| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
Click here to switch to the map view.
The map label for this gene is yugP [H]
Identifier: 52787004
GI number: 52787004
Start: 3171191
End: 3171871
Strand: Reverse
Name: yugP [H]
Synonym: BLi03306
Alternate gene names: 52787004
Gene position: 3171871-3171191 (Counterclockwise)
Preceding gene: 52787005
Following gene: 52787003
Centisome position: 75.12
GC content: 50.22
Gene sequence:
>681_bases ATGAGCATGATTTTTTACTTGTTAACATTTGCTGCATTAGGTTTATCGATTTGGGCACAATTTAAAGTAAAGAGCAACTT TGAAAAATATTCAAAAGTAGAGGCGTCAAGCGGGAGAACTGGAGCCGAAGTGGCCAGACAGATTCTCGACCGAAACGGCC TTTACGATGTCCCGGTTGAACCGGTAAGAGGAACCTTGACAGACCATTATGACCCGACAGCACGCGTTGTGCGCCTGTCC GAACCCGTATACTACGGCCGTTCAATCGCAGCGGTTTCCGTTGCTTCCCATGAATGCGGACATGCCCTGCAGCACCAGGA GTCATACGGCGCACTTGTTTTGAGGCATAAGATGTTTCCGGTCGTGAACTTTTCTTCGGGAGTGGCGCCGTTTTTGTTTA TCGGCGGAATGCTGCTCGGAAGCCTGAATCTGATCGGACTCGGCATCATATTGTTTTCTGCGGCCGTATTCTTCCAGCTT GTGACATTGCCTGTTGAATTTAACGCAAGCTCCCGGGCAAAAAGGATCATCGTTTCAGAAGGAATGATCCGCAACACGGA GGAAAGAGGCGTCAGCAAGGTGCTGGATGCCGCGGCTCTGACATACGTCGCAGCAGCGCTTGTTTCGCTGTTTGAGCTGC TGCGCTTCGTCGCAATTTTCCTGTCCGGTCGTAATGACTAA
Upstream 100 bases:
>100_bases CAAATAGTGCACTTTTCTGTACAAAAGGAAATCCCTCGGGCTAAAATATATTTACAATTACAATTTTTAAACAACTTATC ACAAGAGGGAAGATGATTGC
Downstream 100 bases:
>100_bases CCATTCGTTTTAAGGAGGTGGCCCCTTACCATATTTGGTAAGGGCTTTTTTTGAATATCCTGAATCTCATACTCGTCATA CTTTTAATTGCAGCTACGGC
Product: YugP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSMIFYLLTFAALGLSIWAQFKVKSNFEKYSKVEASSGRTGAEVARQILDRNGLYDVPVEPVRGTLTDHYDPTARVVRLS EPVYYGRSIAAVSVASHECGHALQHQESYGALVLRHKMFPVVNFSSGVAPFLFIGGMLLGSLNLIGLGIILFSAAVFFQL VTLPVEFNASSRAKRIIVSEGMIRNTEERGVSKVLDAAALTYVAAALVSLFELLRFVAIFLSGRND
Sequences:
>Translated_226_residues MSMIFYLLTFAALGLSIWAQFKVKSNFEKYSKVEASSGRTGAEVARQILDRNGLYDVPVEPVRGTLTDHYDPTARVVRLS EPVYYGRSIAAVSVASHECGHALQHQESYGALVLRHKMFPVVNFSSGVAPFLFIGGMLLGSLNLIGLGIILFSAAVFFQL VTLPVEFNASSRAKRIIVSEGMIRNTEERGVSKVLDAAALTYVAAALVSLFELLRFVAIFLSGRND >Mature_225_residues SMIFYLLTFAALGLSIWAQFKVKSNFEKYSKVEASSGRTGAEVARQILDRNGLYDVPVEPVRGTLTDHYDPTARVVRLSE PVYYGRSIAAVSVASHECGHALQHQESYGALVLRHKMFPVVNFSSGVAPFLFIGGMLLGSLNLIGLGIILFSAAVFFQLV TLPVEFNASSRAKRIIVSEGMIRNTEERGVSKVLDAAALTYVAAALVSLFELLRFVAIFLSGRND
Specific function: Unknown
COG id: COG2738
COG function: function code R; Predicted Zn-dependent protease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007395 [H]
Pfam domain/function: PF04298 Zn_peptidase_2 [H]
EC number: NA
Molecular weight: Translated: 24711; Mature: 24580
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMIFYLLTFAALGLSIWAQFKVKSNFEKYSKVEASSGRTGAEVARQILDRNGLYDVPVE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC PVRGTLTDHYDPTARVVRLSEPVYYGRSIAAVSVASHECGHALQHQESYGALVLRHKMFP CCCCCCCCCCCCHHHEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VVNFSSGVAPFLFIGGMLLGSLNLIGLGIILFSAAVFFQLVTLPVEFNASSRAKRIIVSE EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHEEHHCC GMIRNTEERGVSKVLDAAALTYVAAALVSLFELLRFVAIFLSGRND CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SMIFYLLTFAALGLSIWAQFKVKSNFEKYSKVEASSGRTGAEVARQILDRNGLYDVPVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC PVRGTLTDHYDPTARVVRLSEPVYYGRSIAAVSVASHECGHALQHQESYGALVLRHKMFP CCCCCCCCCCCCHHHEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VVNFSSGVAPFLFIGGMLLGSLNLIGLGIILFSAAVFFQLVTLPVEFNASSRAKRIIVSE EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHEEHHCC GMIRNTEERGVSKVLDAAALTYVAAALVSLFELLRFVAIFLSGRND CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]