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The map label for this gene is yneF

Identifier: 52785792

GI number: 52785792

Start: 1981676

End: 1981894

Strand: Direct

Name: yneF

Synonym: BLi02038

Alternate gene names: NA

Gene position: 1981676-1981894 (Clockwise)

Preceding gene: 52785791

Following gene: 52785794

Centisome position: 46.93

GC content: 36.99

Gene sequence:

>219_bases
ATGGATTTGTGGGTTGTCATCCTAGTGGGCGTTTTAGCATTGCTCGCAGGTGTTGCACTCGGATTTTTTATTGCTCGTAA
ATATATGATGAACTATTTGAAAAAAAATCCGCCAATTAATGAACAAATGCTGCGCATGATGATGATGCAGATGGGTATGA
AACCATCCCAGAAGAAAATTAATCAAATGATGAAAGCCATGGAAAATCAAACGAAATAA

Upstream 100 bases:

>100_bases
AAGAAATTTTGTATAAAAAAAAGAATTTGGACTGTAAATGTTGTATAATAGCGTTTGGTTTAGTACACTTTATACGAGAC
AACATGAAGGAGGAAATTAA

Downstream 100 bases:

>100_bases
TGCGAATGCGATTATGACATAGAAGGAACATGGTTATAAAATAAAAAACCCGCTTCCGGGTTTTTTATTTTGATCTATGA
TTATTGTGTATTTCCGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MDLWVVILVGVLALLAGVALGFFIARKYMMNYLKKNPPINEQMLRMMMMQMGMKPSQKKINQMMKAMENQTK

Sequences:

>Translated_72_residues
MDLWVVILVGVLALLAGVALGFFIARKYMMNYLKKNPPINEQMLRMMMMQMGMKPSQKKINQMMKAMENQTK
>Mature_72_residues
MDLWVVILVGVLALLAGVALGFFIARKYMMNYLKKNPPINEQMLRMMMMQMGMKPSQKKINQMMKAMENQTK

Specific function: Unknown

COG id: COG3763

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0154 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011992
- InterPro:   IPR005359
- ProDom:   PD048972 [H]

Pfam domain/function: PF03672 UPF0154 [H]

EC number: NA

Molecular weight: Translated: 8370; Mature: 8370

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
18.1 %Met     (Translated Protein)
18.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
18.1 %Met     (Mature Protein)
18.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLWVVILVGVLALLAGVALGFFIARKYMMNYLKKNPPINEQMLRMMMMQMGMKPSQKKI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHH
NQMMKAMENQTK
HHHHHHHHHCCC
>Mature Secondary Structure
MDLWVVILVGVLALLAGVALGFFIARKYMMNYLKKNPPINEQMLRMMMMQMGMKPSQKKI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHH
NQMMKAMENQTK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]