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The map label for this gene is yvfW

Identifier: 52787358

GI number: 52787358

Start: 3500281

End: 3501714

Strand: Reverse

Name: yvfW

Synonym: BLi03674

Alternate gene names: 52787358

Gene position: 3501714-3500281 (Counterclockwise)

Preceding gene: 52787359

Following gene: 52787357

Centisome position: 82.93

GC content: 53.63

Gene sequence:

>1434_bases
ATGGCAATGAAGATCGGAACGCAGAAATTTAAAGAGCGCGTGTCAGACGGGCTCGACAACGAGTTTATGAGGGGGGCCGT
TTCAAGCGCGCAGGAGCGCTTGAGAGCGCGCCGTCTTGAGGCGGCAAAAGAGCTCGGGAACTGGGAAGAATGGCGGTCTC
TGGCCGAAGAAATCAGGCAGCACGTGCTGGAAAATCTGGATTACTATCTAGAACAGCTTGCCGAAAATGTCGCCAAAAAA
GGCGGGCACGTTTTCTTTGCGCAGACGGCTGAAGAAGCGACAGGCTACATCCGCGATGTCGTGAAAAAGAAAAACGGCAA
AAAAATCGTCAAATCAAAATCAATGGTGACCGAAGAAATCAACATGAACGAGGCACTTGAAAGCGACGGCTGCGAAGTGG
TCGAAACCGATTTGGGCGAATACATCCTCCAAATCGATGATCATGATCCGCCGTCACATATCGTCGCACCTGCTTTGCAT
AAAAACAAAGAGCAAATCCGCGACGTCTTCAAAGAGCGGATCGGCTACCGCAACACCGAAAAGCCGGAAGAGCTTGTCAT
GCACGCGCGCGCCGTGCTTAGAAAGAAATTTCTCGAAGCTGATATCGGCATTACGGGCTGCAATTTTGCAATTGCCGATA
CGGGATCTGTCAGCCTTGTCACAAACGAGGGAAACGGACGTCTCGTCACGACTATTCCGAAGACGCAGATTACCGTGATG
GGGATGGAGCGGATCGTCCCATCATTCGACGAGTTTGAAGTTCTCGTCGGCATGCTCACAAGAAGCGCGGTCGGACAGCG
GCTGACGAGCTATATCACGGCGCTGACAGGGCCGAGGCTGCCCGGTGAAGCGGACGGCCCGGAGGAGTTTCACCTCGTCA
TCGTTGACAACGGGCGTTCCAACATTCTCGGAACGGAGTTTCAGTCCGTCCTTCAATGCATCCGCTGTGCGGCCTGCATC
AATGTCTGCCCCGTTTACCGTCATGTCGGCGGGCATTCTTACGGTTCGATCTATTCAGGTCCGATCGGGGCTGTATTGTC
GCCGCTGCTCGGCGGATATGACGATTATAAAGAACTGCCGTACGCATCTTCGTTATGTGCGGCTTGCTCTGAAGCATGTC
CGGTGAAAATCCCGCTTCATGAGCTGCTTCTAAAGCACAGGCAGCGCATCGTTGAAAAAGAAGGGCGCGCGCCGATATCC
GAAAAGCTGGCGATGAAAGCGTTCGGCTTGGGAACTTCTGCGCCATCCCTTTACAAAATGGGCTCCAAATGGGCGCCGGC
AGCCATGAAGCCGTTTAAAGAAGACGGCAAGATTACGAAGGGACCGGGTCCGTTAAAACAGTGGACCCAGATACGCGACT
TCCCCGCGCCGAACAAGTCAAGGTTCCGCGACTGGTTTGAGGACAGACGGAAAGAGAAGGGGGAAGACAAATGA

Upstream 100 bases:

>100_bases
AGAAAGAACAAGCCGATTGAAGTCATGCATATCGCAGAAGTGCTGAACAGCAGATAAACAGACAATCCGGTCATTTCACA
GATAGAGGGGGACATTCGTT

Downstream 100 bases:

