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The map label for this gene is ykoQ [H]

Identifier: 52786987

GI number: 52786987

Start: 3152068

End: 3152883

Strand: Reverse

Name: ykoQ [H]

Synonym: BLi03289

Alternate gene names: 52786987

Gene position: 3152883-3152068 (Counterclockwise)

Preceding gene: 52786988

Following gene: 52786985

Centisome position: 74.67

GC content: 42.03

Gene sequence:

>816_bases
ATGTTTATTATCGCATGTTTATTGATTATCTTAGGCCTCATGCCTTTTTTATATAAAGCGAACCACAATACAAAAGATGT
GAAAGTCAACACGATTTCGGTCGAGCGCGTGCAGGCTCCCGCTTTAAAGAAAAAGCTGAACATTCTTCATCTGTCCGATC
TTCATTTAGAAAACATTTCGATTTCACCTGAACGGATTCTTGAACTTGCCAATAAAAAACGAGTGGATCTCATTGCTTTA
ACAGGAGATTTTCTTGATAGGAAGAGAAATATTCCAAAGCTTGCAAACTACTTAAAAGCTTTGAAAAAACTGAAGCCGGC
ATACGGGATGTACGCTGTATTCGGCAACCATGACTACCTATTGAAAGACGAACACTTTCGGAAGCTGAAACGTGTACTGG
AAGATAACGGATGCATCACCCTACAGAACCAGCATGTCTCCATTGAAGTGGAAGGCGAGACACTCAACATTATCGGGATT
GATGATTACAGCACGAAGCGAAGCGATATTGCCGGTTCATATAAAGGGCTTAAAGAGGGCTACAACCTTGTATTGACGCA
TGATCCGAACGTTGTGCTTGATATGCAGGAATTTCACTTTGACTATCTTCTTTCAGGACATTTTCACGGCGGTCAGATTC
ATTGGCCGAAGCCTTATCATCTCGTGAAGATGGGAAAGCTTGTGCGAATGAATATGATAAAAGGTCTTCACTACCATCAT
GACAAACCGTTTTATATCAGCGAGGGATTGGGTCAGACTGGGGCGAACATCCGAATCGGAAGCCGTCCGGAAATGACGTT
CCATCACATTTCATAA

Upstream 100 bases:

>100_bases
AATCGGTTTTGTTATGGGTAAAAAGAATGATATTCTATTATTTCCCACTGTAAAACCGCCTGCCAACTTACTATACTAGT
AAGAGGGAGGAGATATTGAA

Downstream 100 bases:

>100_bases
AAAGAAGAGGCTGTTGCATTTTTTTGCATCAGTCTCTTTTTTATTTATTTCTGCAGATAGGACTTGAACAATTTTTCTTT
CGAAATAAACAAATATTGGG

Product: YkoQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MFIIACLLIILGLMPFLYKANHNTKDVKVNTISVERVQAPALKKKLNILHLSDLHLENISISPERILELANKKRVDLIAL
TGDFLDRKRNIPKLANYLKALKKLKPAYGMYAVFGNHDYLLKDEHFRKLKRVLEDNGCITLQNQHVSIEVEGETLNIIGI
DDYSTKRSDIAGSYKGLKEGYNLVLTHDPNVVLDMQEFHFDYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHH
DKPFYISEGLGQTGANIRIGSRPEMTFHHIS

Sequences:

>Translated_271_residues
MFIIACLLIILGLMPFLYKANHNTKDVKVNTISVERVQAPALKKKLNILHLSDLHLENISISPERILELANKKRVDLIAL
TGDFLDRKRNIPKLANYLKALKKLKPAYGMYAVFGNHDYLLKDEHFRKLKRVLEDNGCITLQNQHVSIEVEGETLNIIGI
DDYSTKRSDIAGSYKGLKEGYNLVLTHDPNVVLDMQEFHFDYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHH
DKPFYISEGLGQTGANIRIGSRPEMTFHHIS
>Mature_271_residues
MFIIACLLIILGLMPFLYKANHNTKDVKVNTISVERVQAPALKKKLNILHLSDLHLENISISPERILELANKKRVDLIAL
TGDFLDRKRNIPKLANYLKALKKLKPAYGMYAVFGNHDYLLKDEHFRKLKRVLEDNGCITLQNQHVSIEVEGETLNIIGI
DDYSTKRSDIAGSYKGLKEGYNLVLTHDPNVVLDMQEFHFDYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHH
DKPFYISEGLGQTGANIRIGSRPEMTFHHIS

Specific function: Unknown

COG id: COG1408

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081695, Length=230, Percent_Identity=28.2608695652174, Blast_Score=78, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI115535028, Length=282, Percent_Identity=28.3687943262411, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI115535030, Length=282, Percent_Identity=28.3687943262411, Blast_Score=78, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31071; Mature: 31071

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIIACLLIILGLMPFLYKANHNTKDVKVNTISVERVQAPALKKKLNILHLSDLHLENIS
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHCHHHHHHCCEEEEECCEECCCC
ISPERILELANKKRVDLIALTGDFLDRKRNIPKLANYLKALKKLKPAYGMYAVFGNHDYL
CCHHHHHHHHCCCCEEEEEEECHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEE
LKDEHFRKLKRVLEDNGCITLQNQHVSIEVEGETLNIIGIDDYSTKRSDIAGSYKGLKEG
ECHHHHHHHHHHHCCCCEEEEECCEEEEEECCCEEEEEECCCCCCCHHHHCHHHHHHHCC
YNLVLTHDPNVVLDMQEFHFDYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHH
CEEEEEECCCEEEEHHHHCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHCHHHCC
DKPFYISEGLGQTGANIRIGSRPEMTFHHIS
CCCEEEECCCCCCCCEEEECCCCCCEEEECC
>Mature Secondary Structure
MFIIACLLIILGLMPFLYKANHNTKDVKVNTISVERVQAPALKKKLNILHLSDLHLENIS
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHCHHHHHHCCEEEEECCEECCCC
ISPERILELANKKRVDLIALTGDFLDRKRNIPKLANYLKALKKLKPAYGMYAVFGNHDYL
CCHHHHHHHHCCCCEEEEEEECHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEE
LKDEHFRKLKRVLEDNGCITLQNQHVSIEVEGETLNIIGIDDYSTKRSDIAGSYKGLKEG
ECHHHHHHHHHHHCCCCEEEEECCEEEEEECCCEEEEEECCCCCCCHHHHCHHHHHHHCC
YNLVLTHDPNVVLDMQEFHFDYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHH
CEEEEEECCCEEEEHHHHCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHCHHHCC
DKPFYISEGLGQTGANIRIGSRPEMTFHHIS
CCCEEEECCCCCCCCEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]