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The map label for this gene is yurY [H]

Identifier: 52787143

GI number: 52787143

Start: 3297017

End: 3297802

Strand: Reverse

Name: yurY [H]

Synonym: BLi03451

Alternate gene names: 52787143

Gene position: 3297802-3297017 (Counterclockwise)

Preceding gene: 52787144

Following gene: 52787142

Centisome position: 78.1

GC content: 48.09

Gene sequence:

>786_bases
ATGGCTGCTTCGACATTAACAATCAAAGATCTCCACGTTGAGATTGAAGGGAAAGAGATTTTAAAAGGTGTAAACCTTGA
AATAAAAGGCGGGGAATTCCACGCTGTAATGGGACCGAACGGAACGGGTAAATCAACTTTATCCGCGGCGATCATGGGAC
ACCCTAAATACGAAGTGACGAAAGGAAGCATCACGCTGGACGGCAAGGACGTTCTGGAAATGGAAGTGGACGAGCGCGCT
CAAGCCGGTCTGTTTTTGGCTATGCAGTATCCGAGTGAAATCAGCGGTGTTACAAATGCCGATTTTCTCCGTTCAGCGAT
CAACGCGCGCAGAGAAGAAGGCGACGAGATTTCTTTAATGAAATTCATCCGCAAAATGGACGAAAACATGGAATTTCTTG
AAATGGACCCTGATATGGCGCAGCGCTACCTGAACGAAGGTTTTTCAGGCGGTGAGAAAAAGCGCAACGAGATCCTTCAG
CTGATGATGATCGAACCGAAAATCGCGATTCTTGACGAAATCGATTCAGGTTTGGATATCGACGCCCTTAAAGTCGTTTC
AAAAGGAATCAACAAAATGCGCGGCGAGAACTTTGGCTGCCTGATCATCACGCACTATCAGCGCCTCTTGAACTACATTA
CGCCTGACCATGTGCACGTCATGATGCAGGGCCGCGTCGTGAAATCCGGCGGACCTGAACTTGCACAGCGCCTTGAGGCT
GAAGGATATGACTGGATTAAGCATGAGCTTGGAATCGAAGACGAAACTGTCGGTCAAGAAGCGTAA

Upstream 100 bases:

>100_bases
AAGATAGGAAGACTATTGTTGTATTCAATTTTCATTTGTTATAAAATTAGAATGAGAATAAATTGAGAATGATGATTATC
TATAATTGGAGGTATATTTC

Downstream 100 bases:

>100_bases
GCGTTAGGGGGATAAACATGACATTGGAAACAAAACTATCTGTAGATCGGGAATATGTCAAAAGCTTCTCTGAGAAGCAC
CAGGAACCGGCATGGCTGCA

Product: YurY

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MAASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVTKGSITLDGKDVLEMEVDERA
QAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRKMDENMEFLEMDPDMAQRYLNEGFSGGEKKRNEILQ
LMMIEPKIAILDEIDSGLDIDALKVVSKGINKMRGENFGCLIITHYQRLLNYITPDHVHVMMQGRVVKSGGPELAQRLEA
EGYDWIKHELGIEDETVGQEA

Sequences:

>Translated_261_residues
MAASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVTKGSITLDGKDVLEMEVDERA
QAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRKMDENMEFLEMDPDMAQRYLNEGFSGGEKKRNEILQ
LMMIEPKIAILDEIDSGLDIDALKVVSKGINKMRGENFGCLIITHYQRLLNYITPDHVHVMMQGRVVKSGGPELAQRLEA
EGYDWIKHELGIEDETVGQEA
>Mature_260_residues
AASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVTKGSITLDGKDVLEMEVDERAQ
AGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRKMDENMEFLEMDPDMAQRYLNEGFSGGEKKRNEILQL
MMIEPKIAILDEIDSGLDIDALKVVSKGINKMRGENFGCLIITHYQRLLNYITPDHVHVMMQGRVVKSGGPELAQRLEAE
GYDWIKHELGIEDETVGQEA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9961252, Length=224, Percent_Identity=31.6964285714286, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI4505771, Length=224, Percent_Identity=31.6964285714286, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI42741659, Length=225, Percent_Identity=30.6666666666667, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI9961250, Length=231, Percent_Identity=30.7359307359307, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI255708477, Length=214, Percent_Identity=29.4392523364486, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI148612844, Length=214, Percent_Identity=29.4392523364486, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI42490749, Length=231, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787972, Length=246, Percent_Identity=52.0325203252033, Blast_Score=266, Evalue=9e-73,
Organism=Escherichia coli, GI1788761, Length=226, Percent_Identity=26.5486725663717, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1789593, Length=229, Percent_Identity=26.2008733624454, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786654, Length=244, Percent_Identity=26.2295081967213, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787759, Length=252, Percent_Identity=29.7619047619048, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786698, Length=188, Percent_Identity=28.7234042553192, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787029, Length=242, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787500, Length=210, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789891, Length=218, Percent_Identity=27.5229357798165, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789864, Length=249, Percent_Identity=26.1044176706827, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786319, Length=195, Percent_Identity=28.2051282051282, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787143, Length=229, Percent_Identity=25.764192139738, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87081709, Length=225, Percent_Identity=22.6666666666667, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=240, Percent_Identity=28.75, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17541710, Length=220, Percent_Identity=28.1818181818182, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI193202349, Length=235, Percent_Identity=29.3617021276596, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI71996809, Length=245, Percent_Identity=26.530612244898, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17567269, Length=234, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI212646699, Length=244, Percent_Identity=26.6393442622951, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193211017, Length=245, Percent_Identity=26.1224489795918, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=243, Percent_Identity=26.3374485596708, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17567265, Length=219, Percent_Identity=28.7671232876712, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=236, Percent_Identity=27.5423728813559, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=237, Percent_Identity=26.5822784810127, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI115535101, Length=257, Percent_Identity=26.4591439688716, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=237, Percent_Identity=27.0042194092827, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=221, Percent_Identity=27.6018099547511, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115533592, Length=221, Percent_Identity=28.0542986425339, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=222, Percent_Identity=25.6756756756757, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17533971, Length=214, Percent_Identity=29.9065420560748, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=197, Percent_Identity=28.4263959390863, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323217, Length=216, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281363262, Length=220, Percent_Identity=32.2727272727273, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24653245, Length=220, Percent_Identity=32.2727272727273, Blast_Score=81, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 29043; Mature: 28912

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVT
CCCCEEEEEEEEEEECCHHHHCCCCEEEECCEEEEEECCCCCCCHHHHHHHCCCCCEEEE
KGSITLDGKDVLEMEVDERAQAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLM
CCEEEECCCHHEEEEHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCCHHHH
KFIRKMDENMEFLEMDPDMAQRYLNEGFSGGEKKRNEILQLMMIEPKIAILDEIDSGLDI
HHHHHHCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEHHCCCCCCH
DALKVVSKGINKMRGENFGCLIITHYQRLLNYITPDHVHVMMQGRVVKSGGPELAQRLEA
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEEEEECEEEECCCHHHHHHHHC
EGYDWIKHELGIEDETVGQEA
CCCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVT
CCCEEEEEEEEEEECCHHHHCCCCEEEECCEEEEEECCCCCCCHHHHHHHCCCCCEEEE
KGSITLDGKDVLEMEVDERAQAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLM
CCEEEECCCHHEEEEHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCCHHHH
KFIRKMDENMEFLEMDPDMAQRYLNEGFSGGEKKRNEILQLMMIEPKIAILDEIDSGLDI
HHHHHHCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEHHCCCCCCH
DALKVVSKGINKMRGENFGCLIITHYQRLLNYITPDHVHVMMQGRVVKSGGPELAQRLEA
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEEEEECEEEECCCHHHHHHHHC
EGYDWIKHELGIEDETVGQEA
CCCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]