Click here to switch to the map view.

The map label for this gene is yddH [C]

Identifier: 52786518

GI number: 52786518

Start: 2672384

End: 2672953

Strand: Reverse

Name: yddH [C]

Synonym: BLi02783

Alternate gene names: 52786518

Gene position: 2672953-2672384 (Counterclockwise)

Preceding gene: 52786519

Following gene: 52786516

Centisome position: 63.3

GC content: 41.23

Gene sequence:

>570_bases
ATGAGAGCACCGATTGATGAACCCATTTGGTACGCCTATCCCGGCATGGTAGCTGTCGTTACGGCTCAATATGAAGGTGA
AAAAAACGCCATGGCCTCCGGGTGGCATACGTATATCGGATCTTCTCCCGGAATGTATGGGATATCGTTAAATAATGAGA
CATTTACTTACAAATTGATTGAGAAAAGTGGCGTTTTCGGTGTGAATTTTCTTCCGGGGAGATGCTCGGAATTAATTCAA
GCATTAGGCACCCACAGCGGCAGAGATATCAATAAGTTTGAAGCATTTCATATTCAATACGAAGAAGGGCTAAAAGCCGA
GGTACCGATTTTAACTGATGCATATTTTGCTTATGAGTGTAAAGTACACAGTATTTCCACTTTGGGCGATCAAGAGTGGA
TTGCGGGAGAAGTTTTACAGAGATATCAAGATAAAGAGCTTTTCTTAAAAAAAGGCATGCCGAATTTAGAAAAATTGGAT
GTTCCGCTTCATATTGGAGGGTCCAGCTATCGCATATTAAATAGTCAAGCAGAGGAACATCAACACGCATTTAATTCCGA
AGCTGATTGA

Upstream 100 bases:

>100_bases
CTTGCAGCTAAAACGAACGGTCCTTTTGACGAGAACATGTCGATCCAGATGCGAGCCTCTCAAATTTTAATAAAAAATGA
ATCTAAAAGGAGCGGTGGAG

Downstream 100 bases:

>100_bases
CATATTCAGGTTTCTCCACATTCACTCGAGCAGGGGAAGCCAATCAATGGATGTATGTCCACTGGATTCGCGCTGGAAAT
CCATTGACTTTATACTAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Flavoredoxin; Flavin Reductase Like Domain Protein; Flavin Reductase; Flavinredoxin; Oxidoreductase; Flavin Reductase-Like Protein; Flavin Reductase Domain Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRAPIDEPIWYAYPGMVAVVTAQYEGEKNAMASGWHTYIGSSPGMYGISLNNETFTYKLIEKSGVFGVNFLPGRCSELIQ
ALGTHSGRDINKFEAFHIQYEEGLKAEVPILTDAYFAYECKVHSISTLGDQEWIAGEVLQRYQDKELFLKKGMPNLEKLD
VPLHIGGSSYRILNSQAEEHQHAFNSEAD

Sequences:

>Translated_189_residues
MRAPIDEPIWYAYPGMVAVVTAQYEGEKNAMASGWHTYIGSSPGMYGISLNNETFTYKLIEKSGVFGVNFLPGRCSELIQ
ALGTHSGRDINKFEAFHIQYEEGLKAEVPILTDAYFAYECKVHSISTLGDQEWIAGEVLQRYQDKELFLKKGMPNLEKLD
VPLHIGGSSYRILNSQAEEHQHAFNSEAD
>Mature_189_residues
MRAPIDEPIWYAYPGMVAVVTAQYEGEKNAMASGWHTYIGSSPGMYGISLNNETFTYKLIEKSGVFGVNFLPGRCSELIQ
ALGTHSGRDINKFEAFHIQYEEGLKAEVPILTDAYFAYECKVHSISTLGDQEWIAGEVLQRYQDKELFLKKGMPNLEKLD
VPLHIGGSSYRILNSQAEEHQHAFNSEAD

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21215; Mature: 21215

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPIDEPIWYAYPGMVAVVTAQYEGEKNAMASGWHTYIGSSPGMYGISLNNETFTYKLI
CCCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCCHHCCCCCCCEEEEEECCCEEEEEEE
EKSGVFGVNFLPGRCSELIQALGTHSGRDINKFEAFHIQYEEGLKAEVPILTDAYFAYEC
ECCCCEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCEEEEEE
KVHSISTLGDQEWIAGEVLQRYQDKELFLKKGMPNLEKLDVPLHIGGSSYRILNSQAEEH
EEEEECCCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHCCCEEEECCCCEEEECCHHHHH
QHAFNSEAD
HHHCCCCCC
>Mature Secondary Structure
MRAPIDEPIWYAYPGMVAVVTAQYEGEKNAMASGWHTYIGSSPGMYGISLNNETFTYKLI
CCCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCCHHCCCCCCCEEEEEECCCEEEEEEE
EKSGVFGVNFLPGRCSELIQALGTHSGRDINKFEAFHIQYEEGLKAEVPILTDAYFAYEC
ECCCCEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCEEEEEE
KVHSISTLGDQEWIAGEVLQRYQDKELFLKKGMPNLEKLDVPLHIGGSSYRILNSQAEEH
EEEEECCCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHCCCEEEECCCCEEEECCHHHHH
QHAFNSEAD
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA