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The map label for this gene is ytqB [H]

Identifier: 52786912

GI number: 52786912

Start: 3070429

End: 3071106

Strand: Direct

Name: ytqB [H]

Synonym: BLi03188

Alternate gene names: 52786912

Gene position: 3070429-3071106 (Clockwise)

Preceding gene: 52786911

Following gene: 52786913

Centisome position: 72.71

GC content: 49.26

Gene sequence:

>678_bases
ATGGGAAGTCTTAAACGCCATCAACGGGGAATTGGAAAGGCGCGGCAGCCATCAGGGGAAATGGTTCAACAAGGCGAAAG
AAGGCATGGCCACATGAAGCTCAAGAAAATCCTCCCGTATGCGAAAGAACTGCTGAAAACAGCCGCAGGCGAAGGAGACA
TCGTCATTGATGCGACAATGGGAAACGGACATGATACTCACTTTTTAGCTGAACTTGTCGGTGAAAGCGGGCATGTCTAT
GCCTTTGACATTCAAGAAGCAGCTCTTATGAATACTGCCGAAAGACTTGGAAACGAGTATAAAGACCGGGTGACATTGAT
TCAAAAAAGCCATGATGAGCTCACCACTTCGCTTCCTGACGACATCTCAGGCAAGGTGGCAGCAGCCGTGTTTAACCTCG
GATATCTTCCGGGAGGCGACAAATCGGTGACGACAAAAAGCGATTCGACCATCGCCAGCATCAAGCAGCTTCTCAAAATC
CTGAAAAATGAGGGGCTGATCGTGCTTGTCGTCTACCATGGCCATCCCGAAGGAAAGCGGGAAAAAGACGCCCTGCTCGA
ATTTTGTGCATCGCTCGACCAGGATACGGCCCGTGTCCTCTGTTACCAATATTTAAACCAGCGAAACGATCCGCCGTTTA
TCATTGCGATCGAAAAGAAAGAAGCGGTCCAAAAGTGA

Upstream 100 bases:

>100_bases
GCGATCAGCTTGAAATTCTTCCGCCGGAAATGATCATTCACCGGATTACGGGTGACGGACCGATCGAATTGATGGTCGGA
CCGATGTGGAGCGTCAATAA

Downstream 100 bases:

>100_bases
CATCCTGAAATCCTCCGTTTGGAGGATTTTTTTCATTCAAACATAATGTAAGCGATATCAAAATAAAATATGAACACTTT
AGATTTCGGAATTTTCTAAA

Product: YtqB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MGSLKRHQRGIGKARQPSGEMVQQGERRHGHMKLKKILPYAKELLKTAAGEGDIVIDATMGNGHDTHFLAELVGESGHVY
AFDIQEAALMNTAERLGNEYKDRVTLIQKSHDELTTSLPDDISGKVAAAVFNLGYLPGGDKSVTTKSDSTIASIKQLLKI
LKNEGLIVLVVYHGHPEGKREKDALLEFCASLDQDTARVLCYQYLNQRNDPPFIIAIEKKEAVQK

Sequences:

>Translated_225_residues
MGSLKRHQRGIGKARQPSGEMVQQGERRHGHMKLKKILPYAKELLKTAAGEGDIVIDATMGNGHDTHFLAELVGESGHVY
AFDIQEAALMNTAERLGNEYKDRVTLIQKSHDELTTSLPDDISGKVAAAVFNLGYLPGGDKSVTTKSDSTIASIKQLLKI
LKNEGLIVLVVYHGHPEGKREKDALLEFCASLDQDTARVLCYQYLNQRNDPPFIIAIEKKEAVQK
>Mature_224_residues
GSLKRHQRGIGKARQPSGEMVQQGERRHGHMKLKKILPYAKELLKTAAGEGDIVIDATMGNGHDTHFLAELVGESGHVYA
FDIQEAALMNTAERLGNEYKDRVTLIQKSHDELTTSLPDDISGKVAAAVFNLGYLPGGDKSVTTKSDSTIASIKQLLKIL
KNEGLIVLVVYHGHPEGKREKDALLEFCASLDQDTARVLCYQYLNQRNDPPFIIAIEKKEAVQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 24834; Mature: 24703

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLKRHQRGIGKARQPSGEMVQQGERRHGHMKLKKILPYAKELLKTAAGEGDIVIDATM
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
GNGHDTHFLAELVGESGHVYAFDIQEAALMNTAERLGNEYKDRVTLIQKSHDELTTSLPD
CCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DISGKVAAAVFNLGYLPGGDKSVTTKSDSTIASIKQLLKILKNEGLIVLVVYHGHPEGKR
CCCCHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCH
EKDALLEFCASLDQDTARVLCYQYLNQRNDPPFIIAIEKKEAVQK
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCC
>Mature Secondary Structure 
GSLKRHQRGIGKARQPSGEMVQQGERRHGHMKLKKILPYAKELLKTAAGEGDIVIDATM
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
GNGHDTHFLAELVGESGHVYAFDIQEAALMNTAERLGNEYKDRVTLIQKSHDELTTSLPD
CCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DISGKVAAAVFNLGYLPGGDKSVTTKSDSTIASIKQLLKILKNEGLIVLVVYHGHPEGKR
CCCCHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCH
EKDALLEFCASLDQDTARVLCYQYLNQRNDPPFIIAIEKKEAVQK
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]