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The map label for this gene is yvgS [H]

Identifier: 52787223

GI number: 52787223

Start: 3374284

End: 3376614

Strand: Reverse

Name: yvgS [H]

Synonym: BLi03533

Alternate gene names: 52787223

Gene position: 3376614-3374284 (Counterclockwise)

Preceding gene: 52787224

Following gene: 52787220

Centisome position: 79.96

GC content: 46.72

Gene sequence:

>2331_bases
GTGCAGGAAAACGGTCAGGAATGGCTGGAAGAGGAAAAACGAATCCGGCTTGTTTTAAAGGAATTGGATCAAAAGCTTCA
TTCTCTAAAGGGAAAAACCGGCGGATTGAAGGAGGATATCATCGATTTACGGAAACATTTTTGGAGCGATGTCACCGTAA
ACATAGCCGATGAAAATGAAGCGGTTGAAACATTTTTTAGCATTAAACAGCAGGCTGAGGTTTTGGCTGAGAGGGAAAGG
AGCCATAAGCAGTTTTACAGCCAGCTGAAAAACCTGTTAAAAGTGAAAGAATCGCCTTATTTCGGCCGCGTAGATTTTTT
GGAGGACGGCGAAGAAAACGCTGAGTCCGTCTACATCGGACTCGCCTCTTTAATGTATGAAAAAGAAGAGCGGTTTTTGA
TCTATGATTGGAGAGCGCCGATTTCCAGTCTGTTCTATAACTATGGACCCGGCGCGGCTCAATACGAAGTTCCGGACGAG
ACGGTCAGGGGAACGATTGAGCTGAAAAGGCAATTTCTCTTCAAAAACGGACAGCTGAAAGCGATGTTTAATACGGATAT
GGCGATTGGGGATGAAGTCCTTCAGGAAGTGCTGGGGCAGCAGGCCGATATCCAGATGAAAAGCATCGTCGCGACGATTC
AAAAAGAACAGAATCAGATCATTCGGAACGAAAAGAGCCGCTTTTTAATTGTTCGGGGAGCGGCTGGCAGCGGAAAAACG
TCGGCGGCATTGCAGCGGGCCGCATATTTGCTGTACCGCGGCCGCGGGCAGATCGAGTCGAGCCAGATGCTGCTATTCTC
TCCAAACCTGCTTTTTAACAGCTATGTCGCCAATGTTCTGCCTGAGCTCGGAGAGGAAAACATCCAGCAGACGACGTTCC
AGGAATTTGTAGCGCGCCGCCTTGGAAAGCAGGTACCATGCGAGACTCCGTTCGATCAGCTTGAATATTGTTTAACCGCT
TCAGACGGTGAGGAGCAGCGCATCCGGATGAAATCGATTGAATTGAAATCCAGTCTGGCTTTCAAAGGCATCATCGATGA
TTACGTCAAATATTTGGCAAAAGGGCACCTGGTGTTTAAACATATCACCTTTCGCGGAAAAAGGATCATCACAAGCGGTC
AGATGCGGAAATTTTTCGCGGCCCTTGATCATTCAGACACGCTGTCCAACCGGATTGAACAAACGGGAAAATGGCTGTTG
CAGCTCCTGAATAAATATGAACGCCAGGAAAGAAAAAAAGACTGGGTCATCGAAGAAAGCGAGCTGCTGGATAAAGAGGA
ATACTTAAAGGCTTATAAACGTCTTCAGGAGGAACAGCGCTTTACGGAGAATACGTTTGACGATTATGAAAGGGAGCGAA
ACCTCCTTGCCTCCATCGTTGCCGAAAGGGAGTTCAAGCCGCTCAAGCAAGTGGTAAAAGCGTTCGGCTTTATTGATTTT
AAAGGAACATACCTTCAGCTTTTTTCCGGACGCTATACCCCGCAAACGCGCCCTGATGACTGGCAGAGCATTTGCACATT
CACTCAGAAAAGCTTTCGTTTTGAGAAGCTGCTTTATGAAGATGCCGTCCCTTTTTTATATATGAAAAACAAGCTGAAAG
GCGGGGGGAAAAACACGGCAATCCGCCATTTATTCATTGATGAAGCCCAGGATTACACGCCTTTTCAACTTGCTTTTTTG
GAGAGCTTGTTTCCCGCGTGCAGCATCACGATGCTGGGAGACTTAAACCAGGCGATTCTTGCCCATGCCTATCACGATAA
GACGCTTCTGTCGGGAGGCGTGTTTGAAGGCGAAAAAACGGAGATCATCACCTTGAAGCGCAGCTACAGGTCGACGAAAG
AAATTGTTGAATTGACAAAGCGCATCATCGAAGGGGGCGAAGAGATCGAAGCTTTTAATAGGAACGGCAAAAAACCGACT
TTGACAATATCAGCCGATCCTCATGCACACCATAAAGAGATGGCTTCCCTTATGACCGCCCTTCAAAAAGAAGGACTTGA
GACGATTGCAGTCATCTGTAAAACAGTCCGGGAATGCAGGGATGCGTTCCAGCATCTTCAGCAGCATGCAGAGCTTAAAC
TGATCGATAAAGAAACGAGAACGTTTCAAAAAGGCGTGGTCGTCATTCCCGTCTATTTGGCGAAAGGGATCGAATTTGAT
GCCGTCATCATTTATGACGCTTCTGAAAAGCAATACAAAAAGGAAAGAGAGCGGACTTTATTTTATACGGCGTGCACGAG
GGCGATGCATGAGCTGCACCTCTTTTCCATTGGAAAAGAAACGCATTTTTTAAACGGCGTCCCAAATGATATGTACACGA
GAAGAGAGTGA

Upstream 100 bases:

>100_bases
AAGTGTATTTTAACATAAAATTTCAATAATTATAATTTTATCCATTTTTATTTTATCATGAATCTTTTTCGATGTCAAAT
CTTTTTAGGGAGTGGTCAGC

Downstream 100 bases:

>100_bases
CGCCGTCACTCTCTTCTTCCATCATATATATCAGTTCTGACGTCCAGCACATTGTTGTTGATGGACACATGGTATTTGTC
CTGCCATTCGATTTTGGCAT

Product: YvgS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 776; Mature: 776

Protein sequence:

>776_residues
MQENGQEWLEEEKRIRLVLKELDQKLHSLKGKTGGLKEDIIDLRKHFWSDVTVNIADENEAVETFFSIKQQAEVLAERER
SHKQFYSQLKNLLKVKESPYFGRVDFLEDGEENAESVYIGLASLMYEKEERFLIYDWRAPISSLFYNYGPGAAQYEVPDE
TVRGTIELKRQFLFKNGQLKAMFNTDMAIGDEVLQEVLGQQADIQMKSIVATIQKEQNQIIRNEKSRFLIVRGAAGSGKT
SAALQRAAYLLYRGRGQIESSQMLLFSPNLLFNSYVANVLPELGEENIQQTTFQEFVARRLGKQVPCETPFDQLEYCLTA
SDGEEQRIRMKSIELKSSLAFKGIIDDYVKYLAKGHLVFKHITFRGKRIITSGQMRKFFAALDHSDTLSNRIEQTGKWLL
QLLNKYERQERKKDWVIEESELLDKEEYLKAYKRLQEEQRFTENTFDDYERERNLLASIVAEREFKPLKQVVKAFGFIDF
KGTYLQLFSGRYTPQTRPDDWQSICTFTQKSFRFEKLLYEDAVPFLYMKNKLKGGGKNTAIRHLFIDEAQDYTPFQLAFL
ESLFPACSITMLGDLNQAILAHAYHDKTLLSGGVFEGEKTEIITLKRSYRSTKEIVELTKRIIEGGEEIEAFNRNGKKPT
LTISADPHAHHKEMASLMTALQKEGLETIAVICKTVRECRDAFQHLQQHAELKLIDKETRTFQKGVVVIPVYLAKGIEFD
AVIIYDASEKQYKKERERTLFYTACTRAMHELHLFSIGKETHFLNGVPNDMYTRRE

