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The map label for this gene is ydfJ [H]

Identifier: 52787744

GI number: 52787744

Start: 3890568

End: 3892742

Strand: Direct

Name: ydfJ [H]

Synonym: BLi04067

Alternate gene names: 52787744

Gene position: 3890568-3892742 (Clockwise)

Preceding gene: 52787743

Following gene: 52787751

Centisome position: 92.14

GC content: 42.62

Gene sequence:

>2175_bases
ATGTCAAAAATGTTATATAAATTAGGAGGATGGGTTGCTCGCAATCGCATAAAAGTAATATGCGCATGGATCGTTGTGCT
AGTTGCTTCGATAGGCCTTGCAATCACGTTAAAACCAAGTTTTTCTGAGGATATGTCCATACCTGACACACCTTCGGAAA
AAGCGATGGATGTCATTCAAAAAGAATTTCCCCACGGTCCTGATAAAGGGAGCATACGGGTTATTTTCGGTGCTGAAGAT
GGGGAGAAACTGACTTCGAAGTCAGCGGAAAAAGCAATAGAAAATACGTTAAAGGAAATCGATAAAGATGGTTCCGTTGA
CTCGATTGCAAGTCCTTTTGTGACAGGAACAATCGCGAAAGATGGCACAGTTGCCTATGCTGATATCAAGTATAAATCAT
CAGCAGATGATATTAAAGATTACTCTATCAAACACTTAAAAGACAGTTTGAAAATGGCTGATTATGAAGGATTGCAAACT
GAACTAAGCGGAGATGTACCAGGAGCTGAGATGGAGATAGGCGGTATCTCTGAAATTGTCGGCATTATTTTGGCCTTTAT
CGTTTTGGCCATTACGTTTGGCTCTTTATTAATAGCAGGTTTGCCGATTTTAACAGCACTGATTGGATTAGGTGTAAGTA
TTGGGCTTGTTTTGATTGGGACACAAGTATTCGATATCGCTTCCGTCAGTCTATCATTAGCCGGAATGATTGGCCTTGCA
GTTGGAATTGATTATGCTTTATTTATTTTTACGAAGCACCGCCAGTTTTTAGGCGAAGGTATACAAAAAAATGAATCAAT
TGCGAGAGCTACAGGAACAGCCGGGAGTGCAGTCGTTTTTGCCGGACTTACTGTTATCGTAGCACTTTGCGGATTGACTG
TCGTTAACATTCCTTTTATGTCTGCAATGGGGCTGACAGCAGGACTTAGTGTACTGATGGCTGTTCTCGCTTCAATCACG
CTTGTGCCTGCCGTCTTGTCGATAGCGGGGAAACGGATGGTTCCGAAAGCAAACAAGAAAAAAGAAAAACAAAGCGCGGA
AACAAATGTCTGGGGACGCTTTGTCACAAAGAATCCTATCATGCTAAGTGTATGCAGCATTCTGATTTTGCTCGTTATTA
GTATCCCATCTATGCATTTGGAGCTGGGCTTGCCTGATGCAGGGATGAAAGCGAAGGATAACCCGGATCGCCGGGCTTAT
GACTTGCTTGCCGACGGTTTTGGAGAAGGATTTAATGGTCAATTAACAATCGTAGCGGATGCCGCAAGTGTAACAGAAAA
TAAGGCGGAAGCCTTCGCAGATGCAGTGAAAGAAATAAAGGAACTGGACCATGTAGCGAGTGTCACTCCGGCAATGCCTA
ATAAAGAAGGGAACTTTGCCATCATTACAGTAGTTCCTGAAACAGGTCCAAATGATGCAGCAACGAAGGATTTGGTAAAG
GATGTACGCAGCTTATCAGATAAAAACGGAGTAGATTTGCTCGTTACTGGATCAACCGCAGTGAATATTGATATTTCAGA
TCGCCTTAATGATGCGATACCGGTGTTTGCTGTACTCATTGTTGGTTTTGCGTTTGTATTGCTGACAATCGTATTCCGTT
CGTTGCTTGTGCCTCTTGTTGCTGTCGCAGGTTTCATATTGACGATGACAGCCACTCTTGGAATCTGTGTATTTGTTTTA
CAAGACGGGAATCTCATCGACTTTTTCAAAATACCTGAAAAAGGGCCGATACTCGCGTTCCTGCCGATTTTATCCATTGG
GATTCTGTTCGGATTAGCGATGGATTATCAAGTATTCCTTGTAAGCAGAATGCGTGAAGAATATGTAAAAACAAAGAATC
CAGTACAAGCCATTCAGGCTGGATTAAAACACAGCGGTCCTGTTGTCACCGCAGCCGGCCTGATCATGATATTCGTTTTT
GCAGGGTTTATCTTTGCTGGTGAAGCTTCTATTAAAGCCAACGGGTTGGCTCTTTCCTTTGGTGTGCTCTTTGATGCATT
TATTGTACGAATGACACTGATTCCAAGTCTGATGAAGCTGATGGGGAATGCAGCCTGGTATTTGCCAAAATGGCTGGACA
AGATCATTCCGAATGTAGACATAGAAGGGCATCAACTCACGAAGGAAATACAGCCAGAAACAGCTCATGAACAAAAGAAA
CAAATCAGTATGTAA

Upstream 100 bases:

>100_bases
TTTGCCCAAACGTACATGCCCGAATGTACGTTTTTTTTATTTCATTGTCCACTACAATGAGAAAGAATGTGATCAAGCAA
TGTGTTGAAAGGAGATTATC

Downstream 100 bases:

>100_bases
TAGAAAGCAGATCTTTTACGAGATCTGCTTTTTTGCTTCATACGGACGTTTATTTTTTAGAAAAGGTTAATCGCTAATAT
CAGCCATGGAAAAGAATCAT

Product: YdfJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 724; Mature: 723

Protein sequence:

>724_residues
MSKMLYKLGGWVARNRIKVICAWIVVLVASIGLAITLKPSFSEDMSIPDTPSEKAMDVIQKEFPHGPDKGSIRVIFGAED
GEKLTSKSAEKAIENTLKEIDKDGSVDSIASPFVTGTIAKDGTVAYADIKYKSSADDIKDYSIKHLKDSLKMADYEGLQT
ELSGDVPGAEMEIGGISEIVGIILAFIVLAITFGSLLIAGLPILTALIGLGVSIGLVLIGTQVFDIASVSLSLAGMIGLA
VGIDYALFIFTKHRQFLGEGIQKNESIARATGTAGSAVVFAGLTVIVALCGLTVVNIPFMSAMGLTAGLSVLMAVLASIT
LVPAVLSIAGKRMVPKANKKKEKQSAETNVWGRFVTKNPIMLSVCSILILLVISIPSMHLELGLPDAGMKAKDNPDRRAY
DLLADGFGEGFNGQLTIVADAASVTENKAEAFADAVKEIKELDHVASVTPAMPNKEGNFAIITVVPETGPNDAATKDLVK
DVRSLSDKNGVDLLVTGSTAVNIDISDRLNDAIPVFAVLIVGFAFVLLTIVFRSLLVPLVAVAGFILTMTATLGICVFVL
QDGNLIDFFKIPEKGPILAFLPILSIGILFGLAMDYQVFLVSRMREEYVKTKNPVQAIQAGLKHSGPVVTAAGLIMIFVF
AGFIFAGEASIKANGLALSFGVLFDAFIVRMTLIPSLMKLMGNAAWYLPKWLDKIIPNVDIEGHQLTKEIQPETAHEQKK
QISM

Sequences:

>Translated_724_residues
MSKMLYKLGGWVARNRIKVICAWIVVLVASIGLAITLKPSFSEDMSIPDTPSEKAMDVIQKEFPHGPDKGSIRVIFGAED
GEKLTSKSAEKAIENTLKEIDKDGSVDSIASPFVTGTIAKDGTVAYADIKYKSSADDIKDYSIKHLKDSLKMADYEGLQT
ELSGDVPGAEMEIGGISEIVGIILAFIVLAITFGSLLIAGLPILTALIGLGVSIGLVLIGTQVFDIASVSLSLAGMIGLA
VGIDYALFIFTKHRQFLGEGIQKNESIARATGTAGSAVVFAGLTVIVALCGLTVVNIPFMSAMGLTAGLSVLMAVLASIT
LVPAVLSIAGKRMVPKANKKKEKQSAETNVWGRFVTKNPIMLSVCSILILLVISIPSMHLELGLPDAGMKAKDNPDRRAY
DLLADGFGEGFNGQLTIVADAASVTENKAEAFADAVKEIKELDHVASVTPAMPNKEGNFAIITVVPETGPNDAATKDLVK
DVRSLSDKNGVDLLVTGSTAVNIDISDRLNDAIPVFAVLIVGFAFVLLTIVFRSLLVPLVAVAGFILTMTATLGICVFVL
QDGNLIDFFKIPEKGPILAFLPILSIGILFGLAMDYQVFLVSRMREEYVKTKNPVQAIQAGLKHSGPVVTAAGLIMIFVF
AGFIFAGEASIKANGLALSFGVLFDAFIVRMTLIPSLMKLMGNAAWYLPKWLDKIIPNVDIEGHQLTKEIQPETAHEQKK
QISM
>Mature_723_residues
SKMLYKLGGWVARNRIKVICAWIVVLVASIGLAITLKPSFSEDMSIPDTPSEKAMDVIQKEFPHGPDKGSIRVIFGAEDG
EKLTSKSAEKAIENTLKEIDKDGSVDSIASPFVTGTIAKDGTVAYADIKYKSSADDIKDYSIKHLKDSLKMADYEGLQTE
LSGDVPGAEMEIGGISEIVGIILAFIVLAITFGSLLIAGLPILTALIGLGVSIGLVLIGTQVFDIASVSLSLAGMIGLAV
GIDYALFIFTKHRQFLGEGIQKNESIARATGTAGSAVVFAGLTVIVALCGLTVVNIPFMSAMGLTAGLSVLMAVLASITL
VPAVLSIAGKRMVPKANKKKEKQSAETNVWGRFVTKNPIMLSVCSILILLVISIPSMHLELGLPDAGMKAKDNPDRRAYD
LLADGFGEGFNGQLTIVADAASVTENKAEAFADAVKEIKELDHVASVTPAMPNKEGNFAIITVVPETGPNDAATKDLVKD
VRSLSDKNGVDLLVTGSTAVNIDISDRLNDAIPVFAVLIVGFAFVLLTIVFRSLLVPLVAVAGFILTMTATLGICVFVLQ
DGNLIDFFKIPEKGPILAFLPILSIGILFGLAMDYQVFLVSRMREEYVKTKNPVQAIQAGLKHSGPVVTAAGLIMIFVFA
GFIFAGEASIKANGLALSFGVLFDAFIVRMTLIPSLMKLMGNAAWYLPKWLDKIIPNVDIEGHQLTKEIQPETAHEQKKQ
ISM

