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The map label for this gene is yvsH [H]

Identifier: 52787213

GI number: 52787213

Start: 3364249

End: 3365652

Strand: Reverse

Name: yvsH [H]

Synonym: BLi03522

Alternate gene names: 52787213

Gene position: 3365652-3364249 (Counterclockwise)

Preceding gene: 52787215

Following gene: 52787212

Centisome position: 79.7

GC content: 49.64

Gene sequence:

>1404_bases
ATGGAACAGACAAAAAAATGGGGCTTCTGGCTTCTTACGGCTTTTGTTGTCGGCAATATGGTCGGCTCAGGGATTTTTAT
GCTCCCCAGCACACTCGCCCAGACGGCTAGCCCGCTCGGCGTAACGGCGGCATGGCTGGTGACGGGTGCGGGGGTGCTGA
TGATCGCCCTTGTATTCGGCCATTTATCCATTCGCCGCCCGGATCTCAAAGCAGGTCCGCAAAGCTATGCAAGAGCTTTA
TTCTCAGACCCTAAAAAAGGGAATGCGGCAGGTTTTACAATGGTATGGGGGTATTGGGTGGCTAGCTGGATCAGCAACGT
GGCCATCATTACAAGCCTTGCAGGCTATTTGACGACTTTCTTGCCGATCTTAACCGACGGACGCGAGCTGGTTGAATTCG
GCGGACACCCCGTTACACTTGGCCAGCTCTTGACATTCATCGTGTGTACGATTTTGTTATGGGGGACGCATTTTATCCTA
GTCTCCAGCATAAATGGAGCGGGCAAGCTGAACTTTTTGGCGACTTTTTCCAAAGTGCTTGGGTTTGTCCTGTTTATTGT
TGCAGGTTTGTTCGTTTTTCAAACGGCATTATTCGAATCATTTTATTTTCCAATCGAATCAGAAGGCAAAAGCATAGGGC
TGGGCGGACAGGTTCACAATGCGGCGATTTCAACGCTGTGGGCGTTTGTCGGCATCGAGTCTGCGGTAATCTTATCAGGG
CGCGCATCATCCCAGCGTGATGTCAAACGCGCGACCATTACCGGCCTGTTAATTGCGCTCGGCATTTATATGATCATCAC
TTTAATTACGATGGGCGTCATCCCGCACGATCAGCTCCAGGCATCAGATAAACCGTTCGTTGATGTGCTGCACGTGATTA
TCGGCAGCTTCGGCAGCGTGATTATGGCGGTCTTGGCAATCGTTTCTTTGTTCGGATCGATGCTCGGCTGGATTTTAATC
GGCGCAGAGGTTCCGTATCAGGCGGCAAAAGCCGGTGATTTTCCTGCTTTCTTTGCGAAAACGAATAAAAAGGGAAGTCC
GGTCAATTCATTGATCGTCACAAACGTGATGTCGCAGATCTTTATTTTCTCAACGATTTCGGGAACGATCAGCGAAGCCT
TTACGTTTTTAACAACGTCGGCGACGCTCGCTTACCTTGTCCCTTATCTCATAGCGGCTCTTTTCAGCTTGAAGCTCATC
CTCAAAGGGGAGACATACGGCGAGCTGAAAGGTTCAAGAACAGGAGACGGCATCATTGCCTTGGCCGCTCTTGCGTACTC
TTTATGGGTCATCGTTTCAGGCACGTCTGACTTGACCACCTTTATCTTGGGAATCGGGCTGTTTTTCGTCGGTCTTGCGA
TCTACCCGTTCGTCTACAAAAAGTTCAAAAATAATCAAGTGTGA

Upstream 100 bases:

>100_bases
TTAACCAAAGCATGGACTTTTGTTCATGCTTTTTTTATTTTGAATGATCTCACGGTCTGGTCCGGCATATTTTTTATAAA
ATGCTCGGAGGTTATATCTT

Downstream 100 bases:

>100_bases
TAAAGCTCTTTGCCAGCCGGGTCTTTTAGCGGAAGATCGGCTGGCTTTTTGATTCCTGCCGAAAATTTTGATTAAAATTT
TTGCTTAGGCCTGTTATACT

Product: YvsH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MEQTKKWGFWLLTAFVVGNMVGSGIFMLPSTLAQTASPLGVTAAWLVTGAGVLMIALVFGHLSIRRPDLKAGPQSYARAL
FSDPKKGNAAGFTMVWGYWVASWISNVAIITSLAGYLTTFLPILTDGRELVEFGGHPVTLGQLLTFIVCTILLWGTHFIL
VSSINGAGKLNFLATFSKVLGFVLFIVAGLFVFQTALFESFYFPIESEGKSIGLGGQVHNAAISTLWAFVGIESAVILSG
RASSQRDVKRATITGLLIALGIYMIITLITMGVIPHDQLQASDKPFVDVLHVIIGSFGSVIMAVLAIVSLFGSMLGWILI
GAEVPYQAAKAGDFPAFFAKTNKKGSPVNSLIVTNVMSQIFIFSTISGTISEAFTFLTTSATLAYLVPYLIAALFSLKLI
LKGETYGELKGSRTGDGIIALAALAYSLWVIVSGTSDLTTFILGIGLFFVGLAIYPFVYKKFKNNQV

Sequences:

