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The map label for this gene is opuCC [H]

Identifier: 52787334

GI number: 52787334

Start: 3476240

End: 3477157

Strand: Reverse

Name: opuCC [H]

Synonym: BLi03649

Alternate gene names: 52787334

Gene position: 3477157-3476240 (Counterclockwise)

Preceding gene: 52787335

Following gene: 52787333

Centisome position: 82.35

GC content: 47.6

Gene sequence:

>918_bases
ATGCAAACAAAAAAACTGAGACGGCTCGGCGCCGTCATGCTGGTCCTCTCGCTTTTGATCAGCGGCTGTGCGCTGCCGGG
CCTTGGCGGGGCTTCCGATAAAACGATCAAAATCGGAGCGCAAAACCTGACCGAATCCGAAATTCTTGCCAATATGATCT
CGCTTTTGATCGAGCATGATACGGATCTCAATACGGTGCTGGTCAAAAACCTCGGCTCAAACTATGTGCAGCACCAGGCC
ATGCTCGGCGGAGACATCGACATTTCTGCGACGCGCTATTCGGGAACTGACCTGACAAGCACGCTTGGAAGGGAAGCGGA
GAAAGACCCGAAAAAAGCGCTCCGCATCGTACAGCAGGACTTTCAAAAGAAATTCAACTACAAATGGTTCGATTCTTACG
GATTTGACAATACGTACGCTTTTACAGTCACGAAAGAACTCGCTGAAAAAGGGAACTATGAAACCATATCCGATCTGAAA
AAAGACGCGGATCAACTGAAGCTTGGCGTTGACAATGCATGGCTGAAACGAAAAGGCGACGGATATCCGGGATTTAAACA
GGAATACGGGTTTTCATTTGGCTCGACCTTTCCAATGCAGATCGGACTCGTTTATGACGCCGTCAAAAACGGCAAAATGG
ATATCGTTCTTGCCTATTCAACAGACGGCAGGATCAAAGCCTATGATTTAAAGCTGTTAAAAGACGATAAACGCTTTTTC
CCGCCGTATGACTGTTCGCCGGTCGTGCCGGAAAAAGTGCTGAAGGAGCATCCGGAGCTTGAAGAGACCATCAATAAACT
GATTGGAAAAATCGACACCGAAACGATGCAGGAGCTCAATTACGAAGTCGATGGAAAGCTGAAAGAGCCTTCTGTCGTCG
CGGCCGAGTTTTTAAAGAAGCACAATTATTTTGAGTAA

Upstream 100 bases:

>100_bases
CTGGCCATCGTGATCGACTATATTCTGTCGAAAACCGAAGACAAAGTCACGCCTCAAGGATTAAAAGGGATGAAGGAAGT
ATCATAAGGAGTTGGCTCTT

Downstream 100 bases:

>100_bases
AAGGAGGGGATGACAAATGGAAGTGCTGCAGCAGCTTTGGACGTATTACGCGCAAAACGGCGGCTATGTGCTGGGGGAAT
TTTACCGCCACTTTTTAATG

Product: periplasmic transport protein OpuCC

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MQTKKLRRLGAVMLVLSLLISGCALPGLGGASDKTIKIGAQNLTESEILANMISLLIEHDTDLNTVLVKNLGSNYVQHQA
MLGGDIDISATRYSGTDLTSTLGREAEKDPKKALRIVQQDFQKKFNYKWFDSYGFDNTYAFTVTKELAEKGNYETISDLK
KDADQLKLGVDNAWLKRKGDGYPGFKQEYGFSFGSTFPMQIGLVYDAVKNGKMDIVLAYSTDGRIKAYDLKLLKDDKRFF
PPYDCSPVVPEKVLKEHPELEETINKLIGKIDTETMQELNYEVDGKLKEPSVVAAEFLKKHNYFE

Sequences:

>Translated_305_residues
MQTKKLRRLGAVMLVLSLLISGCALPGLGGASDKTIKIGAQNLTESEILANMISLLIEHDTDLNTVLVKNLGSNYVQHQA
MLGGDIDISATRYSGTDLTSTLGREAEKDPKKALRIVQQDFQKKFNYKWFDSYGFDNTYAFTVTKELAEKGNYETISDLK
KDADQLKLGVDNAWLKRKGDGYPGFKQEYGFSFGSTFPMQIGLVYDAVKNGKMDIVLAYSTDGRIKAYDLKLLKDDKRFF
PPYDCSPVVPEKVLKEHPELEETINKLIGKIDTETMQELNYEVDGKLKEPSVVAAEFLKKHNYFE
>Mature_305_residues
MQTKKLRRLGAVMLVLSLLISGCALPGLGGASDKTIKIGAQNLTESEILANMISLLIEHDTDLNTVLVKNLGSNYVQHQA
MLGGDIDISATRYSGTDLTSTLGREAEKDPKKALRIVQQDFQKKFNYKWFDSYGFDNTYAFTVTKELAEKGNYETISDLK
KDADQLKLGVDNAWLKRKGDGYPGFKQEYGFSFGSTFPMQIGLVYDAVKNGKMDIVLAYSTDGRIKAYDLKLLKDDKRFF
PPYDCSPVVPEKVLKEHPELEETINKLIGKIDTETMQELNYEVDGKLKEPSVVAAEFLKKHNYFE

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=303, Percent_Identity=26.4026402640264, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34268; Mature: 34268

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTKKLRRLGAVMLVLSLLISGCALPGLGGASDKTIKIGAQNLTESEILANMISLLIEHD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC
TDLNTVLVKNLGSNYVQHQAMLGGDIDISATRYSGTDLTSTLGREAEKDPKKALRIVQQD
CCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHH
FQKKFNYKWFDSYGFDNTYAFTVTKELAEKGNYETISDLKKDADQLKLGVDNAWLKRKGD
HHHHCCCEEEECCCCCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHHEECCCHHHHHCCCC
GYPGFKQEYGFSFGSTFPMQIGLVYDAVKNGKMDIVLAYSTDGRIKAYDLKLLKDDKRFF
CCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEECCCCCC
PPYDCSPVVPEKVLKEHPELEETINKLIGKIDTETMQELNYEVDGKLKEPSVVAAEFLKK
CCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH
HNYFE
CCCCC
>Mature Secondary Structure
MQTKKLRRLGAVMLVLSLLISGCALPGLGGASDKTIKIGAQNLTESEILANMISLLIEHD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC
TDLNTVLVKNLGSNYVQHQAMLGGDIDISATRYSGTDLTSTLGREAEKDPKKALRIVQQD
CCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHH
FQKKFNYKWFDSYGFDNTYAFTVTKELAEKGNYETISDLKKDADQLKLGVDNAWLKRKGD
HHHHCCCEEEECCCCCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHHEECCCHHHHHCCCC
GYPGFKQEYGFSFGSTFPMQIGLVYDAVKNGKMDIVLAYSTDGRIKAYDLKLLKDDKRFF
CCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEECCCCCC
PPYDCSPVVPEKVLKEHPELEETINKLIGKIDTETMQELNYEVDGKLKEPSVVAAEFLKK
CCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH
HNYFE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]