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The map label for this gene is yhcS [H]

Identifier: 52786959

GI number: 52786959

Start: 3125885

End: 3126442

Strand: Reverse

Name: yhcS [H]

Synonym: BLi03259

Alternate gene names: 52786959

Gene position: 3126442-3125885 (Counterclockwise)

Preceding gene: 52786960

Following gene: 52786957

Centisome position: 74.04

GC content: 45.7

Gene sequence:

>558_bases
ATGGTTGCGTGCGGCGCTTATTTTACAACAACGAATGTGTTCAAGCTGATGCACGGCTACGCTCTATTTTCATTTCAGCA
GATGAAAGAAGAGGAAAAGCCTGAAAAACCTCCGATTCAGACGACGAAAAAAGAAAAGACGGCAATTGATCAAACATTTG
AAACCGGGGAGAAAATCGGTGATCTTGTTATTCCGAAAATCAATGCAAGGCTTCCGATATATCACGGAACAGATGAAGAC
GAGCTGCAAAAAGGCGTGGGCCATTTCGCAGGATCCGTTCTGCCTGGAGAAGATGACAACTCGGTTTTATCAGGCCACCG
GGATACGGTTTTCCGAAAACTCGGCCGAGTGGGGAAAGGCGATCAGTTAATTGTTGAAGCTTCCTACGGAACTTTTACAT
ACAAAGTGAAAAAGGTCCGAATCGTGGATGCGGATGACCGGACGGTGATAGTTCCAAAGCCGAGAGCGACATTGACGGTT
TCCACCTGCTATCCTTTTGACTTTATCGGTTCAGCACCGGAGCGGTATATATTGGTCGCAGATTTGATTAAAACATAA

Upstream 100 bases:

>100_bases
ACTTCCCATTCTAAGTCTGTATAGAATGGGAAGTTTTTATAAGGAGTGAAAGGAAATTAAGGCACATCGAAAAAAGATCA
TCTGGCTTGCAGCCATTGCG

Downstream 100 bases:

>100_bases
AAAACAGCGGAATCTCAGGCGAATCCGCTGTTTTTTTATGTTATCTCATGTTTGTTCTGTTTTCTAGAAGTCTTGGTGCG
GTTAGCAGCAGTATACAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MVACGAYFTTTNVFKLMHGYALFSFQQMKEEEKPEKPPIQTTKKEKTAIDQTFETGEKIGDLVIPKINARLPIYHGTDED
ELQKGVGHFAGSVLPGEDDNSVLSGHRDTVFRKLGRVGKGDQLIVEASYGTFTYKVKKVRIVDADDRTVIVPKPRATLTV
STCYPFDFIGSAPERYILVADLIKT

Sequences:

>Translated_185_residues
MVACGAYFTTTNVFKLMHGYALFSFQQMKEEEKPEKPPIQTTKKEKTAIDQTFETGEKIGDLVIPKINARLPIYHGTDED
ELQKGVGHFAGSVLPGEDDNSVLSGHRDTVFRKLGRVGKGDQLIVEASYGTFTYKVKKVRIVDADDRTVIVPKPRATLTV
STCYPFDFIGSAPERYILVADLIKT
>Mature_185_residues
MVACGAYFTTTNVFKLMHGYALFSFQQMKEEEKPEKPPIQTTKKEKTAIDQTFETGEKIGDLVIPKINARLPIYHGTDED
ELQKGVGHFAGSVLPGEDDNSVLSGHRDTVFRKLGRVGKGDQLIVEASYGTFTYKVKKVRIVDADDRTVIVPKPRATLTV
STCYPFDFIGSAPERYILVADLIKT

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 20605; Mature: 20605

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVACGAYFTTTNVFKLMHGYALFSFQQMKEEEKPEKPPIQTTKKEKTAIDQTFETGEKIG
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
DLVIPKINARLPIYHGTDEDELQKGVGHFAGSVLPGEDDNSVLSGHRDTVFRKLGRVGKG
CEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCCCC
DQLIVEASYGTFTYKVKKVRIVDADDRTVIVPKPRATLTVSTCYPFDFIGSAPERYILVA
CEEEEEECCCEEEEEEEEEEEEECCCCEEEEECCCCEEEEEECCCHHHCCCCCCCEEEEE
DLIKT
EHHCC
>Mature Secondary Structure
MVACGAYFTTTNVFKLMHGYALFSFQQMKEEEKPEKPPIQTTKKEKTAIDQTFETGEKIG
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
DLVIPKINARLPIYHGTDEDELQKGVGHFAGSVLPGEDDNSVLSGHRDTVFRKLGRVGKG
CEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCCCC
DQLIVEASYGTFTYKVKKVRIVDADDRTVIVPKPRATLTVSTCYPFDFIGSAPERYILVA
CEEEEEECCCEEEEEEEEEEEEECCCCEEEEECCCCEEEEEECCCHHHCCCCCCCEEEEE
DLIKT
EHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]