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The map label for this gene is yrdF

Identifier: 52787403

GI number: 52787403

Start: 3547432

End: 3547707

Strand: Direct

Name: yrdF

Synonym: BLi03720

Alternate gene names: NA

Gene position: 3547432-3547707 (Clockwise)

Preceding gene: 52787402

Following gene: 52787410

Centisome position: 84.01

GC content: 45.29

Gene sequence:

>276_bases
ATGAAACAAGTCACTTTAAAAGGAGAAAAGATCAGAAGTGTATCAGATCTTCACAAAGAATTAAAAGAACAGCTGGAGCT
TCCTGACTACTATGGCGAAAATCTTGATGCGCTGTGGGATTGTCTGACCGGCTGGGTCGGCATGCCTTTGCTGATAGAGT
GGAAGAATGTCGAGAAAAGCCGGATTTACTTGGGCGATCAAGCCGAGGCATATTTGCAGCTTTTTCGCGAAGCCGAAGAA
ACACTGGACGGCTTTCAGCTGAAAACAGAAGGATGA

Upstream 100 bases:

>100_bases
TCGGGATTCCGGGGGTCAGACCGGATCGTCTATTCTAACGACAGACTGGTTTATAAAACGACTGACCACTATAAAACGTT
TACGAGAATGAGATGATCAT

Downstream 100 bases:

>100_bases
AACAGAAAACGAGCGGGCGCTTCAGACAGGCGTCCGCTTATATTAATTGATGCAGAAAATCGGTTCTTCAGTCAAAAAAT
GAATGAACGAAAATGGTTTG

Product: YrdF

Products: NA

Alternate protein names: Ribonuclease inhibitor [H]

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKQVTLKGEKIRSVSDLHKELKEQLELPDYYGENLDALWDCLTGWVGMPLLIEWKNVEKSRIYLGDQAEAYLQLFREAEE
TLDGFQLKTEG

Sequences:

>Translated_91_residues
MKQVTLKGEKIRSVSDLHKELKEQLELPDYYGENLDALWDCLTGWVGMPLLIEWKNVEKSRIYLGDQAEAYLQLFREAEE
TLDGFQLKTEG
>Mature_91_residues
MKQVTLKGEKIRSVSDLHKELKEQLELPDYYGENLDALWDCLTGWVGMPLLIEWKNVEKSRIYLGDQAEAYLQLFREAEE
TLDGFQLKTEG

Specific function: Inhibitor of the ribonuclease barnase. Forms a one-to- one non-covalent complex [H]

COG id: COG2732

COG function: function code K; Barstar, RNAse (barnase) inhibitor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the barstar family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000468 [H]

Pfam domain/function: PF01337 Barstar [H]

EC number: NA

Molecular weight: Translated: 10606; Mature: 10606

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVTLKGEKIRSVSDLHKELKEQLELPDYYGENLDALWDCLTGWVGMPLLIEWKNVEKS
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCC
RIYLGDQAEAYLQLFREAEETLDGFQLKTEG
EEEECCHHHHHHHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure
MKQVTLKGEKIRSVSDLHKELKEQLELPDYYGENLDALWDCLTGWVGMPLLIEWKNVEKS
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCC
RIYLGDQAEAYLQLFREAEETLDGFQLKTEG
EEEECCHHHHHHHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3050134; 2696173; 9757110; 8405454; 8043574 [H]