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The map label for this gene is ylxM

Identifier: 52785576

GI number: 52785576

Start: 1777046

End: 1777369

Strand: Direct

Name: ylxM

Synonym: BLi01817

Alternate gene names: NA

Gene position: 1777046-1777369 (Clockwise)

Preceding gene: 52785575

Following gene: 52785577

Centisome position: 42.08

GC content: 39.81

Gene sequence:

>324_bases
ATGACGCTTGAAAAAACAACGAGAATGAATTACTTATTCGATTTCTATCAGACGTTGTTGACATCAAAACAAAAAAGCTA
CATGTCGCTTTACTACTTAGACGATTTCTCCCTTGGCGAAATAGCTGAAGAATATCATGTCTCAAGGCAGGCGGTCTATG
ACAATATCAAACGGACCGAAGCCATGCTTGAGCAATATGAAGAAAAGCTACTTTTGTTTAAAAAATTTCAAGAGCGCAAA
AAGATTTTTGAAGCGCTGAGAAAGCTGACTGACGGTCAGCCTGAGGCGGAGTCCCTGATTGATGCGCTTGAGAAATTAGA
TTAG

Upstream 100 bases:

>100_bases
TTGCCGTCCGGTATGACAAGATAAAAACTTGACAGATCAAATATTTCAGCGTAAACTAGTGTATCGTAAAGGGATTTGAC
TTAACAAAGGGGAGAGTCTC

Downstream 100 bases:

>100_bases
GAGGCGGCACTTAATATGGCATTCGAAGGATTAGCCGACCGACTGCAGCAAACGATCTCAAAAATCCGCGGAAAAGGAAA
GGTAACGGAGCAAGACGTCA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTLEKTTRMNYLFDFYQTLLTSKQKSYMSLYYLDDFSLGEIAEEYHVSRQAVYDNIKRTEAMLEQYEEKLLLFKKFQERK
KIFEALRKLTDGQPEAESLIDALEKLD

Sequences:

>Translated_107_residues
MTLEKTTRMNYLFDFYQTLLTSKQKSYMSLYYLDDFSLGEIAEEYHVSRQAVYDNIKRTEAMLEQYEEKLLLFKKFQERK
KIFEALRKLTDGQPEAESLIDALEKLD
>Mature_106_residues
TLEKTTRMNYLFDFYQTLLTSKQKSYMSLYYLDDFSLGEIAEEYHVSRQAVYDNIKRTEAMLEQYEEKLLLFKKFQERKK
IFEALRKLTDGQPEAESLIDALEKLD

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2321_BACLD (Q65JQ2)

Other databases:

- EMBL:   CP000002
- EMBL:   AE017333
- RefSeq:   YP_078990.2
- RefSeq:   YP_091405.1
- HSSP:   P67248
- ProteinModelPortal:   Q65JQ2
- SMR:   Q65JQ2
- STRING:   Q65JQ2
- EnsemblBacteria:   EBBACT00000055441
- EnsemblBacteria:   EBBACT00000061361
- GeneID:   3030985
- GeneID:   3100681
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi01817
- KEGG:   bli:BL02321
- NMPDR:   fig|279010.5.peg.2521
- eggNOG:   COG2739
- GeneTree:   EBGT00050000002610
- HOGENOM:   HBG427419
- ProtClustDB:   PRK00118
- BioCyc:   BLIC279010-1:BLI01817-MONOMER
- HAMAP:   MF_00245
- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04297 UPF0122; SSF88659 Sigma_r3_r4

EC number: NA

Molecular weight: Translated: 12870; Mature: 12739

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEKTTRMNYLFDFYQTLLTSKQKSYMSLYYLDDFSLGEIAEEYHVSRQAVYDNIKRTE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AMLEQYEEKLLLFKKFQERKKIFEALRKLTDGQPEAESLIDALEKLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TLEKTTRMNYLFDFYQTLLTSKQKSYMSLYYLDDFSLGEIAEEYHVSRQAVYDNIKRTE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AMLEQYEEKLLLFKKFQERKKIFEALRKLTDGQPEAESLIDALEKLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA