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The map label for this gene is yvrH [H]

Identifier: 52787209

GI number: 52787209

Start: 3360233

End: 3360961

Strand: Reverse

Name: yvrH [H]

Synonym: BLi03518

Alternate gene names: 52787209

Gene position: 3360961-3360233 (Counterclockwise)

Preceding gene: 52787210

Following gene: 52787208

Centisome position: 79.59

GC content: 46.5

Gene sequence:

>729_bases
TTGGAAAATGCGACAATTTTGATTGTGGACGACGAAGACGCCATTGTTCAAATGGTCAAGCGCGTCCTCACGAAGGAAGG
ATTTTCAGAAGTTCTGACCGCAAGCAGCGCAGAAGAAGCGCTCGACATCGTGAAAAAGGACACCGTGCACTTAATACTTC
TCGATGTCATGATGCCGGGACAGACAGGATTTGATGTATCTCCTGAAATCAGGCGGCACACCAACGCTCCGATCTTCTTC
TTGACGGCGAAAACATCCGATCTCGATAAACTGTCGGGTTTTGCCTACGGGGCTGATGATTATATTACAAAACCTTTTAA
TCCTCTGGAATTAATCGCCAGGATTAAAGCCCATTTAAAAAGAACGTATATACATAAAGAAGTTGCAGCTGCTTCAGTAT
CTTCAGCCTACGAATATGAACGCTTTATATTTCATCCCGACTTTGCGGAGCTGATCGTGGACGGCGAAACGGTCAGCTGC
TCGGCGCAGCTGCTCCAGCTCCTGCAATATTTTTGCGATCATCCGAACAGGGTGCTTTCCAAGGATCAAATTTATGAAAA
AGTGTGGGGCGTTCCATCTTATGGAGACAGCAACACCGTCATGGTACATATCAGAAAGCTGAGGGAGAAAATCGAAAAAG
ACCCGAGCAGCCCCGAATATATTGTCACGATTCGCGGCCTTGGATATAAGTTCGTTCCCAATCCTGCACGAAAAGAGAGC
GAAGGATGA

Upstream 100 bases:

>100_bases
TTTTTACTTTAAAATCAGAAAATGTGTGCCGATATAGATATAATAGATGGTAAGATGAGGATATAAAATACATGATATAG
ACAGAAAGGAAAGAAGGATT

Downstream 100 bases:

>100_bases
AGCTCAGAGGAAAGCTCGTTCTCCACTTTGTCAGTCAGATTTTTTTGATTCTCGGTCTTGTTCTCGCGACCTTGCTGTTA
TCCTTCATTTTTTTCGCTCT

Product: YvrH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MENATILIVDDEDAIVQMVKRVLTKEGFSEVLTASSAEEALDIVKKDTVHLILLDVMMPGQTGFDVSPEIRRHTNAPIFF
LTAKTSDLDKLSGFAYGADDYITKPFNPLELIARIKAHLKRTYIHKEVAAASVSSAYEYERFIFHPDFAELIVDGETVSC
SAQLLQLLQYFCDHPNRVLSKDQIYEKVWGVPSYGDSNTVMVHIRKLREKIEKDPSSPEYIVTIRGLGYKFVPNPARKES
EG

Sequences:

>Translated_242_residues
MENATILIVDDEDAIVQMVKRVLTKEGFSEVLTASSAEEALDIVKKDTVHLILLDVMMPGQTGFDVSPEIRRHTNAPIFF
LTAKTSDLDKLSGFAYGADDYITKPFNPLELIARIKAHLKRTYIHKEVAAASVSSAYEYERFIFHPDFAELIVDGETVSC
SAQLLQLLQYFCDHPNRVLSKDQIYEKVWGVPSYGDSNTVMVHIRKLREKIEKDPSSPEYIVTIRGLGYKFVPNPARKES
EG
>Mature_242_residues
MENATILIVDDEDAIVQMVKRVLTKEGFSEVLTASSAEEALDIVKKDTVHLILLDVMMPGQTGFDVSPEIRRHTNAPIFF
LTAKTSDLDKLSGFAYGADDYITKPFNPLELIARIKAHLKRTYIHKEVAAASVSSAYEYERFIFHPDFAELIVDGETVSC
SAQLLQLLQYFCDHPNRVLSKDQIYEKVWGVPSYGDSNTVMVHIRKLREKIEKDPSSPEYIVTIRGLGYKFVPNPARKES
EG

Specific function: Member of the two-component regulatory system YvrG/YvrH that positively regulates 7 transcriptional units (wprA, wapA- yxxG, dltABCDE, sunA, sunT-bdbA-yolJ-bdbB, sigO-rsoA, and sigX- rsiX), and negatively regulates the lytABC operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=34.1880341880342, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=36.5217391304348, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=32.9059829059829, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1788394, Length=232, Percent_Identity=30.1724137931034, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=32.8947368421053, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=30.3964757709251, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1786784, Length=231, Percent_Identity=30.3030303030303, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1786911, Length=241, Percent_Identity=28.2157676348548, Blast_Score=107, Evalue=5e-25,
Organism=Escherichia coli, GI1790860, Length=232, Percent_Identity=29.3103448275862, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=28.8888888888889, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1789402, Length=229, Percent_Identity=30.1310043668122, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1790552, Length=232, Percent_Identity=28.8793103448276, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=24.6808510638298, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=26.8722466960352, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790299, Length=118, Percent_Identity=32.2033898305085, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788550, Length=160, Percent_Identity=26.875, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27301; Mature: 27301

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENATILIVDDEDAIVQMVKRVLTKEGFSEVLTASSAEEALDIVKKDTVHLILLDVMMPG
CCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCHHEEEEEEEECCC
QTGFDVSPEIRRHTNAPIFFLTAKTSDLDKLSGFAYGADDYITKPFNPLELIARIKAHLK
CCCCCCCHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RTYIHKEVAAASVSSAYEYERFIFHPDFAELIVDGETVSCSAQLLQLLQYFCDHPNRVLS
HHHHHHHHHHHHHHHHHHHHHEEECCCHHHHEECCCCCCHHHHHHHHHHHHHCCCHHHHH
KDQIYEKVWGVPSYGDSNTVMVHIRKLREKIEKDPSSPEYIVTIRGLGYKFVPNPARKES
HHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCCC
EG
CC
>Mature Secondary Structure
MENATILIVDDEDAIVQMVKRVLTKEGFSEVLTASSAEEALDIVKKDTVHLILLDVMMPG
CCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCHHEEEEEEEECCC
QTGFDVSPEIRRHTNAPIFFLTAKTSDLDKLSGFAYGADDYITKPFNPLELIARIKAHLK
CCCCCCCHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RTYIHKEVAAASVSSAYEYERFIFHPDFAELIVDGETVSCSAQLLQLLQYFCDHPNRVLS
HHHHHHHHHHHHHHHHHHHHHEEECCCHHHHEECCCCCCHHHHHHHHHHHHHCCCHHHHH
KDQIYEKVWGVPSYGDSNTVMVHIRKLREKIEKDPSSPEYIVTIRGLGYKFVPNPARKES
HHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCCC
EG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]