>Translated_467_residues
MEQTKKWGFWLLTAFVVGNMVGSGIFMLPSTLAQTASPLGVTAAWLVTGAGVLMIALVFGHLSIRRPDLKAGPQSYARAL
FSDPKKGNAAGFTMVWGYWVASWISNVAIITSLAGYLTTFLPILTDGRELVEFGGHPVTLGQLLTFIVCTILLWGTHFIL
VSSINGAGKLNFLATFSKVLGFVLFIVAGLFVFQTALFESFYFPIESEGKSIGLGGQVHNAAISTLWAFVGIESAVILSG
RASSQRDVKRATITGLLIALGIYMIITLITMGVIPHDQLQASDKPFVDVLHVIIGSFGSVIMAVLAIVSLFGSMLGWILI
GAEVPYQAAKAGDFPAFFAKTNKKGSPVNSLIVTNVMSQIFIFSTISGTISEAFTFLTTSATLAYLVPYLIAALFSLKLI
LKGETYGELKGSRTGDGIIALAALAYSLWVIVSGTSDLTTFILGIGLFFVGLAIYPFVYKKFKNNQV
>Mature_467_residues
MEQTKKWGFWLLTAFVVGNMVGSGIFMLPSTLAQTASPLGVTAAWLVTGAGVLMIALVFGHLSIRRPDLKAGPQSYARAL
FSDPKKGNAAGFTMVWGYWVASWISNVAIITSLAGYLTTFLPILTDGRELVEFGGHPVTLGQLLTFIVCTILLWGTHFIL
VSSINGAGKLNFLATFSKVLGFVLFIVAGLFVFQTALFESFYFPIESEGKSIGLGGQVHNAAISTLWAFVGIESAVILSG
RASSQRDVKRATITGLLIALGIYMIITLITMGVIPHDQLQASDKPFVDVLHVIIGSFGSVIMAVLAIVSLFGSMLGWILI
GAEVPYQAAKAGDFPAFFAKTNKKGSPVNSLIVTNVMSQIFIFSTISGTISEAFTFLTTSATLAYLVPYLIAALFSLKLI
LKGETYGELKGSRTGDGIIALAALAYSLWVIVSGTSDLTTFILGIGLFFVGLAIYPFVYKKFKNNQV

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=465, Percent_Identity=33.3333333333333, Blast_Score=225, Evalue=5e-60,
Organism=Escherichia coli, GI2367353, Length=468, Percent_Identity=30.7692307692308, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI1790575, Length=397, Percent_Identity=26.9521410579345, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1786908, Length=476, Percent_Identity=27.5210084033613, Blast_Score=119, Evalue=6e-28,
Organism=Escherichia coli, GI87082250, Length=368, Percent_Identity=25.8152173913043, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71982612, Length=367, Percent_Identity=23.433242506812, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982608, Length=365, Percent_Identity=23.5616438356164, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71995382, Length=362, Percent_Identity=24.3093922651934, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71995388, Length=362, Percent_Identity=24.3093922651934, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50002; Mature: 50002

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTKKWGFWLLTAFVVGNMVGSGIFMLPSTLAQTASPLGVTAAWLVTGAGVLMIALVFG
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
HLSIRRPDLKAGPQSYARALFSDPKKGNAAGFTMVWGYWVASWISNVAIITSLAGYLTTF
HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPILTDGRELVEFGGHPVTLGQLLTFIVCTILLWGTHFILVSSINGAGKLNFLATFSKVL
HHHHHCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHH
GFVLFIVAGLFVFQTALFESFYFPIESEGKSIGLGGQVHNAAISTLWAFVGIESAVILSG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHEEECC
RASSQRDVKRATITGLLIALGIYMIITLITMGVIPHDQLQASDKPFVDVLHVIIGSFGSV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHH
IMAVLAIVSLFGSMLGWILIGAEVPYQAAKAGDFPAFFAKTNKKGSPVNSLIVTNVMSQI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH
FIFSTISGTISEAFTFLTTSATLAYLVPYLIAALFSLKLILKGETYGELKGSRTGDGIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHH
LAALAYSLWVIVSGTSDLTTFILGIGLFFVGLAIYPFVYKKFKNNQV
HHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEQTKKWGFWLLTAFVVGNMVGSGIFMLPSTLAQTASPLGVTAAWLVTGAGVLMIALVFG
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
HLSIRRPDLKAGPQSYARALFSDPKKGNAAGFTMVWGYWVASWISNVAIITSLAGYLTTF
HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPILTDGRELVEFGGHPVTLGQLLTFIVCTILLWGTHFILVSSINGAGKLNFLATFSKVL
HHHHHCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHH
GFVLFIVAGLFVFQTALFESFYFPIESEGKSIGLGGQVHNAAISTLWAFVGIESAVILSG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHEEECC
RASSQRDVKRATITGLLIALGIYMIITLITMGVIPHDQLQASDKPFVDVLHVIIGSFGSV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHH
IMAVLAIVSLFGSMLGWILIGAEVPYQAAKAGDFPAFFAKTNKKGSPVNSLIVTNVMSQI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH
FIFSTISGTISEAFTFLTTSATLAYLVPYLIAALFSLKLILKGETYGELKGSRTGDGIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHH
LAALAYSLWVIVSGTSDLTTFILGIGLFFVGLAIYPFVYKKFKNNQV
HHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]