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The map label for this gene is ytoP [H]

Identifier: 52786862

GI number: 52786862

Start: 3018931

End: 3020004

Strand: Reverse

Name: ytoP [H]

Synonym: BLi03137

Alternate gene names: 52786862

Gene position: 3020004-3018931 (Counterclockwise)

Preceding gene: 52786864

Following gene: 52786860

Centisome position: 71.52

GC content: 49.91

Gene sequence:

>1074_bases
ATGAATCAGGAAACGAGAACGCTTTTTCAAACGCTTACGGAGCTCCCCGGCGCCCCGGGAAACGAACATCTTGTCCGTCG
CTTCATGAAAAAAGAGCTTGAAAAATATGCTGATGAGATCATCCAGGACAGACTTGGAAGCGTGTTCGGCGTTAAACATG
GACCTGAAGGCAGTCCAAAAATTATGGTGGCCGGCCATATGGATGAAGTGGGGTTTATGGTCACATCAATTACAGATAAC
GGCCTGCTTCGGTTTCAAACGCTGGGCGGCTGGTGGAGTCAGGTTTTATTGGCCCAGCGGGTGGAAATCCACACGGACAA
CGGACCGATCCCCGGCGTCATCGCGAGCACGCCTCCTCATCTTTTGACAGATGAGCAGAGGAGACGTCCGATGGATATCA
AAAACATGATGATTGATATCGGGGCGGATGACAGGGAAGATGCCGAACGCATCGGTGTCAAACCAGGCCAGCAAATCGTA
CCGATCTGTCCGTTTACCCCGATGGCAAATGAAAAGAAGATCCTTGCGAAAGCATGGGATAACCGCTACGGCTGCGGACT
CAGCATTGAATTGCTGAAAGAACTGCAAGGAACAGAACTTCCGAACAATCTTTACTCAGGTGCGACCGTCCAGGAAGAGC
TCGGAACAAGAGGCGCGCAAACTGCGGCCAATATGATACAGCCTGACTTGTTTTTCGCGCTTGATGCAAGTCCGGCAAAC
GATTCGAGCGGCGACAAAAATCAATTTGGCCAGCTTGGCAAAGGAGTGCTGTTGAGGATTTTCGACCGGACCATGGTGAT
GGACAGCGAAATGAGAAATTTTGTGCTGGATACGGCAGAGACAAATGACATCCCGTATCAATATTTTGTTTCTCCGGGAG
GAACCGACGCCGGCCGTGTTCACATCTCAAATGAAGGCGTTCCTTCGGCCGTGATTGGCATTTGTTCAAGATACATCCAT
ACATCTGCTTCCATTATCCACGTTGATGACTACCTTGCTGCAAAAGAATTGCTGATCAAGCTTGTCAAAGCTTGCGACAG
TTCTGCCGTCCAGTCGATTTTGCGAAATGAGTGA

Upstream 100 bases:

>100_bases
ACAGAACATGTCCGTCCGTGTTAAGGATGGGCTCTCTTCTGGAAACACATCGCACACTTATGTAAAATGTAGAGAGATAC
ATAAGAAAAGAGGGAAACAG

Downstream 100 bases:

>100_bases
ACAAAGAAACCCTGTGCTGCTTAACGCCCAGGGTTTCTTTTTGGAAAAACAACTACCGGCTTTCAAATACGTATGACAAC
GATTTAATTGCCTGATTTAC

Product: YtoP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNQETRTLFQTLTELPGAPGNEHLVRRFMKKELEKYADEIIQDRLGSVFGVKHGPEGSPKIMVAGHMDEVGFMVTSITDN
GLLRFQTLGGWWSQVLLAQRVEIHTDNGPIPGVIASTPPHLLTDEQRRRPMDIKNMMIDIGADDREDAERIGVKPGQQIV
PICPFTPMANEKKILAKAWDNRYGCGLSIELLKELQGTELPNNLYSGATVQEELGTRGAQTAANMIQPDLFFALDASPAN
DSSGDKNQFGQLGKGVLLRIFDRTMVMDSEMRNFVLDTAETNDIPYQYFVSPGGTDAGRVHISNEGVPSAVIGICSRYIH
TSASIIHVDDYLAAKELLIKLVKACDSSAVQSILRNE

Sequences:

>Translated_357_residues
MNQETRTLFQTLTELPGAPGNEHLVRRFMKKELEKYADEIIQDRLGSVFGVKHGPEGSPKIMVAGHMDEVGFMVTSITDN
GLLRFQTLGGWWSQVLLAQRVEIHTDNGPIPGVIASTPPHLLTDEQRRRPMDIKNMMIDIGADDREDAERIGVKPGQQIV
PICPFTPMANEKKILAKAWDNRYGCGLSIELLKELQGTELPNNLYSGATVQEELGTRGAQTAANMIQPDLFFALDASPAN
DSSGDKNQFGQLGKGVLLRIFDRTMVMDSEMRNFVLDTAETNDIPYQYFVSPGGTDAGRVHISNEGVPSAVIGICSRYIH
TSASIIHVDDYLAAKELLIKLVKACDSSAVQSILRNE
>Mature_357_residues
MNQETRTLFQTLTELPGAPGNEHLVRRFMKKELEKYADEIIQDRLGSVFGVKHGPEGSPKIMVAGHMDEVGFMVTSITDN
GLLRFQTLGGWWSQVLLAQRVEIHTDNGPIPGVIASTPPHLLTDEQRRRPMDIKNMMIDIGADDREDAERIGVKPGQQIV
PICPFTPMANEKKILAKAWDNRYGCGLSIELLKELQGTELPNNLYSGATVQEELGTRGAQTAANMIQPDLFFALDASPAN
DSSGDKNQFGQLGKGVLLRIFDRTMVMDSEMRNFVLDTAETNDIPYQYFVSPGGTDAGRVHISNEGVPSAVIGICSRYIH
TSASIIHVDDYLAAKELLIKLVKACDSSAVQSILRNE

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=341, Percent_Identity=40.4692082111437, Blast_Score=235, Evalue=3e-63,
Organism=Escherichia coli, GI1788727, Length=341, Percent_Identity=31.9648093841642, Blast_Score=171, Evalue=7e-44,
Organism=Escherichia coli, GI87082417, Length=347, Percent_Identity=29.6829971181556, Blast_Score=152, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 39353; Mature: 39353

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQETRTLFQTLTELPGAPGNEHLVRRFMKKELEKYADEIIQDRLGSVFGVKHGPEGSPK
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
IMVAGHMDEVGFMVTSITDNGLLRFQTLGGWWSQVLLAQRVEIHTDNGPIPGVIASTPPH
EEEEECCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCC
LLTDEQRRRPMDIKNMMIDIGADDREDAERIGVKPGQQIVPICPFTPMANEKKILAKAWD
CCCCHHHCCCCCHHHHEEECCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHCC
NRYGCGLSIELLKELQGTELPNNLYSGATVQEELGTRGAQTAANMIQPDLFFALDASPAN
CCCCCCCHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHCCCCEEEEEECCCCC
DSSGDKNQFGQLGKGVLLRIFDRTMVMDSEMRNFVLDTAETNDIPYQYFVSPGGTDAGRV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCEE
HISNEGVPSAVIGICSRYIHTSASIIHVDDYLAAKELLIKLVKACDSSAVQSILRNE
EECCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MNQETRTLFQTLTELPGAPGNEHLVRRFMKKELEKYADEIIQDRLGSVFGVKHGPEGSPK
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
IMVAGHMDEVGFMVTSITDNGLLRFQTLGGWWSQVLLAQRVEIHTDNGPIPGVIASTPPH
EEEEECCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCC
LLTDEQRRRPMDIKNMMIDIGADDREDAERIGVKPGQQIVPICPFTPMANEKKILAKAWD
CCCCHHHCCCCCHHHHEEECCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHCC
NRYGCGLSIELLKELQGTELPNNLYSGATVQEELGTRGAQTAANMIQPDLFFALDASPAN
CCCCCCCHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHCCCCEEEEEECCCCC
DSSGDKNQFGQLGKGVLLRIFDRTMVMDSEMRNFVLDTAETNDIPYQYFVSPGGTDAGRV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCEE
HISNEGVPSAVIGICSRYIHTSASIIHVDDYLAAKELLIKLVKACDSSAVQSILRNE
EECCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]