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The map label for this gene is 52787402

Identifier: 52787402

GI number: 52787402

Start: 3546972

End: 3547427

Strand: Direct

Name: 52787402

Synonym: BLi03719

Alternate gene names: NA

Gene position: 3546972-3547427 (Clockwise)

Preceding gene: 52787401

Following gene: 52787403

Centisome position: 84.0

GC content: 47.81

Gene sequence:

>456_bases
GTGAAAAAAATATTATCAACTCTTGCGCTTGGGTTTGTTCTCGCGCTGGGCTTTCTGGCGGGGAACCTTTTTACAAGCTC
AGCTGAAGGGCCGCAGGCAGAAAAAGGCGGCACCGTTCAGTCAAATGAAGTCATCAATACATTTGAAGGTGTTGCCGACT
ATATTGTGAAATACGGCAGGCTGCCTGACAACTTCATCACAAAAGCCGAGGCGTCAAAATTAGGCTGGGATCCGCAAAAA
GGCAATCTGGCAGAAGTAGCGCCTGGAAAAAGCATCGGCGGCGATATCTTTCAAAACAGGGAAAAGCTGCTTCCAGATGC
ATCCGGACGCGTATGGAGAGAAGCCGACATCAACTATACATCGGGATTCCGGGGGTCAGACCGGATCGTCTATTCTAACG
ACAGACTGGTTTATAAAACGACTGACCACTATAAAACGTTTACGAGAATGAGATGA

Upstream 100 bases:

>100_bases
AGACGGAATATGGAAATGAAGAAATGCGGCTGTTCAACCCCATGAAGGCACATTCTTCATGTTTATGTTATAAAGTCTAA
AGACAGGGAGGACTTTATCC

Downstream 100 bases:

>100_bases
TCATATGAAACAAGTCACTTTAAAAGGAGAAAAGATCAGAAGTGTATCAGATCTTCACAAAGAATTAAAAGAACAGCTGG
AGCTTCCTGACTACTATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Binase; RNase Bi [H]

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKKILSTLALGFVLALGFLAGNLFTSSAEGPQAEKGGTVQSNEVINTFEGVADYIVKYGRLPDNFITKAEASKLGWDPQK
GNLAEVAPGKSIGGDIFQNREKLLPDASGRVWREADINYTSGFRGSDRIVYSNDRLVYKTTDHYKTFTRMR

Sequences:

>Translated_151_residues
MKKILSTLALGFVLALGFLAGNLFTSSAEGPQAEKGGTVQSNEVINTFEGVADYIVKYGRLPDNFITKAEASKLGWDPQK
GNLAEVAPGKSIGGDIFQNREKLLPDASGRVWREADINYTSGFRGSDRIVYSNDRLVYKTTDHYKTFTRMR
>Mature_151_residues
MKKILSTLALGFVLALGFLAGNLFTSSAEGPQAEKGGTVQSNEVINTFEGVADYIVKYGRLPDNFITKAEASKLGWDPQK
GNLAEVAPGKSIGGDIFQNREKLLPDASGRVWREADINYTSGFRGSDRIVYSNDRLVYKTTDHYKTFTRMR

Specific function: This is a purine-specific ribonuclease [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonuclease N1/T1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001887
- InterPro:   IPR000026
- InterPro:   IPR016191 [H]

Pfam domain/function: PF00545 Ribonuclease [H]

EC number: NA

Molecular weight: Translated: 16658; Mature: 16658

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILSTLALGFVLALGFLAGNLFTSSAEGPQAEKGGTVQSNEVINTFEGVADYIVKYGR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
LPDNFITKAEASKLGWDPQKGNLAEVAPGKSIGGDIFQNREKLLPDASGRVWREADINYT
CCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCC
SGFRGSDRIVYSNDRLVYKTTDHYKTFTRMR
CCCCCCCCEEECCCEEEEEECHHHHHHHHCC
>Mature Secondary Structure
MKKILSTLALGFVLALGFLAGNLFTSSAEGPQAEKGGTVQSNEVINTFEGVADYIVKYGR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
LPDNFITKAEASKLGWDPQKGNLAEVAPGKSIGGDIFQNREKLLPDASGRVWREADINYT
CCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCC
SGFRGSDRIVYSNDRLVYKTTDHYKTFTRMR
CCCCCCCCEEECCCEEEEEECHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1594455; 2632211; 761620; 9153077; 9708913; 11976484 [H]