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The map label for this gene is rodA [H]

Identifier: 52787701

GI number: 52787701

Start: 3849195

End: 3850364

Strand: Reverse

Name: rodA [H]

Synonym: BLi04024

Alternate gene names: 52787701

Gene position: 3850364-3849195 (Counterclockwise)

Preceding gene: 52787702

Following gene: 52787699

Centisome position: 91.18

GC content: 46.58

Gene sequence:

>1170_bases
ATGGGCCAGAAGAAAAATACGACAAGTCCCTATTATCAGGGCGATTTGATTTTTATATTAGCCATGTTCTTTTTAATCAG
TGTGATCGCTGTTTACGCTGCGGAGCCGTCTTTTTCACCGAAGGGTTATCCGGCAAAGCAATTGTTCTTTTATCTGCTCG
GCATTTCGGTGATCGTCGGCTTTCTCTATTTTGATCTGGAGCAGCTTGAAAAGTTAAGCATTTACATATATTTATTCGGC
ATCTTGTCGTTGCTCGTGTTAAAAGTTAGTCCGGAGTCGATCGCTCCGATTAAAAACGGCGCAAAAAGCTGGTTTCAATT
TGGTACGATCACGCTGCAGCCGTCGGAATTTATGAAAATCGGCCTGATTATGATGCTGGCTTCGGTGATTTCCAAAGCAA
GTCCGAAAGGCTCGCGCTCGATGCAGGAGGATGTTCGCCTGTTGCTGAAAATCGCGGGAGTGTCGGCGGTTCCGGTCGGA
TTGATTTTAATGCAGGACGCCGGTACGGCCGGTATCTGCATGTTCTTTGTCGCCGTTATGGTGTTTTTATCAGGCGTGAA
CTGGAAGCTGATTTTCATAGTCGCGGGATCGGGCATCACGCTCGTACTGCTCGTTCTGTTTTTGGTGATCAATTTTCCGG
AGTTTTCAAAGGATACATTGCATATCCAGCAATATCAGATCAACCGGGTGATGACATGGGTCGATTCGAGCCAGCAGGAC
GCGAATGATACGTATCAGACCGAAAAAGCCGTTACGGCGATCGGCTCAGGAGAAATCTTCGGAACGGGCATTAACAATTT
GAAAGTATACGTTCCTGAAGGCCAAACCGATTTCATCTATGCCGTCATCGGCGAAAGTTTCGGCTTTATCGGCTGTACAT
TTGTCGTCATCATGTTTTTCCTTCTCATTTACCGGCTTGTCGTGCTGATTGATAAGATACACCCGTACAACAAGTTTGCA
TCGTTTTTCTGTGTTGGGTATACGGCGCTGATTGTCATCCACACATTCCAAAATATCGGAATGAACGTCGGGCTGATGCC
GGTTACGGGCGTTCCCCTTCTGTTCATCAGCTACGGAGGGAGCTCTGTATTGTCCGCGCTGATCGGCTATGCGATCGTTT
ATAACGCCAGCTGCCAGCTGACGAAATATAAAGGCTATATGTTTAAATAA

Upstream 100 bases:

>100_bases
ATGCGGGCTGTTATTTTATTCACCCTTTTTCGCAATGTGAACGGTTGTTCATGCTATAATGAAAGTTAGTGCTTTTGATG
AAGAAATAAGGCGGGGTATA

Downstream 100 bases:

>100_bases
AAAAGACAGCCGAATCAGGCTGTCTTTTTAGTCTTGGTTTAAAAATGCTAGAGCCGCCGACACAAGAATTTTCGCCGCGT
TCAGCATGCCTTTTTCATCG

Product: RodA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MGQKKNTTSPYYQGDLIFILAMFFLISVIAVYAAEPSFSPKGYPAKQLFFYLLGISVIVGFLYFDLEQLEKLSIYIYLFG
ILSLLVLKVSPESIAPIKNGAKSWFQFGTITLQPSEFMKIGLIMMLASVISKASPKGSRSMQEDVRLLLKIAGVSAVPVG
LILMQDAGTAGICMFFVAVMVFLSGVNWKLIFIVAGSGITLVLLVLFLVINFPEFSKDTLHIQQYQINRVMTWVDSSQQD
ANDTYQTEKAVTAIGSGEIFGTGINNLKVYVPEGQTDFIYAVIGESFGFIGCTFVVIMFFLLIYRLVVLIDKIHPYNKFA
SFFCVGYTALIVIHTFQNIGMNVGLMPVTGVPLLFISYGGSSVLSALIGYAIVYNASCQLTKYKGYMFK

Sequences:

>Translated_389_residues
MGQKKNTTSPYYQGDLIFILAMFFLISVIAVYAAEPSFSPKGYPAKQLFFYLLGISVIVGFLYFDLEQLEKLSIYIYLFG
ILSLLVLKVSPESIAPIKNGAKSWFQFGTITLQPSEFMKIGLIMMLASVISKASPKGSRSMQEDVRLLLKIAGVSAVPVG
LILMQDAGTAGICMFFVAVMVFLSGVNWKLIFIVAGSGITLVLLVLFLVINFPEFSKDTLHIQQYQINRVMTWVDSSQQD
ANDTYQTEKAVTAIGSGEIFGTGINNLKVYVPEGQTDFIYAVIGESFGFIGCTFVVIMFFLLIYRLVVLIDKIHPYNKFA
SFFCVGYTALIVIHTFQNIGMNVGLMPVTGVPLLFISYGGSSVLSALIGYAIVYNASCQLTKYKGYMFK
>Mature_388_residues
GQKKNTTSPYYQGDLIFILAMFFLISVIAVYAAEPSFSPKGYPAKQLFFYLLGISVIVGFLYFDLEQLEKLSIYIYLFGI
LSLLVLKVSPESIAPIKNGAKSWFQFGTITLQPSEFMKIGLIMMLASVISKASPKGSRSMQEDVRLLLKIAGVSAVPVGL
ILMQDAGTAGICMFFVAVMVFLSGVNWKLIFIVAGSGITLVLLVLFLVINFPEFSKDTLHIQQYQINRVMTWVDSSQQDA
NDTYQTEKAVTAIGSGEIFGTGINNLKVYVPEGQTDFIYAVIGESFGFIGCTFVVIMFFLLIYRLVVLIDKIHPYNKFAS
FFCVGYTALIVIHTFQNIGMNVGLMPVTGVPLLFISYGGSSVLSALIGYAIVYNASCQLTKYKGYMFK

Specific function: This Is A Septum-Peptidoglycan Biosynthetic Protein, Involved In Cell Wall Formation. Plays A Role In The Stabilization Of The Ftsz Ring During Cell Division. [C]

COG id: COG0772

COG function: function code D; Bacterial cell division membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ftsW/rodA/spoVE family [H]

Homologues:

Organism=Escherichia coli, GI1786277, Length=309, Percent_Identity=29.4498381877023, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1786853, Length=315, Percent_Identity=30.1587301587302, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001182
- InterPro:   IPR018365 [H]

Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]

EC number: NA

Molecular weight: Translated: 42988; Mature: 42856

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS00428 FTSW_RODA_SPOVE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQKKNTTSPYYQGDLIFILAMFFLISVIAVYAAEPSFSPKGYPAKQLFFYLLGISVIVG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
FLYFDLEQLEKLSIYIYLFGILSLLVLKVSPESIAPIKNGAKSWFQFGTITLQPSEFMKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEECHHHHHHH
GLIMMLASVISKASPKGSRSMQEDVRLLLKIAGVSAVPVGLILMQDAGTAGICMFFVAVM
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHH
VFLSGVNWKLIFIVAGSGITLVLLVLFLVINFPEFSKDTLHIQQYQINRVMTWVDSSQQD
HHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHCCCCCC
ANDTYQTEKAVTAIGSGEIFGTGINNLKVYVPEGQTDFIYAVIGESFGFIGCTFVVIMFF
CCHHHHHHHHHHEECCCCEEECCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHH
LLIYRLVVLIDKIHPYNKFASFFCVGYTALIVIHTFQNIGMNVGLMPVTGVPLLFISYGG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCC
SSVLSALIGYAIVYNASCQLTKYKGYMFK
HHHHHHHHHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure 
GQKKNTTSPYYQGDLIFILAMFFLISVIAVYAAEPSFSPKGYPAKQLFFYLLGISVIVG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
FLYFDLEQLEKLSIYIYLFGILSLLVLKVSPESIAPIKNGAKSWFQFGTITLQPSEFMKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEECHHHHHHH
GLIMMLASVISKASPKGSRSMQEDVRLLLKIAGVSAVPVGLILMQDAGTAGICMFFVAVM
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHH
VFLSGVNWKLIFIVAGSGITLVLLVLFLVINFPEFSKDTLHIQQYQINRVMTWVDSSQQD
HHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHCCCCCC
ANDTYQTEKAVTAIGSGEIFGTGINNLKVYVPEGQTDFIYAVIGESFGFIGCTFVVIMFF
CCHHHHHHHHHHEECCCCEEECCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHH
LLIYRLVVLIDKIHPYNKFASFFCVGYTALIVIHTFQNIGMNVGLMPVTGVPLLFISYGG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCC
SSVLSALIGYAIVYNASCQLTKYKGYMFK
HHHHHHHHHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]