>100_bases
CAAACGGAACAATCCACAACAAAGACGGCTTTTTAAACCGGATTGCTGAAAGGCTCGGCCGCAACAGGCGTTCTGCAGGC
GTCACCGTTCCCGATTATAT

Product: YvfW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MAMKIGTQKFKERVSDGLDNEFMRGAVSSAQERLRARRLEAAKELGNWEEWRSLAEEIRQHVLENLDYYLEQLAENVAKK
GGHVFFAQTAEEATGYIRDVVKKKNGKKIVKSKSMVTEEINMNEALESDGCEVVETDLGEYILQIDDHDPPSHIVAPALH
KNKEQIRDVFKERIGYRNTEKPEELVMHARAVLRKKFLEADIGITGCNFAIADTGSVSLVTNEGNGRLVTTIPKTQITVM
GMERIVPSFDEFEVLVGMLTRSAVGQRLTSYITALTGPRLPGEADGPEEFHLVIVDNGRSNILGTEFQSVLQCIRCAACI
NVCPVYRHVGGHSYGSIYSGPIGAVLSPLLGGYDDYKELPYASSLCAACSEACPVKIPLHELLLKHRQRIVEKEGRAPIS
EKLAMKAFGLGTSAPSLYKMGSKWAPAAMKPFKEDGKITKGPGPLKQWTQIRDFPAPNKSRFRDWFEDRRKEKGEDK

Sequences:

>Translated_477_residues
MAMKIGTQKFKERVSDGLDNEFMRGAVSSAQERLRARRLEAAKELGNWEEWRSLAEEIRQHVLENLDYYLEQLAENVAKK
GGHVFFAQTAEEATGYIRDVVKKKNGKKIVKSKSMVTEEINMNEALESDGCEVVETDLGEYILQIDDHDPPSHIVAPALH
KNKEQIRDVFKERIGYRNTEKPEELVMHARAVLRKKFLEADIGITGCNFAIADTGSVSLVTNEGNGRLVTTIPKTQITVM
GMERIVPSFDEFEVLVGMLTRSAVGQRLTSYITALTGPRLPGEADGPEEFHLVIVDNGRSNILGTEFQSVLQCIRCAACI
NVCPVYRHVGGHSYGSIYSGPIGAVLSPLLGGYDDYKELPYASSLCAACSEACPVKIPLHELLLKHRQRIVEKEGRAPIS
EKLAMKAFGLGTSAPSLYKMGSKWAPAAMKPFKEDGKITKGPGPLKQWTQIRDFPAPNKSRFRDWFEDRRKEKGEDK
>Mature_476_residues
AMKIGTQKFKERVSDGLDNEFMRGAVSSAQERLRARRLEAAKELGNWEEWRSLAEEIRQHVLENLDYYLEQLAENVAKKG
GHVFFAQTAEEATGYIRDVVKKKNGKKIVKSKSMVTEEINMNEALESDGCEVVETDLGEYILQIDDHDPPSHIVAPALHK
NKEQIRDVFKERIGYRNTEKPEELVMHARAVLRKKFLEADIGITGCNFAIADTGSVSLVTNEGNGRLVTTIPKTQITVMG
MERIVPSFDEFEVLVGMLTRSAVGQRLTSYITALTGPRLPGEADGPEEFHLVIVDNGRSNILGTEFQSVLQCIRCAACIN
VCPVYRHVGGHSYGSIYSGPIGAVLSPLLGGYDDYKELPYASSLCAACSEACPVKIPLHELLLKHRQRIVEKEGRAPISE
KLAMKAFGLGTSAPSLYKMGSKWAPAAMKPFKEDGKITKGPGPLKQWTQIRDFPAPNKSRFRDWFEDRRKEKGEDK

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains

Homologues:

Organism=Escherichia coli, GI1786498, Length=476, Percent_Identity=55.0420168067227, Blast_Score=560, Evalue=1e-161,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LUTB_BACLD (Q65EM0)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_080761.1
- RefSeq:   YP_093187.1
- ProteinModelPortal:   Q65EM0
- STRING:   Q65EM0
- EnsemblBacteria:   EBBACT00000054963
- EnsemblBacteria:   EBBACT00000059541
- GeneID:   3029355
- GeneID:   3100665
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi03674
- KEGG:   bli:BL03457
- NMPDR:   fig|279010.5.peg.2324
- eggNOG:   COG1139
- GeneTree:   EBGT00050000001532
- HOGENOM:   HBG297510
- OMA:   MAIADKG
- ProtClustDB:   CLSK2484791
- BioCyc:   BLIC279010-1:BLI03674-MONOMER
- BioCyc:   BLIC279010:BL03457-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_02103
- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825
- Gene3D:   G3DSA:3.40.50.10420
- Gene3D:   G3DSA:1.10.1060.10
- TIGRFAMs:   TIGR00273

Pfam domain/function: PF02589 DUF162; SSF46548 Helical_ferredxn

EC number: NA

Molecular weight: Translated: 53215; Mature: 53083

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2; PS00783 RIBOSOMAL_L13

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMKIGTQKFKERVSDGLDNEFMRGAVSSAQERLRARRLEAAKELGNWEEWRSLAEEIRQ
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
HVLENLDYYLEQLAENVAKKGGHVFFAQTAEEATGYIRDVVKKKNGKKIVKSKSMVTEEI
HHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
NMNEALESDGCEVVETDLGEYILQIDDHDPPSHIVAPALHKNKEQIRDVFKERIGYRNTE
CHHHHHCCCCCHHHHHHHHHHEEEECCCCCCCHHCCHHHHCCHHHHHHHHHHHHCCCCCC
KPEELVMHARAVLRKKFLEADIGITGCNFAIADTGSVSLVTNEGNGRLVTTIPKTQITVM
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCEEEEECCCCEEEEE
GMERIVPSFDEFEVLVGMLTRSAVGQRLTSYITALTGPRLPGEADGPEEFHLVIVDNGRS
EHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
NILGTEFQSVLQCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAVLSPLLGGYDDYKELP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCC
YASSLCAACSEACPVKIPLHELLLKHRQRIVEKEGRAPISEKLAMKAFGLGTSAPSLYKM
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHC
GSKWAPAAMKPFKEDGKITKGPGPLKQWTQIRDFPAPNKSRFRDWFEDRRKEKGEDK
CCCCCCHHHCCHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AMKIGTQKFKERVSDGLDNEFMRGAVSSAQERLRARRLEAAKELGNWEEWRSLAEEIRQ
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
HVLENLDYYLEQLAENVAKKGGHVFFAQTAEEATGYIRDVVKKKNGKKIVKSKSMVTEEI
HHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
NMNEALESDGCEVVETDLGEYILQIDDHDPPSHIVAPALHKNKEQIRDVFKERIGYRNTE
CHHHHHCCCCCHHHHHHHHHHEEEECCCCCCCHHCCHHHHCCHHHHHHHHHHHHCCCCCC
KPEELVMHARAVLRKKFLEADIGITGCNFAIADTGSVSLVTNEGNGRLVTTIPKTQITVM
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCEEEEECCCCEEEEE
GMERIVPSFDEFEVLVGMLTRSAVGQRLTSYITALTGPRLPGEADGPEEFHLVIVDNGRS
EHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
NILGTEFQSVLQCIRCAACINVCPVYRHVGGHSYGSIYSGPIGAVLSPLLGGYDDYKELP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCC
YASSLCAACSEACPVKIPLHELLLKHRQRIVEKEGRAPISEKLAMKAFGLGTSAPSLYKM
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHC
GSKWAPAAMKPFKEDGKITKGPGPLKQWTQIRDFPAPNKSRFRDWFEDRRKEKGEDK
CCCCCCHHHCCHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA