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The map label for this gene is ymfD [H]

Identifier: 52785667

GI number: 52785667

Start: 1868414

End: 1869637

Strand: Direct

Name: ymfD [H]

Synonym: BLi01908

Alternate gene names: 52785667

Gene position: 1868414-1869637 (Clockwise)

Preceding gene: 52785666

Following gene: 52785668

Centisome position: 44.25

GC content: 46.9

Gene sequence:

>1224_bases
TTGAGCAGAAAAAAAGACATGAAAAGCATTTTTGCGCTGTCTTCGGTCCCGCTCGTGATGACGCTCGGCAATTCGATGCT
GATTCCGGTTTTGCCGGTGATCGAAAAAAAATTAAACATTTCTTCGTTTCAGGTGTCGTTGATCATCACGGTTTATTCAA
TTGTGGCGATTGTATGCATCCCGATTACCGGCTATATGTCGGACCGGTTCGGAAGAAAAAAGATCATGCTCCCATGCCTT
CTGATTGCGGGAGCTGGAGGAGCGTTAGCAGGTTTGGCTTCAACTTTTTTCAATGATCCGTTTGCGATGATTTTAGCAGG
TCGCGTCCTTCAAGGAATCGGCTCAGCCGGCGCAGCGCCGATCGTCATGCCGTTTATCGGCGACTTGTTCCAAAATGATG
AAGAAATCAGCGCGGGACTCGGAGATATAGAGACGGCAAATACTGCCGGCAAAGTATTAAGCCCGATATTAGGGGCTTTT
TTAGCATCTTGGGTTTGGTACATGCCGTTTTGGTTTATCCCGGTCGTGTCTCTTGCCAGCTTTTTTCTCGTCTTGTTTTT
TGTTCCCAAACCGAAGGACAAAGATGATGAAAAGCAAACGTTAAAAAACTTTGCAAAAAGCGTACAGGAAATTTTCAAAC
GGGAAGGTCGGTGGCTTGTTTCCACTTTTGTCATCGGCGGAATTATTATGTTTCTTTTATTCGGAGTGCTCTTCTACCTG
TCGGATACTTTGGAGAAGAAGCATCAAATTGACGGGATTGCGAAAGGAGCGCTTCTCAGCATTCCGCTGCTTTTTCTTTC
CGTCAGTTCCTACCTTGCCGGAAAGCTGATCGGAAACGATAAGATCAGAATGAGGATCTGCGTGCTGATCGGCATGATCC
TGCTGGCTTTGTCGTTTGCCGGTTTGTGGTGGAACCACAGCTTTTACCCGTTATTTTTGTTTATGTCCATCGGCGGCATC
GGCATCGGAATTGCGCTCCCTTCTTTGGATGCGCTGATTACCGAGGGAATTGAAAAAGAAGAGCGCGGCACGATATCTTC
GTTTTACAACAGCATGAGGTTTATCGGTGTTGCGCTCGGACCGCCGGTTTTCGCCTATATGATGACAAATGCGGGGTGGC
TGATTTTCATCGTATCGCTTTTGTGCAGTTTAGCTGCACTAGCGCTTGTGCTGTTTAATATTGACCCGAAAGAAGACGAA
AGTGAAGCGGCAAAGACGGTGTAG

Upstream 100 bases:

>100_bases
AGGAGCGTGTTTTTTTTGCCCGCTTGAGCGCCTATACATAAATAAGCCCGCATCATGGAACAATAACAGATGGAAATACT
GATGAATTGGGTGAAAAAAG

Downstream 100 bases:

>100_bases
ATCTGCACCGTCTTTTTCATAAGGTTTTTTAGTTTCCTTAAATCTCCTCCAGTTGATATAATTACAACCATACAGTCCAA
GCGCATATGCTGAAATGTGG

Product: hypothetical protein

Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSRKKDMKSIFALSSVPLVMTLGNSMLIPVLPVIEKKLNISSFQVSLIITVYSIVAIVCIPITGYMSDRFGRKKIMLPCL
LIAGAGGALAGLASTFFNDPFAMILAGRVLQGIGSAGAAPIVMPFIGDLFQNDEEISAGLGDIETANTAGKVLSPILGAF
LASWVWYMPFWFIPVVSLASFFLVLFFVPKPKDKDDEKQTLKNFAKSVQEIFKREGRWLVSTFVIGGIIMFLLFGVLFYL
SDTLEKKHQIDGIAKGALLSIPLLFLSVSSYLAGKLIGNDKIRMRICVLIGMILLALSFAGLWWNHSFYPLFLFMSIGGI
GIGIALPSLDALITEGIEKEERGTISSFYNSMRFIGVALGPPVFAYMMTNAGWLIFIVSLLCSLAALALVLFNIDPKEDE
SEAAKTV

Sequences:

>Translated_407_residues
MSRKKDMKSIFALSSVPLVMTLGNSMLIPVLPVIEKKLNISSFQVSLIITVYSIVAIVCIPITGYMSDRFGRKKIMLPCL
LIAGAGGALAGLASTFFNDPFAMILAGRVLQGIGSAGAAPIVMPFIGDLFQNDEEISAGLGDIETANTAGKVLSPILGAF
LASWVWYMPFWFIPVVSLASFFLVLFFVPKPKDKDDEKQTLKNFAKSVQEIFKREGRWLVSTFVIGGIIMFLLFGVLFYL
SDTLEKKHQIDGIAKGALLSIPLLFLSVSSYLAGKLIGNDKIRMRICVLIGMILLALSFAGLWWNHSFYPLFLFMSIGGI
GIGIALPSLDALITEGIEKEERGTISSFYNSMRFIGVALGPPVFAYMMTNAGWLIFIVSLLCSLAALALVLFNIDPKEDE
SEAAKTV
>Mature_406_residues
SRKKDMKSIFALSSVPLVMTLGNSMLIPVLPVIEKKLNISSFQVSLIITVYSIVAIVCIPITGYMSDRFGRKKIMLPCLL
IAGAGGALAGLASTFFNDPFAMILAGRVLQGIGSAGAAPIVMPFIGDLFQNDEEISAGLGDIETANTAGKVLSPILGAFL
ASWVWYMPFWFIPVVSLASFFLVLFFVPKPKDKDDEKQTLKNFAKSVQEIFKREGRWLVSTFVIGGIIMFLLFGVLFYLS
DTLEKKHQIDGIAKGALLSIPLLFLSVSSYLAGKLIGNDKIRMRICVLIGMILLALSFAGLWWNHSFYPLFLFMSIGGIG
IGIALPSLDALITEGIEKEERGTISSFYNSMRFIGVALGPPVFAYMMTNAGWLIFIVSLLCSLAALALVLFNIDPKEDES
EAAKTV

Specific function: Involved in secretion of bacillibactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Caenorhabditis elegans, GI193209775, Length=207, Percent_Identity=27.536231884058, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322071, Length=192, Percent_Identity=29.6875, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44360; Mature: 44228

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
>Mature Secondary Structure 
SRKKDMKSIFALSSVPLVMTLGNSMLIPVLPVIEKKLNISSFQVSLIITVYSIVAIVCI
CCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
PITGYMSDRFGRKKIMLPCLLIAGAGGALAGLASTFFNDPFAMILAGRVLQGIGSAGAAP
HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCH
IVMPFIGDLFQNDEEISAGLGDIETANTAGKVLSPILGAFLASWVWYMPFWFIPVVSLAS
HHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLVLFFVPKPKDKDDEKQTLKNFAKSVQEIFKREGRWLVSTFVIGGIIMFLLFGVLFYL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SDTLEKKHQIDGIAKGALLSIPLLFLSVSSYLAGKLIGNDKIRMRICVLIGMILLALSFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GLWWNHSFYPLFLFMSIGGIGIGIALPSLDALITEGIEKEERGTISSFYNSMRFIGVALG
HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHC
PPVFAYMMTNAGWLIFIVSLLCSLAALALVLFNIDPKEDESEAAKTV
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]