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The map label for this gene is ytqA [H]

Identifier: 52786911

GI number: 52786911

Start: 3069557

End: 3070525

Strand: Direct

Name: ytqA [H]

Synonym: BLi03187

Alternate gene names: 52786911

Gene position: 3069557-3070525 (Clockwise)

Preceding gene: 52786904

Following gene: 52786912

Centisome position: 72.69

GC content: 50.26

Gene sequence:

>969_bases
TTGCATCAGAACAACCCTTTTCCATATACGAACAGTGAAAAACGATATCATACATGGAATTATCATTTAAGAAATCATTT
CGGTCATAAAGTGTTTAAAGTCGCCCTTGACGGAGGCTTTGACTGCCCGAACCGCGACGGTACGGTCGCACACGGCGGAT
GCACATTTTGCAGCGCCGCAGGGAGCGGAGACTTTGCGGGAAACCGCGCCGACGATCTGATTACCCAATTTAATGAAGTG
CGCGACAGAATGCATGAAAAATGGAAAGACGGCAAATACATGGCGTACTTTCAAGCATTTACGAATACGCACGCTCCCGT
CAGCGTTCTTCGCGAAAAATACGAGACCGTCCTCGGCCTTGACGGCGTAGTCGGCCTTTCAATCGCTACCCGGCCGGATT
GTCTACCTGACGATGTTGTCGAATATCTTGCCGAGCTTAATGAACGCACATACCTCTGGGTGGAGCTCGGCCTTCAGACC
GTTCATGAACGGACGGCTGATTTGATCAACCGCGCCCATGATTTCGACTGCTACGTGGAAGGCGTGAACAAGCTGAGGAA
ACACGGCATCCGGGTCTGCTCCCACATCATTAACGGACTGCCTCTCGAAGACCGCGGCATGATGATGGAAACCGCAAAAG
CCGTCGCCGATTTGGACGTGCAGGGGATTAAAATCCATCTGCTCCACCTGTTAAAAGGGACACCAATGGTGAAGCAGTAT
GAAAAAGGAAAATTAACGTTCCTTTCTCAAGATGAATATGTCCAGCTTGTTTGCGATCAGCTTGAAATTCTTCCGCCGGA
AATGATCATTCACCGGATTACGGGTGACGGACCGATCGAATTGATGGTCGGACCGATGTGGAGCGTCAATAAATGGGAAG
TCTTAAACGCCATCAACGGGGAATTGGAAAGGCGCGGCAGCCATCAGGGGAAATGGTTCAACAAGGCGAAAGAAGGCATG
GCCACATGA

Upstream 100 bases:

>100_bases
GCTGTGATCATTGAAGAAAATAATTGGGAATCGGTTTGTTCTTATCGTGTTTATTTGCTACAATTTTAGGATGCGTGATA
CTAAAAGGAGGTCCTTTTGT

Downstream 100 bases:

>100_bases
AGCTCAAGAAAATCCTCCCGTATGCGAAAGAACTGCTGAAAACAGCCGCAGGCGAAGGAGACATCGTCATTGATGCGACA
ATGGGAAACGGACATGATAC

Product: YtqA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MHQNNPFPYTNSEKRYHTWNYHLRNHFGHKVFKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRADDLITQFNEV
RDRMHEKWKDGKYMAYFQAFTNTHAPVSVLREKYETVLGLDGVVGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQT
VHERTADLINRAHDFDCYVEGVNKLRKHGIRVCSHIINGLPLEDRGMMMETAKAVADLDVQGIKIHLLHLLKGTPMVKQY
EKGKLTFLSQDEYVQLVCDQLEILPPEMIIHRITGDGPIELMVGPMWSVNKWEVLNAINGELERRGSHQGKWFNKAKEGM
AT

Sequences:

>Translated_322_residues
MHQNNPFPYTNSEKRYHTWNYHLRNHFGHKVFKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRADDLITQFNEV
RDRMHEKWKDGKYMAYFQAFTNTHAPVSVLREKYETVLGLDGVVGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQT
VHERTADLINRAHDFDCYVEGVNKLRKHGIRVCSHIINGLPLEDRGMMMETAKAVADLDVQGIKIHLLHLLKGTPMVKQY
EKGKLTFLSQDEYVQLVCDQLEILPPEMIIHRITGDGPIELMVGPMWSVNKWEVLNAINGELERRGSHQGKWFNKAKEGM
AT
>Mature_322_residues
MHQNNPFPYTNSEKRYHTWNYHLRNHFGHKVFKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRADDLITQFNEV
RDRMHEKWKDGKYMAYFQAFTNTHAPVSVLREKYETVLGLDGVVGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQT
VHERTADLINRAHDFDCYVEGVNKLRKHGIRVCSHIINGLPLEDRGMMMETAKAVADLDVQGIKIHLLHLLKGTPMVKQY
EKGKLTFLSQDEYVQLVCDQLEILPPEMIIHRITGDGPIELMVGPMWSVNKWEVLNAINGELERRGSHQGKWFNKAKEGM
AT

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=288, Percent_Identity=40.2777777777778, Blast_Score=233, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36599; Mature: 36599

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQNNPFPYTNSEKRYHTWNYHLRNHFGHKVFKVALDGGFDCPNRDGTVAHGGCTFCSAA
CCCCCCCCCCCCCCCEEEEEHHHHHHCCCEEEEEEECCCCCCCCCCCCEEECCCCEECCC
GSGDFAGNRADDLITQFNEVRDRMHEKWKDGKYMAYFQAFTNTHAPVSVLREKYETVLGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCC
DGVVGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTADLINRAHDFDCYVE
CCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHH
GVNKLRKHGIRVCSHIINGLPLEDRGMMMETAKAVADLDVQGIKIHLLHLLKGTPMVKQY
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
EKGKLTFLSQDEYVQLVCDQLEILPPEMIIHRITGDGPIELMVGPMWSVNKWEVLNAING
CCCCEEEECCHHHHHHHHHHHHHCCHHHHHEECCCCCCEEEEECCCCCCCHHHHHHHHHH
ELERRGSHQGKWFNKAKEGMAT
HHHHCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MHQNNPFPYTNSEKRYHTWNYHLRNHFGHKVFKVALDGGFDCPNRDGTVAHGGCTFCSAA
CCCCCCCCCCCCCCCEEEEEHHHHHHCCCEEEEEEECCCCCCCCCCCCEEECCCCEECCC
GSGDFAGNRADDLITQFNEVRDRMHEKWKDGKYMAYFQAFTNTHAPVSVLREKYETVLGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCC
DGVVGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTADLINRAHDFDCYVE
CCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHH
GVNKLRKHGIRVCSHIINGLPLEDRGMMMETAKAVADLDVQGIKIHLLHLLKGTPMVKQY
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
EKGKLTFLSQDEYVQLVCDQLEILPPEMIIHRITGDGPIELMVGPMWSVNKWEVLNAING
CCCCEEEECCHHHHHHHHHHHHHCCHHHHHEECCCCCCEEEEECCCCCCCHHHHHHHHHH
ELERRGSHQGKWFNKAKEGMAT
HHHHCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]