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The map label for this gene is yvrB [H]

Identifier: 52787196

GI number: 52787196

Start: 3344263

End: 3345327

Strand: Reverse

Name: yvrB [H]

Synonym: BLi03505

Alternate gene names: 52787196

Gene position: 3345327-3344263 (Counterclockwise)

Preceding gene: 52787197

Following gene: 52787195

Centisome position: 79.22

GC content: 51.27

Gene sequence:

>1065_bases
TTGCTGAACATATTTACCCTGACGTTTTTAAGAAATAACCGTTTTGCGGCATATGCCTTCAGCCTGCTGTTTTTGTCGGC
ATCCGTTCTTATGGGAATCTCTATCGGATCTTTGGAGATTCCCATTCCTTCTATTATGAAGGTTTTTTTGGAAGAATGGT
TTGGCATTCAAGGGTTAAATCCCGATCCGACAGAGGCGAACATCATCATGAAAATCAGGCTCCCGAGGGTGGTTTTGGCC
GCTCTTGTCGGCGCGGGTCTGGCTGCCGCGGGAGCCGGGTTTCAGGGGCTCTTGAAAAACCCGCTCGCGGATCCATATAC
GCTTGGCATTTCGTCTGGCGCGGCCGTCGGTGCCGTGGTCACGCTGTTTTTTGGGATTCAGCTGCCGGTGATCGGAAGTT
TTACACTGCCGTTTTTAAGCGTTGCTGCGGCTGTTATCGTGATTTTTTTGGTTTTGTTTTTTGCGCGGCTCGTACACCCT
TCGTTGACCCTGTCCGCTTTGATTTTAACAGGGATCATCTTCAGTTCGTTTTTGGGTGCGCTTATTTCTCTCATGATCGC
TTTGACCGGCGATGATTTAAAACCGATCGTCCACTGGCTGCTCGGGAGCGTATCGATGAGGGGCTGGGGCTATGTCGCGT
TGTTTCTGCCCTTTTTTGCTGCGGGCGCTGCCGCGCTTTTGATCAGCGGGAGGGAACTGAATGTGATGACTTATGGCGAG
GAAAAAGCGAGGCTGCTCGGCGTGAATGTGAAGCGGAGTAAATATATCGTTCTGTTGGCGGGAGCTATTTTAACCGGCAG
TGCGGTTGCTGTGTCTGGAACCATTGGTTTTGTCGGCCTCGTCATTCCGCATTTTATCCGGCTTCTGTCGATTACGGATC
ACCGTCATCTTCTGCCGCTCTCGATGCTGAACGGCGCTTCGTTCCTCGTGCTGTCAGATCTTTTGTCGAGAACCATTATC
GAGCCGTCCGAGCTGCCGATCGGCATTATTACCGCATTGATAGGGGCACCTGTTTTCGGCTTTATATTAATTCGGCGCTA
CCGGGGAGGGCGAGTTCATGATTGA

Upstream 100 bases:

>100_bases
TGGAGCGGTGTCAAAGCCGTCAAAAATAATGAAGTATACGACGTGGACCCTGACCTCGTGACCCGTCCGGGGCCGCGATT
GATCAAAGGGGTCGAAGAGC

Downstream 100 bases:

>100_bases
TGTCATCCGGGTGTCCGGCGGATATGGAAAAACGGATGTCTTACAGGATATCAGTTTTGCTGTAAAGCCGGGTGAATTTT
TAGGAATTCTTGGTCCGAAC

Product: YvrB

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MLNIFTLTFLRNNRFAAYAFSLLFLSASVLMGISIGSLEIPIPSIMKVFLEEWFGIQGLNPDPTEANIIMKIRLPRVVLA
ALVGAGLAAAGAGFQGLLKNPLADPYTLGISSGAAVGAVVTLFFGIQLPVIGSFTLPFLSVAAAVIVIFLVLFFARLVHP
SLTLSALILTGIIFSSFLGALISLMIALTGDDLKPIVHWLLGSVSMRGWGYVALFLPFFAAGAAALLISGRELNVMTYGE
EKARLLGVNVKRSKYIVLLAGAILTGSAVAVSGTIGFVGLVIPHFIRLLSITDHRHLLPLSMLNGASFLVLSDLLSRTII
EPSELPIGIITALIGAPVFGFILIRRYRGGRVHD

Sequences:

>Translated_354_residues
MLNIFTLTFLRNNRFAAYAFSLLFLSASVLMGISIGSLEIPIPSIMKVFLEEWFGIQGLNPDPTEANIIMKIRLPRVVLA
ALVGAGLAAAGAGFQGLLKNPLADPYTLGISSGAAVGAVVTLFFGIQLPVIGSFTLPFLSVAAAVIVIFLVLFFARLVHP
SLTLSALILTGIIFSSFLGALISLMIALTGDDLKPIVHWLLGSVSMRGWGYVALFLPFFAAGAAALLISGRELNVMTYGE
EKARLLGVNVKRSKYIVLLAGAILTGSAVAVSGTIGFVGLVIPHFIRLLSITDHRHLLPLSMLNGASFLVLSDLLSRTII
EPSELPIGIITALIGAPVFGFILIRRYRGGRVHD
>Mature_354_residues
MLNIFTLTFLRNNRFAAYAFSLLFLSASVLMGISIGSLEIPIPSIMKVFLEEWFGIQGLNPDPTEANIIMKIRLPRVVLA
ALVGAGLAAAGAGFQGLLKNPLADPYTLGISSGAAVGAVVTLFFGIQLPVIGSFTLPFLSVAAAVIVIFLVLFFARLVHP
SLTLSALILTGIIFSSFLGALISLMIALTGDDLKPIVHWLLGSVSMRGWGYVALFLPFFAAGAAALLISGRELNVMTYGE
EKARLLGVNVKRSKYIVLLAGAILTGSAVAVSGTIGFVGLVIPHFIRLLSITDHRHLLPLSMLNGASFLVLSDLLSRTII
EPSELPIGIITALIGAPVFGFILIRRYRGGRVHD

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=332, Percent_Identity=34.0361445783133, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1788004, Length=300, Percent_Identity=37.3333333333333, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1790741, Length=291, Percent_Identity=34.7079037800687, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1786805, Length=321, Percent_Identity=34.5794392523364, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1786347, Length=282, Percent_Identity=34.0425531914894, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786804, Length=292, Percent_Identity=31.5068493150685, Blast_Score=85, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 37668; Mature: 37668

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIFTLTFLRNNRFAAYAFSLLFLSASVLMGISIGSLEIPIPSIMKVFLEEWFGIQGLN
CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDPTEANIIMKIRLPRVVLAALVGAGLAAAGAGFQGLLKNPLADPYTLGISSGAAVGAVV
CCCCCCEEEEEEEHHHHHHHHHHHCCHHHCCCCHHHHHCCCCCCCEEECCCCCHHHHHHH
TLFFGIQLPVIGSFTLPFLSVAAAVIVIFLVLFFARLVHPSLTLSALILTGIIFSSFLGA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LISLMIALTGDDLKPIVHWLLGSVSMRGWGYVALFLPFFAAGAAALLISGRELNVMTYGE
HHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCCEEEEEEECC
EKARLLGVNVKRSKYIVLLAGAILTGSAVAVSGTIGFVGLVIPHFIRLLSITDHRHLLPL
CCCEEEECEECCCEEEEEEECHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCH
SMLNGASFLVLSDLLSRTIIEPSELPIGIITALIGAPVFGFILIRRYRGGRVHD
HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLNIFTLTFLRNNRFAAYAFSLLFLSASVLMGISIGSLEIPIPSIMKVFLEEWFGIQGLN
CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDPTEANIIMKIRLPRVVLAALVGAGLAAAGAGFQGLLKNPLADPYTLGISSGAAVGAVV
CCCCCCEEEEEEEHHHHHHHHHHHCCHHHCCCCHHHHHCCCCCCCEEECCCCCHHHHHHH
TLFFGIQLPVIGSFTLPFLSVAAAVIVIFLVLFFARLVHPSLTLSALILTGIIFSSFLGA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LISLMIALTGDDLKPIVHWLLGSVSMRGWGYVALFLPFFAAGAAALLISGRELNVMTYGE
HHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCCEEEEEEECC
EKARLLGVNVKRSKYIVLLAGAILTGSAVAVSGTIGFVGLVIPHFIRLLSITDHRHLLPL
CCCEEEECEECCCEEEEEEECHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCH
SMLNGASFLVLSDLLSRTIIEPSELPIGIITALIGAPVFGFILIRRYRGGRVHD
HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]