| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is yliA [C]
Identifier: 52786549
GI number: 52786549
Start: 2698595
End: 2699413
Strand: Direct
Name: yliA [C]
Synonym: BLi02814
Alternate gene names: 52786549
Gene position: 2698595-2699413 (Clockwise)
Preceding gene: 52786548
Following gene: 52786550
Centisome position: 63.91
GC content: 44.2
Gene sequence:
>819_bases TTGGGAACAGAACAATCAACGGTGCTTCGAGTCAGAGATTTGCATGTACAGGTTAACAACCAAAAAGGACATTCAACCCT TGTGCAAGACATCAATTTTGATTTGAAGCGCGGCCAAGTCCTTGGTCTGATTGGTGAGAGCGGTTGCGGAAAAACGGTAA CAAGCATGTCTATTCTTCAGACGCTTGATCCAAAAACAACTAAGGTGGAAGGAAGTATTGCATTGCGAGGCCGTGAATTG AACGGATTAGCAGATAAGGAAATGCGTAAAATCCGCGGCAAAGATATTGCCTATATCATGCAAAATCCGATGAACGCTTT TACACCCGTTTTTACGATAGGACAGCAAATGACCGAATCGATTCGCTCTCATACATCTTTTAGCAAGAAACAGGCGAAAG AGCTTGCGACCGAAGCATTGCATCATGTGAACCTACCCCACCCTGCTAAACTTTTACATTCTTATCCTTTTCAATTAAGC GGCGGAATGCTTCAACGGGTCATGATTGCAATTGCATCATGCTTAAAGCCTGCCATTCTCATCGCGGATGAGCCTACCAC TGCGCTCGACGTGTATAATCAGAAGACGGTGCTGAAATATTTAGACGGCATGCGTTCTGACTTCGGCACGGCGATTTTGC TTATATCTCATGACCTCGGCGTTATTGCTGAAATGGCGGATGAAGTTGCTGTGATGCAGAATGGGAGAATTGTAGAAAAT AGAGATGTGTTTCAGCTGTTTGATGAACCAAAGCATGAATATACTAAGAAGCTATTAAGTGCACGGTTGACATTGCCGGT GGATCAACTTGCGACTTGA
Upstream 100 bases:
>100_bases GGTGATGATCATGATTGTGGTTGTGACATTCAATTTATTGGGCGAAGCCTTATCAGATCAATACGGTGTCAAACGTCGAT TTTAAAAAGGAATGAGGAAG
Downstream 100 bases:
>100_bases GTCAGTATGAGGAAGGCCGGCATTTGAGATGGGGTGAACAAGTGAGTTTATTACAAGTGAAAGAAGTCACTCATCATTAT ACAGCGCGCAAATTATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MGTEQSTVLRVRDLHVQVNNQKGHSTLVQDINFDLKRGQVLGLIGESGCGKTVTSMSILQTLDPKTTKVEGSIALRGREL NGLADKEMRKIRGKDIAYIMQNPMNAFTPVFTIGQQMTESIRSHTSFSKKQAKELATEALHHVNLPHPAKLLHSYPFQLS GGMLQRVMIAIASCLKPAILIADEPTTALDVYNQKTVLKYLDGMRSDFGTAILLISHDLGVIAEMADEVAVMQNGRIVEN RDVFQLFDEPKHEYTKKLLSARLTLPVDQLAT
Sequences:
>Translated_272_residues MGTEQSTVLRVRDLHVQVNNQKGHSTLVQDINFDLKRGQVLGLIGESGCGKTVTSMSILQTLDPKTTKVEGSIALRGREL NGLADKEMRKIRGKDIAYIMQNPMNAFTPVFTIGQQMTESIRSHTSFSKKQAKELATEALHHVNLPHPAKLLHSYPFQLS GGMLQRVMIAIASCLKPAILIADEPTTALDVYNQKTVLKYLDGMRSDFGTAILLISHDLGVIAEMADEVAVMQNGRIVEN RDVFQLFDEPKHEYTKKLLSARLTLPVDQLAT >Mature_271_residues GTEQSTVLRVRDLHVQVNNQKGHSTLVQDINFDLKRGQVLGLIGESGCGKTVTSMSILQTLDPKTTKVEGSIALRGRELN GLADKEMRKIRGKDIAYIMQNPMNAFTPVFTIGQQMTESIRSHTSFSKKQAKELATEALHHVNLPHPAKLLHSYPFQLSG GMLQRVMIAIASCLKPAILIADEPTTALDVYNQKTVLKYLDGMRSDFGTAILLISHDLGVIAEMADEVAVMQNGRIVENR DVFQLFDEPKHEYTKKLLSARLTLPVDQLAT
Specific function: Probably part of a binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for energy coupling to the transport system [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9961252, Length=222, Percent_Identity=31.0810810810811, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI4505771, Length=222, Percent_Identity=31.0810810810811, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI42741659, Length=220, Percent_Identity=31.3636363636364, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI9961250, Length=232, Percent_Identity=30.1724137931034, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI156105685, Length=229, Percent_Identity=30.1310043668122, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI148612844, Length=234, Percent_Identity=31.6239316239316, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI255708477, Length=234, Percent_Identity=31.6239316239316, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI171184400, Length=242, Percent_Identity=27.6859504132231, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI215820660, Length=218, Percent_Identity=28.4403669724771, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI20143975, Length=218, Percent_Identity=28.4403669724771, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI21536378, Length=222, Percent_Identity=30.1801801801802, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI21536376, Length=218, Percent_Identity=27.0642201834862, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI46592964, Length=245, Percent_Identity=27.3469387755102, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI46592956, Length=245, Percent_Identity=27.3469387755102, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI46592971, Length=245, Percent_Identity=27.3469387755102, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI46592915, Length=245, Percent_Identity=27.3469387755102, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI46592898, Length=245, Percent_Identity=27.3469387755102, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI46592978, Length=245, Percent_Identity=27.3469387755102, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI153792144, Length=232, Percent_Identity=26.2931034482759, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI145693107, Length=261, Percent_Identity=41.7624521072797, Blast_Score=211, Evalue=3e-56, Organism=Escherichia coli, GI48994883, Length=258, Percent_Identity=39.5348837209302, Blast_Score=201, Evalue=5e-53, Organism=Escherichia coli, GI1789963, Length=255, Percent_Identity=38.8235294117647, Blast_Score=198, Evalue=3e-52, Organism=Escherichia coli, GI1787759, Length=255, Percent_Identity=39.2156862745098, Blast_Score=194, Evalue=4e-51, Organism=Escherichia coli, GI1788506, Length=256, Percent_Identity=40.234375, Blast_Score=193, Evalue=1e-50, Organism=Escherichia coli, GI1789890, Length=246, Percent_Identity=40.650406504065, Blast_Score=176, Evalue=1e-45, Organism=Escherichia coli, GI1787500, Length=267, Percent_Identity=33.3333333333333, Blast_Score=149, Evalue=1e-37, Organism=Escherichia coli, GI1789962, Length=233, Percent_Identity=38.1974248927039, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1787548, Length=259, Percent_Identity=30.1158301158301, Blast_Score=134, Evalue=7e-33, Organism=Escherichia coli, GI48994997, Length=234, Percent_Identity=31.1965811965812, Blast_Score=130, Evalue=9e-32, Organism=Escherichia coli, GI1787758, Length=262, Percent_Identity=30.5343511450382, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1789891, Length=229, Percent_Identity=34.061135371179, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1789672, Length=245, Percent_Identity=33.0612244897959, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1786398, Length=242, Percent_Identity=31.404958677686, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1789032, Length=250, Percent_Identity=28.8, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1787547, Length=260, Percent_Identity=26.5384615384615, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1787089, Length=247, Percent_Identity=29.9595141700405, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788225, Length=249, Percent_Identity=30.9236947791165, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788761, Length=249, Percent_Identity=29.718875502008, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790162, Length=258, Percent_Identity=26.7441860465116, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787029, Length=242, Percent_Identity=28.099173553719, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786703, Length=239, Percent_Identity=29.7071129707113, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=29.4930875576037, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87081709, Length=249, Percent_Identity=26.9076305220884, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1790525, Length=226, Percent_Identity=33.1858407079646, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788450, Length=237, Percent_Identity=25.3164556962025, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786872, Length=245, Percent_Identity=30.2040816326531, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1786563, Length=223, Percent_Identity=30.9417040358744, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1787105, Length=216, Percent_Identity=30.5555555555556, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787712, Length=238, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1787370, Length=229, Percent_Identity=26.2008733624454, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI87081791, Length=261, Percent_Identity=24.904214559387, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1788644, Length=201, Percent_Identity=28.8557213930348, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786803, Length=220, Percent_Identity=28.1818181818182, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790190, Length=237, Percent_Identity=26.1603375527426, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788165, Length=213, Percent_Identity=29.1079812206573, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1787792, Length=215, Percent_Identity=31.6279069767442, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786319, Length=231, Percent_Identity=26.8398268398268, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790467, Length=261, Percent_Identity=24.1379310344828, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789991, Length=222, Percent_Identity=26.5765765765766, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786345, Length=238, Percent_Identity=26.4705882352941, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789873, Length=224, Percent_Identity=27.2321428571429, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789586, Length=221, Percent_Identity=23.9819004524887, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI87082267, Length=248, Percent_Identity=23.7903225806452, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1790544, Length=255, Percent_Identity=25.0980392156863, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790739, Length=234, Percent_Identity=23.9316239316239, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787143, Length=218, Percent_Identity=29.8165137614679, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI48995001, Length=266, Percent_Identity=24.812030075188, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787113, Length=226, Percent_Identity=27.4336283185841, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