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The map label for this gene is dppC [H]

Identifier: 52786548

GI number: 52786548

Start: 2697746

End: 2698579

Strand: Direct

Name: dppC [H]

Synonym: BLi02813

Alternate gene names: 52786548

Gene position: 2697746-2698579 (Clockwise)

Preceding gene: 52786547

Following gene: 52786549

Centisome position: 63.89

GC content: 46.04

Gene sequence:

>834_bases
ATGATGATAAGTATACGCAGGATATTCAAAGGCCAAAAAGTGATTACGGTATGCACCACTATATTAACCATCCTTTTTAT
TATCGCTGTATTCGCCCCTTGGATTGCGCCGCACCATCCTGCTGATGTCCATATGGTATATAAGCTGCAGCCTCCATCCT
GGGAATTTCCTTTAGGAACTGATCATCTGGGAAGATGCAACTTATCCCGCCTTTTGTACGGCGCCCGGATTTCTTTGGGA
TTCGCGATGCTTATTTTCATTTCCTCCCTCGTTATCGGCCTCATTGTCGGGACGATTTCAGGGTATAAAGGCGGCTGGAT
TGACCAGCTGTTAATGAGATGCTGCGATGGTGTAATGGCCTTTCCGAACTTAATTTTAGTTCTTGGCCTCGTGGGCATTT
TCGGCCCCGGACTTCCTCAAGTCATTCTGGCCCTCATGCTTGTGCAATGGGTCTATTATGCGAGAATTTTCAGAGGAATG
GTGCTGAGTCTGAAAGAGGAGAACTTTATTGCGGCGGCAAAAATCAATGGATCTTCACAATGGAAAATCATTAAAAATCA
TATCATCCCTAATGTCCTCCCTCCCCTCGTCGTCATCGGTACGTTGGAAATGGGCTGGGCCATTATGGATATCTCGGCTA
TGTCTTTTCTCGGCTTGGGCGTCCAGCCCCCGGCGGCTGAATGGGGAGCGATGATTCATGAAGGTAAATCGTATATTCGG
TCGAATCCCGAGTTAATGATTTATCCAGGGGTGATGATCATGATTGTGGTTGTGACATTCAATTTATTGGGCGAAGCCTT
ATCAGATCAATACGGTGTCAAACGTCGATTTTAA

Upstream 100 bases:

>100_bases
TGTTCTTAGCCGCTACCTTTTTTATATTGAGCAACTTAATTGTTGATCTCATTCAAATGTATATTGACCCGCGCATTTCA
AGGAAAGAAGGGCAGCATCG

Downstream 100 bases:

>100_bases
AAAGGAATGAGGAAGTTGGGAACAGAACAATCAACGGTGCTTCGAGTCAGAGATTTGCATGTACAGGTTAACAACCAAAA
AGGACATTCAACCCTTGTGC

Product: hypothetical protein

Products: Ni2; [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MMISIRRIFKGQKVITVCTTILTILFIIAVFAPWIAPHHPADVHMVYKLQPPSWEFPLGTDHLGRCNLSRLLYGARISLG
FAMLIFISSLVIGLIVGTISGYKGGWIDQLLMRCCDGVMAFPNLILVLGLVGIFGPGLPQVILALMLVQWVYYARIFRGM
VLSLKEENFIAAAKINGSSQWKIIKNHIIPNVLPPLVVIGTLEMGWAIMDISAMSFLGLGVQPPAAEWGAMIHEGKSYIR
SNPELMIYPGVMIMIVVVTFNLLGEALSDQYGVKRRF

Sequences:

>Translated_277_residues
MMISIRRIFKGQKVITVCTTILTILFIIAVFAPWIAPHHPADVHMVYKLQPPSWEFPLGTDHLGRCNLSRLLYGARISLG
FAMLIFISSLVIGLIVGTISGYKGGWIDQLLMRCCDGVMAFPNLILVLGLVGIFGPGLPQVILALMLVQWVYYARIFRGM
VLSLKEENFIAAAKINGSSQWKIIKNHIIPNVLPPLVVIGTLEMGWAIMDISAMSFLGLGVQPPAAEWGAMIHEGKSYIR
SNPELMIYPGVMIMIVVVTFNLLGEALSDQYGVKRRF
>Mature_277_residues
MMISIRRIFKGQKVITVCTTILTILFIIAVFAPWIAPHHPADVHMVYKLQPPSWEFPLGTDHLGRCNLSRLLYGARISLG
FAMLIFISSLVIGLIVGTISGYKGGWIDQLLMRCCDGVMAFPNLILVLGLVGIFGPGLPQVILALMLVQWVYYARIFRGM
VLSLKEENFIAAAKINGSSQWKIIKNHIIPNVLPPLVVIGTLEMGWAIMDISAMSFLGLGVQPPAAEWGAMIHEGKSYIR
SNPELMIYPGVMIMIVVVTFNLLGEALSDQYGVKRRF

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789889, Length=239, Percent_Identity=40.1673640167364, Blast_Score=190, Evalue=9e-50,
Organism=Escherichia coli, GI1787054, Length=269, Percent_Identity=36.0594795539033, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1787760, Length=262, Percent_Identity=34.7328244274809, Blast_Score=188, Evalue=4e-49,
Organism=Escherichia coli, GI1789964, Length=274, Percent_Identity=39.051094890511, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI1787549, Length=257, Percent_Identity=35.408560311284, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1787498, Length=273, Percent_Identity=33.3333333333333, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=27.4336283185841, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30699; Mature: 30699

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMISIRRIFKGQKVITVCTTILTILFIIAVFAPWIAPHHPADVHMVYKLQPPSWEFPLGT
CEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCC
DHLGRCNLSRLLYGARISLGFAMLIFISSLVIGLIVGTISGYKGGWIDQLLMRCCDGVMA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
FPNLILVLGLVGIFGPGLPQVILALMLVQWVYYARIFRGMVLSLKEENFIAAAKINGSSQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
WKIIKNHIIPNVLPPLVVIGTLEMGWAIMDISAMSFLGLGVQPPAAEWGAMIHEGKSYIR
HHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
SNPELMIYPGVMIMIVVVTFNLLGEALSDQYGVKRRF
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMISIRRIFKGQKVITVCTTILTILFIIAVFAPWIAPHHPADVHMVYKLQPPSWEFPLGT
CEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCC
DHLGRCNLSRLLYGARISLGFAMLIFISSLVIGLIVGTISGYKGGWIDQLLMRCCDGVMA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
FPNLILVLGLVGIFGPGLPQVILALMLVQWVYYARIFRGMVLSLKEENFIAAAKINGSSQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
WKIIKNHIIPNVLPPLVVIGTLEMGWAIMDISAMSFLGLGVQPPAAEWGAMIHEGKSYIR
HHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
SNPELMIYPGVMIMIVVVTFNLLGEALSDQYGVKRRF
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ni2; [Periplasm]; ATP; H2O [C]

Specific reaction: Ni2+ [Periplasm] + ATP + H2O = Ni2+ [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]