATTTTCAGG
ATGAAATGCACCTTTCCGTTCAAACGAGCGGTCTTTTGATGCTGTTCATGTCCGGGACGAGCGTATTGATCTCGCCTTTC
GTCGGGAAATGGATTGACCGTTCAGGAGAAACGCAGCCCGTGTTAATTGGTTCTTGCTTAATGGCAGCGGGCGCTATCCT
GCTCACATTGTTTTTTGTCGATGCACCGATGTTGTGGAAAGGCATCATCCTCTCTTTGCTCGGGGTCAGCTACGGCCTCG
GCAATGTCGCCCTGCAGGCTGCCATGTTTACGGCAAGTCCGCCGGACATCGTCGGGACGACTTCGGGGCTTTTTCAAACA
TGCCGCTATCTTGGCTCGATCTTTTCGTCCGTCATTCTGGGTCTGTTGTTTGGAGAAGAAATAACCGCGGGGCATTTTCA
GGATCTGGGGATGGTCATGATTGCGGTTGCCATCGGCAGCATTTTGATGAGCTTCAGATTTATCAAGCTGATGAAGGATT
GA

Upstream 100 bases:

>100_bases
TGCTTTCGGCTGTGATGATAGGAGCCGTCTGATGAGCGGGGAAGCGGGGGCGGGCGGTAAAGCGGGCGGAGCTGGCGAAA
GGCTGCTGTACCCTAAGTAA

Downstream 100 bases:

>100_bases
AAAATGGAGCGCGAGATGCGGCTCCATTTTTTTGCTTTCTTTTGGAGATTGGAAAAGCAAAGAGACAAAAATTAACAAAT
TGATATTGGTTGCTTATTGA

Product: YwoD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MAGLKKKRALFLTAVASGTMLNPLNSSMISLALHSIQHEFHLSFATVSWLISSFYLASAVAQPVTGKIGDLIGRKKMFLS
GLVLVAVSAIGAPLAPAFSVLLIMRLFQSIGSGAIYPSGVGLIRSHIHEKQASALSVLSIFSSAMTAFGPTVGGFLIVLG
GWPAIFLVNFPFILFSFLLGMYMFPKDEKKAGLNVRAVIKRLDLTGILLFAGGIVLLLAFLLSLSTGEPRFAEGMFGLVL
LLMFVWWELRVNSPFIDIRLLIARRTLTSVYAQFIMLNIFNYCLFFGLPSYFQDEMHLSVQTSGLLMLFMSGTSVLISPF
VGKWIDRSGETQPVLIGSCLMAAGAILLTLFFVDAPMLWKGIILSLLGVSYGLGNVALQAAMFTASPPDIVGTTSGLFQT
CRYLGSIFSSVILGLLFGEEITAGHFQDLGMVMIAVAIGSILMSFRFIKLMKD

Sequences:

>Translated_453_residues
MAGLKKKRALFLTAVASGTMLNPLNSSMISLALHSIQHEFHLSFATVSWLISSFYLASAVAQPVTGKIGDLIGRKKMFLS
GLVLVAVSAIGAPLAPAFSVLLIMRLFQSIGSGAIYPSGVGLIRSHIHEKQASALSVLSIFSSAMTAFGPTVGGFLIVLG
GWPAIFLVNFPFILFSFLLGMYMFPKDEKKAGLNVRAVIKRLDLTGILLFAGGIVLLLAFLLSLSTGEPRFAEGMFGLVL
LLMFVWWELRVNSPFIDIRLLIARRTLTSVYAQFIMLNIFNYCLFFGLPSYFQDEMHLSVQTSGLLMLFMSGTSVLISPF
VGKWIDRSGETQPVLIGSCLMAAGAILLTLFFVDAPMLWKGIILSLLGVSYGLGNVALQAAMFTASPPDIVGTTSGLFQT
CRYLGSIFSSVILGLLFGEEITAGHFQDLGMVMIAVAIGSILMSFRFIKLMKD
>Mature_452_residues
AGLKKKRALFLTAVASGTMLNPLNSSMISLALHSIQHEFHLSFATVSWLISSFYLASAVAQPVTGKIGDLIGRKKMFLSG
LVLVAVSAIGAPLAPAFSVLLIMRLFQSIGSGAIYPSGVGLIRSHIHEKQASALSVLSIFSSAMTAFGPTVGGFLIVLGG
WPAIFLVNFPFILFSFLLGMYMFPKDEKKAGLNVRAVIKRLDLTGILLFAGGIVLLLAFLLSLSTGEPRFAEGMFGLVLL
LMFVWWELRVNSPFIDIRLLIARRTLTSVYAQFIMLNIFNYCLFFGLPSYFQDEMHLSVQTSGLLMLFMSGTSVLISPFV
GKWIDRSGETQPVLIGSCLMAAGAILLTLFFVDAPMLWKGIILSLLGVSYGLGNVALQAAMFTASPPDIVGTTSGLFQTC
RYLGSIFSSVILGLLFGEEITAGHFQDLGMVMIAVAIGSILMSFRFIKLMKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=408, Percent_Identity=23.2843137254902, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788710, Length=325, Percent_Identity=24, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790195, Length=276, Percent_Identity=24.6376811594203, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1789042, Length=320, Percent_Identity=23.4375, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49011; Mature: 48879

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLKKKRALFLTAVASGTMLNPLNSSMISLALHSIQHEFHLSFATVSWLISSFYLASAV
CCCCCHHHHHEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQPVTGKIGDLIGRKKMFLSGLVLVAVSAIGAPLAPAFSVLLIMRLFQSIGSGAIYPSGV
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
GLIRSHIHEKQASALSVLSIFSSAMTAFGPTVGGFLIVLGGWPAIFLVNFPFILFSFLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCHHHHHHHHHHHHHHHHHH
MYMFPKDEKKAGLNVRAVIKRLDLTGILLFAGGIVLLLAFLLSLSTGEPRFAEGMFGLVL
HHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LLMFVWWELRVNSPFIDIRLLIARRTLTSVYAQFIMLNIFNYCLFFGLPSYFQDEMHLSV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHEEEE
QTSGLLMLFMSGTSVLISPFVGKWIDRSGETQPVLIGSCLMAAGAILLTLFFVDAPMLWK
ECCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
GIILSLLGVSYGLGNVALQAAMFTASPPDIVGTTSGLFQTCRYLGSIFSSVILGLLFGEE
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ITAGHFQDLGMVMIAVAIGSILMSFRFIKLMKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGLKKKRALFLTAVASGTMLNPLNSSMISLALHSIQHEFHLSFATVSWLISSFYLASAV
CCCCHHHHHEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]