Click here to switch to the map view.

The map label for this gene is yrhD [H]

Identifier: 52786502

GI number: 52786502

Start: 2661548

End: 2662027

Strand: Direct

Name: yrhD [H]

Synonym: BLi02767

Alternate gene names: 52786502

Gene position: 2661548-2662027 (Clockwise)

Preceding gene: 52786501

Following gene: 52786504

Centisome position: 63.03

GC content: 51.04

Gene sequence:

>480_bases
ATGGCAGCTCCCATCACCGCCATCCGCAAAGAAGAAAAATCTGAGGAGCAAATAAAGCTTGAAAAACTCGAAGAACTCAA
AGCCCTTTTGGCTGAACAGGAAGCCGCCGTTTCAAAAACGATGAAGCTTCTCGGCGAACTGAACGGCCTCGGGATCCTTG
ATGCCGCAGACAGCATGATCGGCGCGAAGGAAGACATCGCCAAAATCGTCCTCGGCCAGCTGTCCAAAGAGCCGGCCAAA
AACCTGATGAATACAGCCATTGCAGCAGGCGGCGCTCTCTCCAAAGCCGAACCGGAAGTCATGGGGAAACTTGTAGAAAG
CATCGTCGCCGGCACAAAACAAGGAGAGGACTTTTTAAAAAGCGATAAAAAAACCGGAGTCCTCGATCTGCTGAAAGCCA
TGAACGATCCGGACATCAACCGGGCCGTCGGCTTCGGCCTGCAATTTTTAAAAGGCATGGGAAAAGCGCTGAAAGAATAA

Upstream 100 bases:

>100_bases
TAAGAAACGCCATCCGCAAAACGGGGCTGAAGTCGAGCGGAAATGGAAGCGTCCGGGGTACGTTCATTTAACAGACTAAA
TCAAAAGGAGGTCATCACAC

Downstream 100 bases:

>100_bases
CAAATAAGAAAACCGGCTCACCACTTTGAGCCGGTTTTCCTATTGGCGATAGAAGCACCGTCGCTTTCTGTCGCCTCATT
TGCTGTGTGTTTCATCTTTT

Product: YrhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAAPITAIRKEEKSEEQIKLEKLEELKALLAEQEAAVSKTMKLLGELNGLGILDAADSMIGAKEDIAKIVLGQLSKEPAK
NLMNTAIAAGGALSKAEPEVMGKLVESIVAGTKQGEDFLKSDKKTGVLDLLKAMNDPDINRAVGFGLQFLKGMGKALKE

Sequences:

>Translated_159_residues
MAAPITAIRKEEKSEEQIKLEKLEELKALLAEQEAAVSKTMKLLGELNGLGILDAADSMIGAKEDIAKIVLGQLSKEPAK
NLMNTAIAAGGALSKAEPEVMGKLVESIVAGTKQGEDFLKSDKKTGVLDLLKAMNDPDINRAVGFGLQFLKGMGKALKE
>Mature_158_residues
AAPITAIRKEEKSEEQIKLEKLEELKALLAEQEAAVSKTMKLLGELNGLGILDAADSMIGAKEDIAKIVLGQLSKEPAKN
LMNTAIAAGGALSKAEPEVMGKLVESIVAGTKQGEDFLKSDKKTGVLDLLKAMNDPDINRAVGFGLQFLKGMGKALKE

Specific function: Unknown

COG id: COG2427

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.fulgidus AF1717 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012440 [H]

Pfam domain/function: PF07849 DUF1641 [H]

EC number: NA

Molecular weight: Translated: 16876; Mature: 16745

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPITAIRKEEKSEEQIKLEKLEELKALLAEQEAAVSKTMKLLGELNGLGILDAADSMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GAKEDIAKIVLGQLSKEPAKNLMNTAIAAGGALSKAEPEVMGKLVESIVAGTKQGEDFLK
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
SDKKTGVLDLLKAMNDPDINRAVGFGLQFLKGMGKALKE
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAPITAIRKEEKSEEQIKLEKLEELKALLAEQEAAVSKTMKLLGELNGLGILDAADSMI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GAKEDIAKIVLGQLSKEPAKNLMNTAIAAGGALSKAEPEVMGKLVESIVAGTKQGEDFLK
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
SDKKTGVLDLLKAMNDPDINRAVGFGLQFLKGMGKALKE
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]