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The map label for this gene is yusJ [H]

Identifier: 52787155

GI number: 52787155

Start: 3305221

End: 3307005

Strand: Reverse

Name: yusJ [H]

Synonym: BLi03464

Alternate gene names: 52787155

Gene position: 3307005-3305221 (Counterclockwise)

Preceding gene: 52787156

Following gene: 52787154

Centisome position: 78.32

GC content: 47.9

Gene sequence:

>1785_bases
ATGGAACAAACAAAAGATCATATGAAAAAAGGCGGCGCCTTTCTGATCGAAGAGGTAACGGCTGATCAGATGTTCACACC
GGAAGATTTCACAGATGAACATAAAATGATCGCCAAAACGACTGAGGATTATATTCTCGGAGATGTGCTACCGTACATCG
ACGAAATTGAAGAGCACAATTTCGATCATTCTGTCAGGCTTCTGAAAAAAGCCGGCGAACTCGGGCTTCTCGGAGCTGAC
GTTCCTGAGGAGTATGGCGGACTCGGACTTGATAAAATCAGCTCGGCGTTAATCACCGAAAAATTTTCAAGAGCGGGGAG
CTTTTCGTTATCGTACGGGGCGCACGTAGGGATCGGCACGCTTCCGATCGTATTTTTCGGAACCGAGGAGCAAAAGAAAA
AGTATCTGCCGTCCCTTGCAACGGGGGAAAAGTTTGCAGCCTATGCTTTAACAGAGCCGGGCTCCGGGTCTGATGCATTA
GGGGCAAAAACAACGGCCGTTTTGAATGAGGCGGGAACCCACTATATATTAAACGGCGAAAAGCAATGGATTACAAACTC
AGCCTTTGCTGATATTTTCATCGTCTATGCGAAAATAGACGGCGAACATTTCTCGGCCTTCATTGTGGAAAAAGACTACT
CAGGCGTCTCCACAGGGCCTGAAGAGAAAAAAATGGGCATCAAAGGCTCTTCGACCCGCACGCTCATCTTAGACCAGGTT
CAAGTTCCAAAAGAAAACCTATTAGGTGAACCGGGAAAAGGGCATGTCATCGCCTTCAATATTTTAAATATCGGACGCTA
TAAGCTCGCTGTCGGGACAATCGGCGCTTCGAAACGGGTCATCGAGCTGTCCGCTTCATACGCCAATCAGCGCCAGCAGT
TTAAGACACCGATTTCAAAGTTCAGCTTAATTGGGGAAAAAATCGCCAACATGTCAGTCAAACTTTATGCGATGGAAAGC
TCTGTTTATCGTACGGTCGGGCTGTTTGAAGACAAAATGGGCACCTTGAGCGAAGAAGAGCAAAAAGACGGGCGCCAGGT
TGCGAAATCGATCGCAGAATATGCAATCGAATGCTCCCTTAACAAAGTATTCGGATCTGAAACGCTTGATTATATCGTTG
ATGAAGGCGTTCAAATCCACGGCGGTTACGGATTCATGCAGGAATACGAAGTGGAGCGGGCTTACCGCGATTCACGGATT
AACCGGATTTTTGAAGGCACAAACGAAATCAACCGGCTCATCGTCCCGGGCACCTACATGAAAAAAGCGATGAAAGGCGA
GCTTCCTCTGTTTGAGAAAGCAAAGGCTCTTCAGGAAGAACTGATGATGCTCATGCCTGAAGAACCAGGTGACGGCGTTC
TCGAACAGGAAAAGTATCTGCTGAGAAACGCCAAAAAGACCGCGCTCATGATCGCGGGACTCGCCGCGCAAAAATACGGA
AAAGCGCTCGACCAGGAGCAGGAAATCCTCGTCAACATCGCCGACATTGTCAGCCAGATCTACGCAATGGAAGCAGCTAT
TTTACGTACTGAAAAAGCCATCCGGGCAACCGGCGAAGACAAAAACGCACAGAAAATTCTTTATACGCAAATTTTTGCGC
AGGAAGCCTTTCAGGAAATTGAAAGCCATGCCAAAGAATCGCTCATTGCGATGGAATCAGGCGATTCGCTGCGCATGATG
CTGTCCGCGCTGCGCAAATTGACGCGCTTTACGCCTGTCAACGTGATTGAGAAAAAGCGCCAGGCAGCCAAGGGAGTCTT
TGAAGCTGAGAAATATATCGTTTAA

Upstream 100 bases:

>100_bases
CGGAGAAGCGAGCAATTCGGCATTGTGACGATGTGTATCGGCGGAGGCATGGGAGCAGCAGGGGTATTCGAATTAGTTTA
ATCACAAGGGGGATGGAACA

Downstream 100 bases:

>100_bases
ACGAGAAGCCCTGCTTTAATGCAGGGCTTTCTGAGCTGTTAATAGAACCCGAGCACTGTTTTAGGTTTTTCATTCGATCT
ATGTTAAAATTACCTCGATT

Product: YusJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 594

Protein sequence:

>594_residues
MEQTKDHMKKGGAFLIEEVTADQMFTPEDFTDEHKMIAKTTEDYILGDVLPYIDEIEEHNFDHSVRLLKKAGELGLLGAD
VPEEYGGLGLDKISSALITEKFSRAGSFSLSYGAHVGIGTLPIVFFGTEEQKKKYLPSLATGEKFAAYALTEPGSGSDAL
GAKTTAVLNEAGTHYILNGEKQWITNSAFADIFIVYAKIDGEHFSAFIVEKDYSGVSTGPEEKKMGIKGSSTRTLILDQV
QVPKENLLGEPGKGHVIAFNILNIGRYKLAVGTIGASKRVIELSASYANQRQQFKTPISKFSLIGEKIANMSVKLYAMES
SVYRTVGLFEDKMGTLSEEEQKDGRQVAKSIAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAYRDSRI
NRIFEGTNEINRLIVPGTYMKKAMKGELPLFEKAKALQEELMMLMPEEPGDGVLEQEKYLLRNAKKTALMIAGLAAQKYG
KALDQEQEILVNIADIVSQIYAMEAAILRTEKAIRATGEDKNAQKILYTQIFAQEAFQEIESHAKESLIAMESGDSLRMM
LSALRKLTRFTPVNVIEKKRQAAKGVFEAEKYIV

Sequences:

>Translated_594_residues
MEQTKDHMKKGGAFLIEEVTADQMFTPEDFTDEHKMIAKTTEDYILGDVLPYIDEIEEHNFDHSVRLLKKAGELGLLGAD
VPEEYGGLGLDKISSALITEKFSRAGSFSLSYGAHVGIGTLPIVFFGTEEQKKKYLPSLATGEKFAAYALTEPGSGSDAL
GAKTTAVLNEAGTHYILNGEKQWITNSAFADIFIVYAKIDGEHFSAFIVEKDYSGVSTGPEEKKMGIKGSSTRTLILDQV
QVPKENLLGEPGKGHVIAFNILNIGRYKLAVGTIGASKRVIELSASYANQRQQFKTPISKFSLIGEKIANMSVKLYAMES
SVYRTVGLFEDKMGTLSEEEQKDGRQVAKSIAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAYRDSRI
NRIFEGTNEINRLIVPGTYMKKAMKGELPLFEKAKALQEELMMLMPEEPGDGVLEQEKYLLRNAKKTALMIAGLAAQKYG
KALDQEQEILVNIADIVSQIYAMEAAILRTEKAIRATGEDKNAQKILYTQIFAQEAFQEIESHAKESLIAMESGDSLRMM
LSALRKLTRFTPVNVIEKKRQAAKGVFEAEKYIV
>Mature_594_residues
MEQTKDHMKKGGAFLIEEVTADQMFTPEDFTDEHKMIAKTTEDYILGDVLPYIDEIEEHNFDHSVRLLKKAGELGLLGAD
VPEEYGGLGLDKISSALITEKFSRAGSFSLSYGAHVGIGTLPIVFFGTEEQKKKYLPSLATGEKFAAYALTEPGSGSDAL
GAKTTAVLNEAGTHYILNGEKQWITNSAFADIFIVYAKIDGEHFSAFIVEKDYSGVSTGPEEKKMGIKGSSTRTLILDQV
QVPKENLLGEPGKGHVIAFNILNIGRYKLAVGTIGASKRVIELSASYANQRQQFKTPISKFSLIGEKIANMSVKLYAMES
SVYRTVGLFEDKMGTLSEEEQKDGRQVAKSIAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAYRDSRI
NRIFEGTNEINRLIVPGTYMKKAMKGELPLFEKAKALQEELMMLMPEEPGDGVLEQEKYLLRNAKKTALMIAGLAAQKYG
KALDQEQEILVNIADIVSQIYAMEAAILRTEKAIRATGEDKNAQKILYTQIFAQEAFQEIESHAKESLIAMESGDSLRMM
LSALRKLTRFTPVNVIEKKRQAAKGVFEAEKYIV

Specific function: Involved in the degradation of long-chain fatty acids [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI21361497, Length=581, Percent_Identity=34.4234079173838, Blast_Score=311, Evalue=1e-84,
Organism=Homo sapiens, GI76496475, Length=414, Percent_Identity=39.1304347826087, Blast_Score=270, Evalue=4e-72,
Organism=Homo sapiens, GI4557235, Length=414, Percent_Identity=39.1304347826087, Blast_Score=269, Evalue=5e-72,
Organism=Homo sapiens, GI4557233, Length=403, Percent_Identity=34.2431761786601, Blast_Score=246, Evalue=5e-65,
Organism=Homo sapiens, GI7656849, Length=396, Percent_Identity=31.8181818181818, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI226958412, Length=394, Percent_Identity=33.756345177665, Blast_Score=220, Evalue=3e-57,
Organism=Homo sapiens, GI226958414, Length=374, Percent_Identity=34.7593582887701, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI4557231, Length=401, Percent_Identity=32.4189526184539, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI187960098, Length=401, Percent_Identity=32.4189526184539, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI4501857, Length=392, Percent_Identity=31.1224489795918, Blast_Score=187, Evalue=3e-47,
Organism=Homo sapiens, GI4501859, Length=393, Percent_Identity=30.5343511450382, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI4503943, Length=397, Percent_Identity=30.9823677581864, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI7669494, Length=375, Percent_Identity=31.2, Blast_Score=176, Evalue=7e-44,
Organism=Homo sapiens, GI48976061, Length=356, Percent_Identity=24.7191011235955, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI211971008, Length=356, Percent_Identity=24.7191011235955, Blast_Score=87, Evalue=4e-17,
Organism=Escherichia coli, GI87081958, Length=361, Percent_Identity=30.1939058171745, Blast_Score=132, Evalue=8e-32,
Organism=Escherichia coli, GI1786223, Length=362, Percent_Identity=27.0718232044199, Blast_Score=131, Evalue=2e-31,
Organism=Escherichia coli, GI87081702, Length=516, Percent_Identity=24.4186046511628, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87082384, Length=310, Percent_Identity=23.5483870967742, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71985184, Length=529, Percent_Identity=36.1058601134215, Blast_Score=281, Evalue=9e-76,
Organism=Caenorhabditis elegans, GI17534899, Length=367, Percent_Identity=35.6948228882834, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI71985192, Length=323, Percent_Identity=41.7956656346749, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17569725, Length=374, Percent_Identity=35.2941176470588, Blast_Score=219, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI17538396, Length=400, Percent_Identity=35.25, Blast_Score=218, Evalue=7e-57,
Organism=Caenorhabditis elegans, GI17570075, Length=415, Percent_Identity=31.566265060241, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17508101, Length=388, Percent_Identity=30.6701030927835, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17506239, Length=393, Percent_Identity=32.824427480916, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17533517, Length=354, Percent_Identity=29.3785310734463, Blast_Score=171, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI17534353, Length=394, Percent_Identity=29.6954314720812, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI71990804, Length=259, Percent_Identity=37.8378378378378, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI32563615, Length=238, Percent_Identity=38.655462184874, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI71982178, Length=285, Percent_Identity=30.1754385964912, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17551932, Length=367, Percent_Identity=27.5204359673025, Blast_Score=116, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17505929, Length=404, Percent_Identity=25.2475247524752, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17531909, Length=248, Percent_Identity=26.6129032258064, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI86563383, Length=285, Percent_Identity=28.7719298245614, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI86563381, Length=285, Percent_Identity=28.7719298245614, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17540912, Length=319, Percent_Identity=24.1379310344828, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562446, Length=343, Percent_Identity=23.9067055393586, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI281363737, Length=473, Percent_Identity=36.1522198731501, Blast_Score=261, Evalue=1e-69,
Organism=Drosophila melanogaster, GI21356377, Length=413, Percent_Identity=35.8353510895884, Blast_Score=251, Evalue=8e-67,
Organism=Drosophila melanogaster, GI24660351, Length=407, Percent_Identity=32.1867321867322, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI21355753, Length=402, Percent_Identity=34.0796019900498, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24646207, Length=402, Percent_Identity=31.3432835820896, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24666513, Length=387, Percent_Identity=31.7829457364341, Blast_Score=189, Evalue=7e-48,
Organism=Drosophila melanogaster, GI19920834, Length=401, Percent_Identity=28.428927680798, Blast_Score=158, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24652780, Length=268, Percent_Identity=23.8805970149254, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221473076, Length=353, Percent_Identity=24.929178470255, Blast_Score=67, Evalue=5e-11,
Organism=Drosophila melanogaster, GI45550141, Length=353, Percent_Identity=24.929178470255, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 65889; Mature: 65889

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTKDHMKKGGAFLIEEVTADQMFTPEDFTDEHKMIAKTTEDYILGDVLPYIDEIEEHN
CCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
FDHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRAGSFSLSYGAHVGIGT
CCHHHHHHHHCCCCCEECCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC
LPIVFFGTEEQKKKYLPSLATGEKFAAYALTEPGSGSDALGAKTTAVLNEAGTHYILNGE
EEEEEECCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCC
KQWITNSAFADIFIVYAKIDGEHFSAFIVEKDYSGVSTGPEEKKMGIKGSSTRTLILDQV
HHHHCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEECC
QVPKENLLGEPGKGHVIAFNILNIGRYKLAVGTIGASKRVIELSASYANQRQQFKTPISK
CCCHHHHCCCCCCCCEEEEEEEECCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHCHHHH
FSLIGEKIANMSVKLYAMESSVYRTVGLFEDKMGTLSEEEQKDGRQVAKSIAEYAIECSL
HHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVPGTYM
HHHHCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCEEECCCHHH
KKAMKGELPLFEKAKALQEELMMLMPEEPGDGVLEQEKYLLRNAKKTALMIAGLAAQKYG
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
KALDQEQEILVNIADIVSQIYAMEAAILRTEKAIRATGEDKNAQKILYTQIFAQEAFQEI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
ESHAKESLIAMESGDSLRMMLSALRKLTRFTPVNVIEKKRQAAKGVFEAEKYIV
HHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQTKDHMKKGGAFLIEEVTADQMFTPEDFTDEHKMIAKTTEDYILGDVLPYIDEIEEHN
CCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
FDHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRAGSFSLSYGAHVGIGT
CCHHHHHHHHCCCCCEECCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC
LPIVFFGTEEQKKKYLPSLATGEKFAAYALTEPGSGSDALGAKTTAVLNEAGTHYILNGE
EEEEEECCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCC
KQWITNSAFADIFIVYAKIDGEHFSAFIVEKDYSGVSTGPEEKKMGIKGSSTRTLILDQV
HHHHCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEECC
QVPKENLLGEPGKGHVIAFNILNIGRYKLAVGTIGASKRVIELSASYANQRQQFKTPISK
CCCHHHHCCCCCCCCEEEEEEEECCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHCHHHH
FSLIGEKIANMSVKLYAMESSVYRTVGLFEDKMGTLSEEEQKDGRQVAKSIAEYAIECSL
HHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVPGTYM
HHHHCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCEEECCCHHH
KKAMKGELPLFEKAKALQEELMMLMPEEPGDGVLEQEKYLLRNAKKTALMIAGLAAQKYG
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
KALDQEQEILVNIADIVSQIYAMEAAILRTEKAIRATGEDKNAQKILYTQIFAQEAFQEI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
ESHAKESLIAMESGDSLRMMLSALRKLTRFTPVNVIEKKRQAAKGVFEAEKYIV
HHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]