Sequences:

>Translated_776_residues
MQENGQEWLEEEKRIRLVLKELDQKLHSLKGKTGGLKEDIIDLRKHFWSDVTVNIADENEAVETFFSIKQQAEVLAERER
SHKQFYSQLKNLLKVKESPYFGRVDFLEDGEENAESVYIGLASLMYEKEERFLIYDWRAPISSLFYNYGPGAAQYEVPDE
TVRGTIELKRQFLFKNGQLKAMFNTDMAIGDEVLQEVLGQQADIQMKSIVATIQKEQNQIIRNEKSRFLIVRGAAGSGKT
SAALQRAAYLLYRGRGQIESSQMLLFSPNLLFNSYVANVLPELGEENIQQTTFQEFVARRLGKQVPCETPFDQLEYCLTA
SDGEEQRIRMKSIELKSSLAFKGIIDDYVKYLAKGHLVFKHITFRGKRIITSGQMRKFFAALDHSDTLSNRIEQTGKWLL
QLLNKYERQERKKDWVIEESELLDKEEYLKAYKRLQEEQRFTENTFDDYERERNLLASIVAEREFKPLKQVVKAFGFIDF
KGTYLQLFSGRYTPQTRPDDWQSICTFTQKSFRFEKLLYEDAVPFLYMKNKLKGGGKNTAIRHLFIDEAQDYTPFQLAFL
ESLFPACSITMLGDLNQAILAHAYHDKTLLSGGVFEGEKTEIITLKRSYRSTKEIVELTKRIIEGGEEIEAFNRNGKKPT
LTISADPHAHHKEMASLMTALQKEGLETIAVICKTVRECRDAFQHLQQHAELKLIDKETRTFQKGVVVIPVYLAKGIEFD
AVIIYDASEKQYKKERERTLFYTACTRAMHELHLFSIGKETHFLNGVPNDMYTRRE
>Mature_776_residues
MQENGQEWLEEEKRIRLVLKELDQKLHSLKGKTGGLKEDIIDLRKHFWSDVTVNIADENEAVETFFSIKQQAEVLAERER
SHKQFYSQLKNLLKVKESPYFGRVDFLEDGEENAESVYIGLASLMYEKEERFLIYDWRAPISSLFYNYGPGAAQYEVPDE
TVRGTIELKRQFLFKNGQLKAMFNTDMAIGDEVLQEVLGQQADIQMKSIVATIQKEQNQIIRNEKSRFLIVRGAAGSGKT
SAALQRAAYLLYRGRGQIESSQMLLFSPNLLFNSYVANVLPELGEENIQQTTFQEFVARRLGKQVPCETPFDQLEYCLTA
SDGEEQRIRMKSIELKSSLAFKGIIDDYVKYLAKGHLVFKHITFRGKRIITSGQMRKFFAALDHSDTLSNRIEQTGKWLL
QLLNKYERQERKKDWVIEESELLDKEEYLKAYKRLQEEQRFTENTFDDYERERNLLASIVAEREFKPLKQVVKAFGFIDF
KGTYLQLFSGRYTPQTRPDDWQSICTFTQKSFRFEKLLYEDAVPFLYMKNKLKGGGKNTAIRHLFIDEAQDYTPFQLAFL
ESLFPACSITMLGDLNQAILAHAYHDKTLLSGGVFEGEKTEIITLKRSYRSTKEIVELTKRIIEGGEEIEAFNRNGKKPT
LTISADPHAHHKEMASLMTALQKEGLETIAVICKTVRECRDAFQHLQQHAELKLIDKETRTFQKGVVVIPVYLAKGIEFD
AVIIYDASEKQYKKERERTLFYTACTRAMHELHLFSIGKETHFLNGVPNDMYTRRE

Specific function: Catalyzes the unwinding of duplex DNA in the 3' to 5' direction; this reaction is dependent on the hydrolysis of ATP [H]

COG id: COG3973

COG function: function code R; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 uvrD-like helicase ATP-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000212
- InterPro:   IPR014016 [H]

Pfam domain/function: PF00580 UvrD-helicase [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 89986; Mature: 89986

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQENGQEWLEEEKRIRLVLKELDQKLHSLKGKTGGLKEDIIDLRKHFWSDVTVNIADENE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCHH
AVETFFSIKQQAEVLAERERSHKQFYSQLKNLLKVKESPYFGRVDFLEDGEENAESVYIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
LASLMYEKEERFLIYDWRAPISSLFYNYGPGAAQYEVPDETVRGTIELKRQFLFKNGQLK
HHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
AMFNTDMAIGDEVLQEVLGQQADIQMKSIVATIQKEQNQIIRNEKSRFLIVRGAAGSGKT
EEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
SAALQRAAYLLYRGRGQIESSQMLLFSPNLLFNSYVANVLPELGEENIQQTTFQEFVARR
HHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LGKQVPCETPFDQLEYCLTASDGEEQRIRMKSIELKSSLAFKGIIDDYVKYLAKGHLVFK
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
HITFRGKRIITSGQMRKFFAALDHSDTLSNRIEQTGKWLLQLLNKYERQERKKDWVIEES
EEHHCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ELLDKEEYLKAYKRLQEEQRFTENTFDDYERERNLLASIVAEREFKPLKQVVKAFGFIDF
HHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KGTYLQLFSGRYTPQTRPDDWQSICTFTQKSFRFEKLLYEDAVPFLYMKNKLKGGGKNTA
CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
IRHLFIDEAQDYTPFQLAFLESLFPACSITMLGDLNQAILAHAYHDKTLLSGGVFEGEKT
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHCCCCCCCCCC
EIITLKRSYRSTKEIVELTKRIIEGGEEIEAFNRNGKKPTLTISADPHAHHKEMASLMTA
EEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH
LQKEGLETIAVICKTVRECRDAFQHLQQHAELKLIDKETRTFQKGVVVIPVYLAKGIEFD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCEEEEEHHHHCCCCCC
AVIIYDASEKQYKKERERTLFYTACTRAMHELHLFSIGKETHFLNGVPNDMYTRRE
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQENGQEWLEEEKRIRLVLKELDQKLHSLKGKTGGLKEDIIDLRKHFWSDVTVNIADENE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCHH
AVETFFSIKQQAEVLAERERSHKQFYSQLKNLLKVKESPYFGRVDFLEDGEENAESVYIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
LASLMYEKEERFLIYDWRAPISSLFYNYGPGAAQYEVPDETVRGTIELKRQFLFKNGQLK
HHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
AMFNTDMAIGDEVLQEVLGQQADIQMKSIVATIQKEQNQIIRNEKSRFLIVRGAAGSGKT
EEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
SAALQRAAYLLYRGRGQIESSQMLLFSPNLLFNSYVANVLPELGEENIQQTTFQEFVARR
HHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LGKQVPCETPFDQLEYCLTASDGEEQRIRMKSIELKSSLAFKGIIDDYVKYLAKGHLVFK
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
HITFRGKRIITSGQMRKFFAALDHSDTLSNRIEQTGKWLLQLLNKYERQERKKDWVIEES
EEHHCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ELLDKEEYLKAYKRLQEEQRFTENTFDDYERERNLLASIVAEREFKPLKQVVKAFGFIDF
HHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KGTYLQLFSGRYTPQTRPDDWQSICTFTQKSFRFEKLLYEDAVPFLYMKNKLKGGGKNTA
CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
IRHLFIDEAQDYTPFQLAFLESLFPACSITMLGDLNQAILAHAYHDKTLLSGGVFEGEKT
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHCCCCCCCCCC
EIITLKRSYRSTKEIVELTKRIIEGGEEIEAFNRNGKKPTLTISADPHAHHKEMASLMTA
EEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH
LQKEGLETIAVICKTVRECRDAFQHLQQHAELKLIDKETRTFQKGVVVIPVYLAKGIEFD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCEEEEEHHHHCCCCCC
AVIIYDASEKQYKKERERTLFYTACTRAMHELHLFSIGKETHFLNGVPNDMYTRRE
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]