Specific function: Unknown

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 77129; Mature: 76997

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKMLYKLGGWVARNRIKVICAWIVVLVASIGLAITLKPSFSEDMSIPDTPSEKAMDVIQ
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
KEFPHGPDKGSIRVIFGAEDGEKLTSKSAEKAIENTLKEIDKDGSVDSIASPFVTGTIAK
HHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECC
DGTVAYADIKYKSSADDIKDYSIKHLKDSLKMADYEGLQTELSGDVPGAEMEIGGISEIV
CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEECCCHHHHH
GIILAFIVLAITFGSLLIAGLPILTALIGLGVSIGLVLIGTQVFDIASVSLSLAGMIGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGIDYALFIFTKHRQFLGEGIQKNESIARATGTAGSAVVFAGLTVIVALCGLTVVNIPFM
HHHHHHHHHHHHHHHHHHCCHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SAMGLTAGLSVLMAVLASITLVPAVLSIAGKRMVPKANKKKEKQSAETNVWGRFVTKNPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEEEECCCCH
MLSVCSILILLVISIPSMHLELGLPDAGMKAKDNPDRRAYDLLADGFGEGFNGQLTIVAD
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEC
AASVTENKAEAFADAVKEIKELDHVASVTPAMPNKEGNFAIITVVPETGPNDAATKDLVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
DVRSLSDKNGVDLLVTGSTAVNIDISDRLNDAIPVFAVLIVGFAFVLLTIVFRSLLVPLV
HHHHCCCCCCCEEEEECCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAGFILTMTATLGICVFVLQDGNLIDFFKIPEKGPILAFLPILSIGILFGLAMDYQVFL
HHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
VSRMREEYVKTKNPVQAIQAGLKHSGPVVTAAGLIMIFVFAGFIFAGEASIKANGLALSF
HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEHH
GVLFDAFIVRMTLIPSLMKLMGNAAWYLPKWLDKIIPNVDIEGHQLTKEIQPETAHEQKK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHH
QISM
HCCC
>Mature Secondary Structure 
SKMLYKLGGWVARNRIKVICAWIVVLVASIGLAITLKPSFSEDMSIPDTPSEKAMDVIQ
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
KEFPHGPDKGSIRVIFGAEDGEKLTSKSAEKAIENTLKEIDKDGSVDSIASPFVTGTIAK
HHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECC
DGTVAYADIKYKSSADDIKDYSIKHLKDSLKMADYEGLQTELSGDVPGAEMEIGGISEIV
CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEECCCHHHHH
GIILAFIVLAITFGSLLIAGLPILTALIGLGVSIGLVLIGTQVFDIASVSLSLAGMIGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGIDYALFIFTKHRQFLGEGIQKNESIARATGTAGSAVVFAGLTVIVALCGLTVVNIPFM
HHHHHHHHHHHHHHHHHHCCHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SAMGLTAGLSVLMAVLASITLVPAVLSIAGKRMVPKANKKKEKQSAETNVWGRFVTKNPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEEEECCCCH
MLSVCSILILLVISIPSMHLELGLPDAGMKAKDNPDRRAYDLLADGFGEGFNGQLTIVAD
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEC
AASVTENKAEAFADAVKEIKELDHVASVTPAMPNKEGNFAIITVVPETGPNDAATKDLVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
DVRSLSDKNGVDLLVTGSTAVNIDISDRLNDAIPVFAVLIVGFAFVLLTIVFRSLLVPLV
HHHHCCCCCCCEEEEECCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAGFILTMTATLGICVFVLQDGNLIDFFKIPEKGPILAFLPILSIGILFGLAMDYQVFL
HHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
VSRMREEYVKTKNPVQAIQAGLKHSGPVVTAAGLIMIFVFAGFIFAGEASIKANGLALSF
HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEHH
GVLFDAFIVRMTLIPSLMKLMGNAAWYLPKWLDKIIPNVDIEGHQLTKEIQPETAHEQKK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHH
QISM
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]