1786654, Length=218, Percent_Identity=28.8990825688073, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787972, Length=242, Percent_Identity=23.9669421487603, Blast_Score=61, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17541710, Length=234, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17569143, Length=232, Percent_Identity=29.3103448275862, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17558664, Length=220, Percent_Identity=32.7272727272727, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17569145, Length=217, Percent_Identity=29.4930875576037, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193202349, Length=237, Percent_Identity=27.4261603375527, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115534520, Length=235, Percent_Identity=27.2340425531915, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI115533592, Length=265, Percent_Identity=27.9245283018868, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193211017, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193208177, Length=245, Percent_Identity=24.8979591836735, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193211015, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71996809, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI212646699, Length=229, Percent_Identity=27.9475982532751, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25146777, Length=218, Percent_Identity=29.3577981651376, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71984940, Length=220, Percent_Identity=28.6363636363636, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115535101, Length=221, Percent_Identity=28.5067873303167, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71992290, Length=238, Percent_Identity=26.890756302521, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI86563255, Length=224, Percent_Identity=26.3392857142857, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17567265, Length=216, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=9e-11, Organism=Caenorhabditis elegans, GI115533608, Length=205, Percent_Identity=30.2439024390244, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=253, Percent_Identity=24.1106719367589, Blast_Score=72, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6319856, Length=226, Percent_Identity=27.8761061946903, Blast_Score=70, Evalue=5e-13, Organism=Drosophila melanogaster, GI23397593, Length=228, Percent_Identity=30.2631578947368, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI17136662, Length=216, Percent_Identity=31.9444444444444, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24659289, Length=219, Percent_Identity=29.6803652968037, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24641565, Length=222, Percent_Identity=30.6306306306306, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI281363262, Length=223, Percent_Identity=30.0448430493274, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24653245, Length=223, Percent_Identity=30.0448430493274, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI85726357, Length=234, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI85724864, Length=235, Percent_Identity=27.2340425531915, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24580555, Length=235, Percent_Identity=27.2340425531915, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85816269, Length=235, Percent_Identity=27.2340425531915, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24580553, Length=235, Percent_Identity=27.2340425531915, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI17647959, Length=244, Percent_Identity=28.6885245901639, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 30150; Mature: 30019
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTEQSTVLRVRDLHVQVNNQKGHSTLVQDINFDLKRGQVLGLIGESGCGKTVTSMSILQ CCCCCHHEEEEEEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHH TLDPKTTKVEGSIALRGRELNGLADKEMRKIRGKDIAYIMQNPMNAFTPVFTIGQQMTES HCCCCCEEECCEEEEECCCCCCCHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHHHHHHHH IRSHTSFSKKQAKELATEALHHVNLPHPAKLLHSYPFQLSGGMLQRVMIAIASCLKPAIL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEE IADEPTTALDVYNQKTVLKYLDGMRSDFGTAILLISHDLGVIAEMADEVAVMQNGRIVEN EECCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEECC RDVFQLFDEPKHEYTKKLLSARLTLPVDQLAT CHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure GTEQSTVLRVRDLHVQVNNQKGHSTLVQDINFDLKRGQVLGLIGESGCGKTVTSMSILQ CCCCHHEEEEEEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHH TLDPKTTKVEGSIALRGRELNGLADKEMRKIRGKDIAYIMQNPMNAFTPVFTIGQQMTES HCCCCCEEECCEEEEECCCCCCCHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHHHHHHHH IRSHTSFSKKQAKELATEALHHVNLPHPAKLLHSYPFQLSGGMLQRVMIAIASCLKPAIL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEE IADEPTTALDVYNQKTVLKYLDGMRSDFGTAILLISHDLGVIAEMADEVAVMQNGRIVEN EECCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEECC RDVFQLFDEPKHEYTKKLLSARLTLPVDQLAT CHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]