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The map label for this gene is ydfN [H]

Identifier: 52785778

GI number: 52785778

Start: 1969716

End: 1970339

Strand: Direct

Name: ydfN [H]

Synonym: BLi02023

Alternate gene names: 52785778

Gene position: 1969716-1970339 (Clockwise)

Preceding gene: 52785777

Following gene: 52785779

Centisome position: 46.65

GC content: 36.86

Gene sequence:

>624_bases
ATGACCGAATTTCTAGAGTTAGTAAAAGAAAGACGATCAGCAAGTAATTTTCTTCCTGGATATTCAATTTCTGAACAGGA
GCTTAATGAAATATTTGAAATTGTAAAATTGGCTCCCTCTGCTTTTAATTTGCAGCATACAAACTATATTGCGGTGTTGG
ATAAAGAAAAGAAGAACATGTTGCATGAAGCAGCTAATGGCCAATACAAGATCCTAAGCTCGTCGGCAGTCATCATCGTT
TTGGGTGACAAAAAGGCCTTTCATCAAGCAAAAGAAATCTACGAAGGTTTAAAACTGCTCGGAGTACTTAATAAACAAGA
ATATGATGATATGGTTCACGATACGGTTTCTTTCTATCAATCCAGAGGAGAAGCATTTCAAAGGGATGAAGCCATCAGGA
ATGGCTCATTATCTTCTATGCTCTTTATGATGGCTGCTAAAGAAAAAGGTTGGGATACTTGTCCCATGATTGGCTTTGAT
CCTCAAAAGGTAAAAGAGGTATTGAATATAAATGAGCAATATGAGGTCGTCATGATGATCACCCTTGGGAAGGAAAAATT
AGAAAGCAGAAAACCGCGGGGATTTAGAAAACCTGTAAATGAATTTGTAACCTATATCTCTTAA

Upstream 100 bases:

>100_bases
ACTGGGCTTCCATGCCCAAAGCATGTAAATTTTTTTACGACAATATCTCGAATTCGAAATATACGAATTCATAATAAATG
TCGATTGCGAGGTAGTAGTA

Downstream 100 bases:

>100_bases
TAAAGCTATGTTTCATGAAAGAGGAGTGAAATGATATGAAAAAGAAAACAAGCGGAATCCATCACATTACCGCGATTGTC
GGCCATCCGCAAGAGAATGT

Product: YdfN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTEFLELVKERRSASNFLPGYSISEQELNEIFEIVKLAPSAFNLQHTNYIAVLDKEKKNMLHEAANGQYKILSSSAVIIV
LGDKKAFHQAKEIYEGLKLLGVLNKQEYDDMVHDTVSFYQSRGEAFQRDEAIRNGSLSSMLFMMAAKEKGWDTCPMIGFD
PQKVKEVLNINEQYEVVMMITLGKEKLESRKPRGFRKPVNEFVTYIS

Sequences:

>Translated_207_residues
MTEFLELVKERRSASNFLPGYSISEQELNEIFEIVKLAPSAFNLQHTNYIAVLDKEKKNMLHEAANGQYKILSSSAVIIV
LGDKKAFHQAKEIYEGLKLLGVLNKQEYDDMVHDTVSFYQSRGEAFQRDEAIRNGSLSSMLFMMAAKEKGWDTCPMIGFD
PQKVKEVLNINEQYEVVMMITLGKEKLESRKPRGFRKPVNEFVTYIS
>Mature_206_residues
TEFLELVKERRSASNFLPGYSISEQELNEIFEIVKLAPSAFNLQHTNYIAVLDKEKKNMLHEAANGQYKILSSSAVIIVL
GDKKAFHQAKEIYEGLKLLGVLNKQEYDDMVHDTVSFYQSRGEAFQRDEAIRNGSLSSMLFMMAAKEKGWDTCPMIGFDP
QKVKEVLNINEQYEVVMMITLGKEKLESRKPRGFRKPVNEFVTYIS

Specific function: Putative nitroreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 23743; Mature: 23611

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFLELVKERRSASNFLPGYSISEQELNEIFEIVKLAPSAFNLQHTNYIAVLDKEKKNM
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHH
LHEAANGQYKILSSSAVIIVLGDKKAFHQAKEIYEGLKLLGVLNKQEYDDMVHDTVSFYQ
HHHHCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
SRGEAFQRDEAIRNGSLSSMLFMMAAKEKGWDTCPMIGFDPQKVKEVLNINEQYEVVMMI
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEE
TLGKEKLESRKPRGFRKPVNEFVTYIS
ECCHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TEFLELVKERRSASNFLPGYSISEQELNEIFEIVKLAPSAFNLQHTNYIAVLDKEKKNM
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHH
LHEAANGQYKILSSSAVIIVLGDKKAFHQAKEIYEGLKLLGVLNKQEYDDMVHDTVSFYQ
HHHHCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
SRGEAFQRDEAIRNGSLSSMLFMMAAKEKGWDTCPMIGFDPQKVKEVLNINEQYEVVMMI
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEE
TLGKEKLESRKPRGFRKPVNEFVTYIS
ECCHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]