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The map label for this gene is ywlD [C]

Identifier: 52787617

GI number: 52787617

Start: 3763324

End: 3763884

Strand: Reverse

Name: ywlD [C]

Synonym: BLi03939

Alternate gene names: 52787617

Gene position: 3763884-3763324 (Counterclockwise)

Preceding gene: 52787618

Following gene: 52787616

Centisome position: 89.14

GC content: 50.45

Gene sequence:

>561_bases
ATGAATGTTGATGTGTTAATAGGCGAAATCCTGACGCTTTCGATGATGGCTTTTGCACTCGGCATGGATGCCTTTTCAGT
CGGTCTTGGAATGGGAATGGCCAAGCTGAAAAGGAACCAGGTTTTTCAAATCGGCGTCATTATTGGATTGTTCCATGTCA
TCATGCCGCTTGGCGGAATGATTGCGGGACAGTTTCTTTCGGGTGCGCTTGGTGCGCTGGCGGGATATATTGGGGGAGCT
CTTTTATTGGTGCTGGGCATTCAGATGATTGTCGCATCTTTTAATAAAAGCGGGGAGCAGATCATCTCTCCGCACGGCTT
CGGCTTGTTCGTTTTTGCCGTCGGCGTCAGCCTTGACAGCTTTTCAGTCGGTCTCAGCCTCGGCCTCTACGGAACGAAAC
CGATATTAACGATCTTTCTGTTCGGTTTGTTCAGCATGGTGTTAACTTGGGCGGGCCTTCTGCTTGGAAAAAAGGTTCAA
ACGTGGCTCGGCGCCTACAGCGAAGCGCTCGGAGGAGCCATCTTGCTGAGCTTCGGTCTGAAGCTTTTGCTGCCCATTTA
A

Upstream 100 bases:

>100_bases
CCGGCCACCGCGTAATCGAAGCGTAGCCTAAGCGGGGGTGTTCTATCTGCCTTTGGACGTGCATAAGCTAGAAAAGCTGG
CGTGTCCAAGGGGGAATTGC

Downstream 100 bases:

>100_bases
TTGAAAGATGGGAAAATCTTTTTTCTGTTTTGCATAACATAATGGAACTTAGAAAAAGAGGGGGAGATCCCCTCTTTTTT
GATTTCTGGAGCGGATTTTA

Product: YwlD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MNVDVLIGEILTLSMMAFALGMDAFSVGLGMGMAKLKRNQVFQIGVIIGLFHVIMPLGGMIAGQFLSGALGALAGYIGGA
LLLVLGIQMIVASFNKSGEQIISPHGFGLFVFAVGVSLDSFSVGLSLGLYGTKPILTIFLFGLFSMVLTWAGLLLGKKVQ
TWLGAYSEALGGAILLSFGLKLLLPI

Sequences:

>Translated_186_residues
MNVDVLIGEILTLSMMAFALGMDAFSVGLGMGMAKLKRNQVFQIGVIIGLFHVIMPLGGMIAGQFLSGALGALAGYIGGA
LLLVLGIQMIVASFNKSGEQIISPHGFGLFVFAVGVSLDSFSVGLSLGLYGTKPILTIFLFGLFSMVLTWAGLLLGKKVQ
TWLGAYSEALGGAILLSFGLKLLLPI
>Mature_186_residues
MNVDVLIGEILTLSMMAFALGMDAFSVGLGMGMAKLKRNQVFQIGVIIGLFHVIMPLGGMIAGQFLSGALGALAGYIGGA
LLLVLGIQMIVASFNKSGEQIISPHGFGLFVFAVGVSLDSFSVGLSLGLYGTKPILTIFLFGLFSMVLTWAGLLLGKKVQ
TWLGAYSEALGGAILLSFGLKLLLPI

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0059 family

Homologues:

Organism=Escherichia coli, GI87081981, Length=175, Percent_Identity=30.2857142857143, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3939_BACLD (Q65DW1)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_081016.1
- RefSeq:   YP_093446.1
- STRING:   Q65DW1
- EnsemblBacteria:   EBBACT00000055566
- EnsemblBacteria:   EBBACT00000061173
- GeneID:   3027278
- GeneID:   3101300
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi03939
- KEGG:   bli:BL03987
- NMPDR:   fig|279010.5.peg.4077
- eggNOG:   COG1971
- GeneTree:   EBGT00050000001354
- HOGENOM:   HBG709685
- OMA:   FIGRHAK
- ProtClustDB:   CLSK2518286
- BioCyc:   BLIC279010-1:BLI03939-MONOMER
- BioCyc:   BLIC279010:BL03987-MONOMER
- HAMAP:   MF_01521
- InterPro:   IPR003810
- InterPro:   IPR022929

Pfam domain/function: PF02659 DUF204

EC number: NA

Molecular weight: Translated: 19387; Mature: 19387

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12e21838)-; HASH(0xe8c142c)-; HASH(0x12a2d034)-; HASH(0x12cb2fc4)-; HASH(0x12089054)-; HASH(0x1273cbd8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVDVLIGEILTLSMMAFALGMDAFSVGLGMGMAKLKRNQVFQIGVIIGLFHVIMPLGGM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGQFLSGALGALAGYIGGALLLVLGIQMIVASFNKSGEQIISPHGFGLFVFAVGVSLDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHCCHHH
FSVGLSLGLYGTKPILTIFLFGLFSMVLTWAGLLLGKKVQTWLGAYSEALGGAILLSFGL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLLPI
HHHCCH
>Mature Secondary Structure
MNVDVLIGEILTLSMMAFALGMDAFSVGLGMGMAKLKRNQVFQIGVIIGLFHVIMPLGGM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGQFLSGALGALAGYIGGALLLVLGIQMIVASFNKSGEQIISPHGFGLFVFAVGVSLDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHCCHHH
FSVGLSLGLYGTKPILTIFLFGLFSMVLTWAGLLLGKKVQTWLGAYSEALGGAILLSFGL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLLPI
HHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA