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The map label for this gene is cheD

Identifier: 52785626

GI number: 52785626

Start: 1821170

End: 1821676

Strand: Direct

Name: cheD

Synonym: BLi01867

Alternate gene names: 52785626

Gene position: 1821170-1821676 (Clockwise)

Preceding gene: 52785625

Following gene: 52785627

Centisome position: 43.13

GC content: 46.94

Gene sequence:

>507_bases
ATGAAAATCTTAGAAAAAGAAACATCGATTATCAGAGTGGGAATTGCCGATGTAAAAATCGTCCGCACTCCCGACAAGAT
CAGAACATCGGGTCTCGGTTCGTGCGTCGGGCTCGTGCTGTATGATTTGGAAGCAAAGACGGCCGGTCTCGTCCACGTCA
TGCTTCCGGACTCTTCCTTATCCAAGACGCCGGACATCAACGTGGCAAAATACGCGGACACAGCCGTCGAAGCGACGGTC
AAGATGCTGCTTGAAGCCGGATGCCGAAAATACGCTTTGAAAGCGAAAATGGCCGGAGGAGCCGAAATGTTTAAATTTAA
GATGACAAATGATTTGATGAAAGTCGGGCCAAGAAATGTGCTTGCGATTAAAAAACATCTATCTCTCTTAAACATTCCGA
TTGTAAGCGAGGATACAGGCGGAAACAGCGGAAGGACGATCGAGTTCGATCCGCAATCAGCTGAACTTGTCATCCGGACA
GTTAAACAAGGTGTAACAACGATTTAA

Upstream 100 bases:

>100_bases
TTTTTGACGAGGAGCACAACCGGAAAGTTAAAGCGCATTTGTTCCTTCTGCCGGACTATGATTCTTTTGAAAAGCTCTTT
CATGCATTGGGTGCAGCGCT

Downstream 100 bases:

>100_bases
TAAGCAATATAGGGGGATAAAGATGCAATCCTTGAACTATGAAGATCAGATGCTTTGGTCGCGGTGGAAAGAATGGAAAG
ATCCTCAGGCAGGCGATGAT

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKILEKETSIIRVGIADVKIVRTPDKIRTSGLGSCVGLVLYDLEAKTAGLVHVMLPDSSLSKTPDINVAKYADTAVEATV
KMLLEAGCRKYALKAKMAGGAEMFKFKMTNDLMKVGPRNVLAIKKHLSLLNIPIVSEDTGGNSGRTIEFDPQSAELVIRT
VKQGVTTI

Sequences:

>Translated_168_residues
MKILEKETSIIRVGIADVKIVRTPDKIRTSGLGSCVGLVLYDLEAKTAGLVHVMLPDSSLSKTPDINVAKYADTAVEATV
KMLLEAGCRKYALKAKMAGGAEMFKFKMTNDLMKVGPRNVLAIKKHLSLLNIPIVSEDTGGNSGRTIEFDPQSAELVIRT
VKQGVTTI
>Mature_168_residues
MKILEKETSIIRVGIADVKIVRTPDKIRTSGLGSCVGLVLYDLEAKTAGLVHVMLPDSSLSKTPDINVAKYADTAVEATV
KMLLEAGCRKYALKAKMAGGAEMFKFKMTNDLMKVGPRNVLAIKKHLSLLNIPIVSEDTGGNSGRTIEFDPQSAELVIRT
VKQGVTTI

Specific function: Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED_BACLD (Q65JK2)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_079040.1
- RefSeq:   YP_091455.1
- HSSP:   Q9X005
- ProteinModelPortal:   Q65JK2
- SMR:   Q65JK2
- STRING:   Q65JK2
- EnsemblBacteria:   EBBACT00000057279
- EnsemblBacteria:   EBBACT00000060794
- GeneID:   3031060
- GeneID:   3101157
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi01867
- KEGG:   bli:BL01247
- NMPDR:   fig|279010.5.peg.2571
- eggNOG:   COG1871
- GeneTree:   EBGT00050000001785
- HOGENOM:   HBG531149
- OMA:   GGAAMFK
- ProtClustDB:   CLSK2392229
- BioCyc:   BLIC279010-1:BLI01867-MONOMER
- BioCyc:   BLIC279010:BL01247-MONOMER
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 18131; Mature: 18131

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILEKETSIIRVGIADVKIVRTPDKIRTSGLGSCVGLVLYDLEAKTAGLVHVMLPDSSL
CCCCCCCCCEEEEEECEEEEEECCHHHHHCCCHHHHHHHHEECCCCCCCEEEEEECCCCC
SKTPDINVAKYADTAVEATVKMLLEAGCRKYALKAKMAGGAEMFKFKMTNDLMKVGPRNV
CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCHH
LAIKKHLSLLNIPIVSEDTGGNSGRTIEFDPQSAELVIRTVKQGVTTI
HHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKILEKETSIIRVGIADVKIVRTPDKIRTSGLGSCVGLVLYDLEAKTAGLVHVMLPDSSL
CCCCCCCCCEEEEEECEEEEEECCHHHHHCCCHHHHHHHHEECCCCCCCEEEEEECCCCC
SKTPDINVAKYADTAVEATVKMLLEAGCRKYALKAKMAGGAEMFKFKMTNDLMKVGPRNV
CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCHH
LAIKKHLSLLNIPIVSEDTGGNSGRTIEFDPQSAELVIRTVKQGVTTI
HHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA